Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Drechmeria_20coniospora_20[genbank_20GCA_5F001625195.1_202016-04-24]
28 sequences; 32,831,003 total letters
Query= NC_004156.2
Length=231621
Score E
Sequences producing significant alignments: (Bits) Value
seq3 190 3e-43
>seq3
Length=9751215
Score = 190 bits (210), Expect = 3e-43
Identities = 345/497 (69%), Gaps = 6/497 (1%)
Strand=Plus/Plus
Query 96876 CAGGGCGGCAATAAACGGCCAGGCGCTATAGCCGTCTACTTGGAACCTTGGCACGCGGAC 96935
||||||||||| || ||||| ||||| | ||| ||||| ||||||| |||||||| |||
Sbjct 5389363 CAGGGCGGCAACAAGCGGCCGGGCGCCTTCGCCATCTACCTGGAACCGTGGCACGCCGAC 5389422
Query 96936 GTTTTTGACTTTATCGAGATGCGCAAAAACTCTGGCTTTGAAGAGGCACGAGCCAGGGAC 96995
|||||||| ||| |||| ||||||| ||| ||| || |||| || || | |||
Sbjct 5389423 GTTTTTGAGTTTCTCGACCTGCGCAAGAACCACGGCAAGGAGGAGGTGCGCGCGCGCGAC 5389482
Query 96996 TTGTTTTATGCACTCTGGGTGCCAGATTTGTTCATGAAGCGCGTCAACGACGGTGGCTAC 97055
|||| || |||||| | || || | ||||||||||||||| | | ||| ||
Sbjct 5389483 CTGTTCCTCGCGCTCTGGATCCCCGACCTCTTCATGAAGCGCGTCGAGAAGAACGGCGAC 5389542
Query 97056 TGGAGCCTAATGTGCCCCGACTCGTCACCCGGTCTGTCCGATTGCTGGGGCGAAGAGTTT 97115
|||| || ||||||||| || || ||||| || |||| |||| ||||| |||||
Sbjct 5389543 TGGACGCTCATGTGCCCCAACGAGTGCCCCGGCCTCGCCGACTGCTACGGCGACGAGTTC 5389602
Query 97116 GAGGCCAAGTACACGGCCTACGAGCAAGAGGGCCG-ATACGTGAGACGAGTCGATGCACG 97174
||||| |||| ||||||| |||||||| || ||||| ||| || |
Sbjct 5389603 GAGGCGCTGTACGAAAAGTACGAGCGCGAGGGCCGCGGCCGCAAGACG-GTCCGCGC-CC 5389660
Query 97175 AGAA-CTGTGGAAGGCCATCGTGACGGCTCAGGTAGAGACTGGAACTCCGTACATTCTCT 97233
|||| || ||| | | ||| | ||| ||| ||||| || | || | ||| || |
Sbjct 5389661 AGAAGCTCTGGTACTCGATCCTCGAGGCCCAGACGGAGACGGGCAACCCCTTCATGCTGT 5389720
Query 97234 ACAAGGATACCGTG-AATCGCAACAGCAACCAACGCCACTTGGGCACCATCAAGGGCTCC 97292
||||||| |||| || ||||| |||||||| || | || || ||| |||||
Sbjct 5389721 ACAAGGA-CGCGTGCAACCGCAAGAGCAACCAGAAGAACCTCGGGACGATCCGCAGCTCC 5389779
Query 97293 AATCTGTGCACGGAAATTGTAGAGTACGCCTCTCCGGACGAGACGGCAGTTTGCGTTCTG 97352
|| |||||||| || || | |||||| | | || |||||| ||| || ||| ||
Sbjct 5389780 AACCTGTGCACCGAGATCATCGAGTACTCGGCGCCCGACGAGGTGGCCGTCTGCAACCTC 5389839
Query 97353 GCATCGGTCAATCTGCC 97369
|| ||| || |||||
Sbjct 5389840 GCGTCGCTCGCCCTGCC 5389856
Score = 165 bits (182), Expect = 1e-35
Identities = 213/289 (74%), Gaps = 4/289 (1%)
Strand=Plus/Minus
Query 125019 ATTTGGGAAATGTACAAAAAGGCTCAGGCCTCCTTTTGGACGGTCGAAGAGGTCGATCTG 125078
|| ||| |||||||||| ||||| |||| ||||| ||||||| ||||||| |||||||
Sbjct 2599514 ATCTGGCAAATGTACAAGAAGGCCGAGGCGTCCTTCTGGACGGCCGAAGAGATCGATCTT 2599455
Query 125079 TCCAAGGACCTGTACGATTGGGAGACTCGTTTGACTGAAACTGAGCGAGAGTTTATATCG 125138
|||||||| || |||| ||| | | ||||||| ||| |||||| | || | |||
Sbjct 2599454 TCCAAGGATTTGCACGACTGGAACAACCGTTTGAATGACGATGAGCGGTATTTCGTCTCG 2599395
