Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Drechmeria_20coniospora_20[genbank_20GCA_5F001625195.1_202016-04-24] 28 sequences; 32,831,003 total letters Query= NC_004156.2 Length=231621 Score E Sequences producing significant alignments: (Bits) Value seq3 190 3e-43 >seq3 Length=9751215 Score = 190 bits (210), Expect = 3e-43 Identities = 345/497 (69%), Gaps = 6/497 (1%) Strand=Plus/Plus Query 96876 CAGGGCGGCAATAAACGGCCAGGCGCTATAGCCGTCTACTTGGAACCTTGGCACGCGGAC 96935 ||||||||||| || ||||| ||||| | ||| ||||| ||||||| |||||||| ||| Sbjct 5389363 CAGGGCGGCAACAAGCGGCCGGGCGCCTTCGCCATCTACCTGGAACCGTGGCACGCCGAC 5389422 Query 96936 GTTTTTGACTTTATCGAGATGCGCAAAAACTCTGGCTTTGAAGAGGCACGAGCCAGGGAC 96995 |||||||| ||| |||| ||||||| ||| ||| || |||| || || | ||| Sbjct 5389423 GTTTTTGAGTTTCTCGACCTGCGCAAGAACCACGGCAAGGAGGAGGTGCGCGCGCGCGAC 5389482 Query 96996 TTGTTTTATGCACTCTGGGTGCCAGATTTGTTCATGAAGCGCGTCAACGACGGTGGCTAC 97055 |||| || |||||| | || || | ||||||||||||||| | | ||| || Sbjct 5389483 CTGTTCCTCGCGCTCTGGATCCCCGACCTCTTCATGAAGCGCGTCGAGAAGAACGGCGAC 5389542 Query 97056 TGGAGCCTAATGTGCCCCGACTCGTCACCCGGTCTGTCCGATTGCTGGGGCGAAGAGTTT 97115 |||| || ||||||||| || || ||||| || |||| |||| ||||| ||||| Sbjct 5389543 TGGACGCTCATGTGCCCCAACGAGTGCCCCGGCCTCGCCGACTGCTACGGCGACGAGTTC 5389602 Query 97116 GAGGCCAAGTACACGGCCTACGAGCAAGAGGGCCG-ATACGTGAGACGAGTCGATGCACG 97174 ||||| |||| ||||||| |||||||| || ||||| ||| || | Sbjct 5389603 GAGGCGCTGTACGAAAAGTACGAGCGCGAGGGCCGCGGCCGCAAGACG-GTCCGCGC-CC 5389660 Query 97175 AGAA-CTGTGGAAGGCCATCGTGACGGCTCAGGTAGAGACTGGAACTCCGTACATTCTCT 97233 |||| || ||| | | ||| | ||| ||| ||||| || | || | ||| || | Sbjct 5389661 AGAAGCTCTGGTACTCGATCCTCGAGGCCCAGACGGAGACGGGCAACCCCTTCATGCTGT 5389720 Query 97234 ACAAGGATACCGTG-AATCGCAACAGCAACCAACGCCACTTGGGCACCATCAAGGGCTCC 97292 ||||||| |||| || ||||| |||||||| || | || || ||| ||||| Sbjct 5389721 ACAAGGA-CGCGTGCAACCGCAAGAGCAACCAGAAGAACCTCGGGACGATCCGCAGCTCC 5389779 Query 97293 AATCTGTGCACGGAAATTGTAGAGTACGCCTCTCCGGACGAGACGGCAGTTTGCGTTCTG 97352 || |||||||| || || | |||||| | | || |||||| ||| || ||| || Sbjct 5389780 AACCTGTGCACCGAGATCATCGAGTACTCGGCGCCCGACGAGGTGGCCGTCTGCAACCTC 5389839 Query 97353 GCATCGGTCAATCTGCC 97369 || ||| || ||||| Sbjct 5389840 GCGTCGCTCGCCCTGCC 5389856 Score = 165 bits (182), Expect = 1e-35 Identities = 213/289 (74%), Gaps = 4/289 (1%) Strand=Plus/Minus Query 125019 ATTTGGGAAATGTACAAAAAGGCTCAGGCCTCCTTTTGGACGGTCGAAGAGGTCGATCTG 125078 || ||| |||||||||| ||||| |||| ||||| ||||||| ||||||| ||||||| Sbjct 2599514 ATCTGGCAAATGTACAAGAAGGCCGAGGCGTCCTTCTGGACGGCCGAAGAGATCGATCTT 2599455 Query 125079 TCCAAGGACCTGTACGATTGGGAGACTCGTTTGACTGAAACTGAGCGAGAGTTTATATCG 125138 |||||||| || |||| ||| | | ||||||| ||| |||||| | || | ||| Sbjct 2599454 TCCAAGGATTTGCACGACTGGAACAACCGTTTGAATGACGATGAGCGGTATTTCGTCTCG 2599395 Query 125139 CACATTTTGGCCTTCTTTGCCGGCTCCGATGGAATCGTCAACGACAATC-TGTTGACACG 125197 |||||| | || ||||| |||| || || |||||||||||||| || | ||| || ||| Sbjct 2599394 CACATTCTCGCTTTCTTCGCCGCTTCGGACGGAATCGTCAACGAGAACCTTGTCGA-ACG 2599336 Query 125198 ATTCTCTCAAGAGTTGACCATTCCAGAGGTGTCG-TGCTTTTACGGATTCCAAATCATGA 125256 ||| ||| || || || |||| ||| ||||| ||||| ||||||||||||| Sbjct 2599335 TTTCAGCGGCGAGGTGCAAATCCCCGAGG-CTCGCTGCTTCTACGGTTTCCAAATCATGA 2599277 Query 125257 TTGAGAACGTGCACTCGGAAATGTACTCTACACTGATTGACATGTACAT 125305 | || || | ||||| || | ||||| |||| ||| |||||| Sbjct 2599276 TGGAAAATATCCACTCCGAGACCTACTCGCTCTTGATCGACTCGTACAT 2599228 Score = 138 bits (152), Expect = 2e-27 Identities = 348/517 (67%), Gaps = 29/517 (6%) Strand=Plus/Minus Query 125348 CACGGTGCCGTCTATACGTAAAAAGGCTCAATGGGTGATTCGGTGGATCGATGACGACAA 125407 ||| || || | || || || |||||| | |||| | || |||||| | ||| | | Sbjct 2599114 CACAGTTCCTTGCATCCGCAAGAAGGCTGATTGGGCCCTGCGTTGGATCCAAGACAAGGA 2599055 Query 125408 GTCTTCGTACGCCGACAGACTGGTGGCATTCGCCGCCGTAGAGGGCATCTTCTTTTCGGG 125467 ||| ||| |||| | ||||| || || || |||||||| || ||||||||||| || Sbjct 2599054 GTCCACGTTCGCCCAAAGACTTGTTGCCTTTGCCGCCGTCGAAGGCATCTTCTTCAGCGG 2598995 Query 125468 TAGTTTTGCGGCCATCTTTTGGCTCAAGAAGCGCGGACTCATGCCCGGACTGACGCACAG 125527 | ||| || | ||||| ||||| ||||||||||| |||||||| || ||||| | Sbjct 2598994 TGCTTTCGCCTCAATCTTCTGGCTGAAGAAGCGCGGTCTCATGCCTGGTCTGACATTCTC 2598935 Query 125528 TAACGAGTTTATATCTCGAGACGAGGGCCTACACTGTGACTTTGCCATTCTACTGTTTCG 125587 |||||| | || || || || ||||| || ||| || |||| | | | ||||| | Sbjct 2598934 CAACGAGCTCATCTCGCGTGATGAGGGTCTTCACACCGATTTTG-CGTGC--CTGTTGC- 2598879 Query 125588 CAACTATCTGCGTCCCGAGTGCAGATCCAGCGATGAAAAGGTCATCA---ACATTGTAAC 125644 || || | | | | | ||||| | |||||||||| |||| | || Sbjct 2598878 -----ATTCGCACCTCAACAACCGGGCCAGC---AAGAAGGTCATCAACGACATCATCAC 2598827 Query 125645 CGATGCCGTGAGGATAGAACAAGAGTTTCTAACCGAATCCCTACCGGTCAGC-ATGATTG 125703 ||| ||||| | || || || ||||| || ||||| |||| || | || || | | Sbjct 2598826 CGACGCCGTCACCATTGAGCAGGAGTTCCTCACCGAGGCCCT-CCCATGTGCTCTGCTCG 2598768 Query 125704 GCATGAACTGCAAGC-TAATGTGCGAGTACATAGAGTTTGTGGCAGATCGTCTACTGTAC 125762 ||||||| ||| | | | ||| ||||||| ||||| || || |||||||| || Sbjct 2598767 GCATGAA-TGCCACCTTGATGAAGCAGTACATCGAGTTCGTTGCCGATCGTCTCCT---- 2598713 Query 125763 GAGTTG--ATTGGC--CG-CAAGATTTACAACGCCAAGAATCCCTTTGATTTCATGACCA 125817 |||| | ||| || ||| | ||||| | ||| ||||| || |||||| | Sbjct 2598712 -TGTTGCTCTCGGCAACGAGAAGGTGTACAAATCGTCGAACCCCTTCGACTTCATGGAGA 2598654 Query 125818 GCATATCACTAGAGGGTAAGACCAACTTTTTCGAGAA 125854 ||| || || | || |||||||| || |||||||| Sbjct 2598653 ACATCTCCCTCGGTGGCAAGACCAATTTCTTCGAGAA 2598617 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 741058940629280