Query 125139 CACATTTTGGCCTTCTTTGCCGGCTCCGATGGAATCGTCAACGACAATC-TGTTGACACG 125197
|||||| | || ||||| |||| || || |||||||||||||| || | ||| || |||
Sbjct 2599394 CACATTCTCGCTTTCTTCGCCGCTTCGGACGGAATCGTCAACGAGAACCTTGTCGA-ACG 2599336
Query 125198 ATTCTCTCAAGAGTTGACCATTCCAGAGGTGTCG-TGCTTTTACGGATTCCAAATCATGA 125256
||| ||| || || || |||| ||| ||||| ||||| |||||||||||||
Sbjct 2599335 TTTCAGCGGCGAGGTGCAAATCCCCGAGG-CTCGCTGCTTCTACGGTTTCCAAATCATGA 2599277
Query 125257 TTGAGAACGTGCACTCGGAAATGTACTCTACACTGATTGACATGTACAT 125305
| || || | ||||| || | ||||| |||| ||| ||||||
Sbjct 2599276 TGGAAAATATCCACTCCGAGACCTACTCGCTCTTGATCGACTCGTACAT 2599228
Score = 138 bits (152), Expect = 2e-27
Identities = 348/517 (67%), Gaps = 29/517 (6%)
Strand=Plus/Minus
Query 125348 CACGGTGCCGTCTATACGTAAAAAGGCTCAATGGGTGATTCGGTGGATCGATGACGACAA 125407
||| || || | || || || |||||| | |||| | || |||||| | ||| | |
Sbjct 2599114 CACAGTTCCTTGCATCCGCAAGAAGGCTGATTGGGCCCTGCGTTGGATCCAAGACAAGGA 2599055
Query 125408 GTCTTCGTACGCCGACAGACTGGTGGCATTCGCCGCCGTAGAGGGCATCTTCTTTTCGGG 125467
||| ||| |||| | ||||| || || || |||||||| || ||||||||||| ||
Sbjct 2599054 GTCCACGTTCGCCCAAAGACTTGTTGCCTTTGCCGCCGTCGAAGGCATCTTCTTCAGCGG 2598995
Query 125468 TAGTTTTGCGGCCATCTTTTGGCTCAAGAAGCGCGGACTCATGCCCGGACTGACGCACAG 125527
| ||| || | ||||| ||||| ||||||||||| |||||||| || ||||| |
Sbjct 2598994 TGCTTTCGCCTCAATCTTCTGGCTGAAGAAGCGCGGTCTCATGCCTGGTCTGACATTCTC 2598935
Query 125528 TAACGAGTTTATATCTCGAGACGAGGGCCTACACTGTGACTTTGCCATTCTACTGTTTCG 125587
|||||| | || || || || ||||| || ||| || |||| | | | ||||| |
Sbjct 2598934 CAACGAGCTCATCTCGCGTGATGAGGGTCTTCACACCGATTTTG-CGTGC--CTGTTGC- 2598879
Query 125588 CAACTATCTGCGTCCCGAGTGCAGATCCAGCGATGAAAAGGTCATCA---ACATTGTAAC 125644
|| || | | | | | ||||| | |||||||||| |||| | ||
Sbjct 2598878 -----ATTCGCACCTCAACAACCGGGCCAGC---AAGAAGGTCATCAACGACATCATCAC 2598827
Query 125645 CGATGCCGTGAGGATAGAACAAGAGTTTCTAACCGAATCCCTACCGGTCAGC-ATGATTG 125703
||| ||||| | || || || ||||| || ||||| |||| || | || || | |
Sbjct 2598826 CGACGCCGTCACCATTGAGCAGGAGTTCCTCACCGAGGCCCT-CCCATGTGCTCTGCTCG 2598768
Query 125704 GCATGAACTGCAAGC-TAATGTGCGAGTACATAGAGTTTGTGGCAGATCGTCTACTGTAC 125762
||||||| ||| | | | ||| ||||||| ||||| || || |||||||| ||
Sbjct 2598767 GCATGAA-TGCCACCTTGATGAAGCAGTACATCGAGTTCGTTGCCGATCGTCTCCT---- 2598713
Query 125763 GAGTTG--ATTGGC--CG-CAAGATTTACAACGCCAAGAATCCCTTTGATTTCATGACCA 125817
|||| | ||| || ||| | ||||| | ||| ||||| || |||||| |
Sbjct 2598712 -TGTTGCTCTCGGCAACGAGAAGGTGTACAAATCGTCGAACCCCTTCGACTTCATGGAGA 2598654
Query 125818 GCATATCACTAGAGGGTAAGACCAACTTTTTCGAGAA 125854
||| || || | || |||||||| || ||||||||
Sbjct 2598653 ACATCTCCCTCGGTGGCAAGACCAATTTCTTCGAGAA 2598617
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 741058940629280
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |