Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Drechmeria_20coniospora_20[genbank_20GCA_5F001625195.1_202016-04-24]
28 sequences; 32,831,003 total letters
Query= NC_006998.1
Length=194711
Score E
Sequences producing significant alignments: (Bits) Value
seq3 147 3e-30
>seq3
Length=9751215
Score = 147 bits (162), Expect = 3e-30
Identities = 451/688 (66%), Gaps = 22/688 (3%)
Strand=Plus/Minus
Query 63183 GGACACATCAACGACCACTCTCCGTCATCCTTCACTCGTTTCATAAAGAGATCAGGAATC 63242
|| ||||| | || ||| || |||| | || || || ||||| ||||| || || |||
Sbjct 5389559 GGGCACATGAGCGTCCAGTCGCCGTTCTTCTCGACGCGCTTCATGAAGAGGTCGGGGATC 5389500
Query 63243 CAAAGAGCTATAAATAGATCTCTGGTTCTATGTTCCTCGTTTCCTGTATTCTTTTTAAGA 63302
|| || || | || || || | | | ||||| || || ||||| ||
Sbjct 5389499 CAGAGCGCGAGGAACAGGTCGCGCGCGCGCACCTCCTCCTTGCCGTGGTTCTTGCGCAGG 5389440
Query 63303 TCGAGGAACGCCATAATATCAGAATGCCACGGTTCCAAGTATATGGCCATAACTCCAGGC 63362
||||| ||| | | || || | ||||||||||||| ||| ||||| | | || |||
Sbjct 5389439 TCGAGAAACTCAAAAACGTCGGCGTGCCACGGTTCCAGGTAGATGGCGAAGGCGCCCGGC 5389380
Query 63363 CGTTTGTTTCCTCCCTGATCTATGTATCTAGCGGTGTTATTATAAACTCTCAACATTGGA 63422
|| ||||| || ||||| || | ||| | || ||||| || | || | | ||| ||
Sbjct 5389379 CGCTTGTTGCCGCCCTGGTCGACGTACCGGGCCGTGTTGTTGAAGACGCGAAGCATGGGC 5389320
Query 63423 ATAATACCGTTTGATATACCATTGGTACCGGAGATATAGCTTCCACTGGCACGAATATTA 63482
| || ||||| || |||| ||||| |||| || ||| ||| |||| || ||
Sbjct 5389319 GTGATGCCGTTGGAGGTACCGTTGGTGCCGGCAATGTAGGATCCGGTGGCGCGGATGCGG 5389260
Query 63483 CTAATTGATAGACCTATTCCCCCTGCCATTTTAGAGATTAATGCGCATCGT-TTTAACGT 63541
|| || || || || || ||||| || ||||| | ||||| ||| || | |||
Sbjct 5389259 TGGATGTTGAGGCCGATGCCGCCGGCCATCTTGGAGATCATGGCGCA-CGTCTTGAGCGT 5389201
Query 63542 GTCATAGATACCCTCTATGCTATCATCGATCATGTTAAGTAGAAAACAGCTAGACATTTG 63601
||| ||||| ||||| ||||| || || |||||| | || || || |||| ||
Sbjct 5389200 GTCGTAGATGCCCTCGATGCTGTCGTCCTTCATGTCGACGAGGAAGCACGACGACAGCTG 5389141
Query 63602 ---GTGACGACTAGTTCCCGCATTAAATAAGGTAGGAGAAGCGTGCGTAAACCATTTTTC 63658
|| || | || || || || || | || || || |||||||| || ||| || |
Sbjct 5389140 CGCCTG-CGGC--GTGCCGGCGTTGAAGAGCGTCGGCGAGGCGTGCGTGAA-CATCTTGC 5389085
Query 63659 -AGAAAGTAGATTGTACGTCTCAATAGCTGAGTCTATAT------CCCATTGATGAATTC 63711
|| | |||||||||||||| || | || || | |||| |||| |
Sbjct 5389084 TCGACATGAGATTGTACGTCTCGATGACGCGCTCGATGTTGTCGCCCCA--GATG----C 5389031
Query 63712 CTACTGCGACACGCATTAACATGTGCTGAGGTCTTTCAACGATCTTGTTGTTTATTTTCA 63771
| || | || ||||| | ||||||||| |||| || ||||||||| ||| | || |
Sbjct 5389030 CGACCGACACGCGCATGATCATGTGCTGCGGTCGCTCGACGATCTTGCCGTTGAGCTTGA 5388971
Query 63772 ACAAGTAGGATTTTTCCAAAGTTTTAAAACCAAAATAGTTGTATGAAAAGTCTCGTTCGT 63831
| ||||||| || | ||| || || ||||| || | ||| ||||| || ||||
Sbjct 5388970 GGAGGTAGGATCGCTCGAGAGTCTTGAAGCCAAAGTACTGGTAGTTGAAGTCGCGGTCGT 5388911
Query 63832 AAATAATAACCGAGTTGAGTTTATCCTT 63859
| | || |||||| ||| | |||||
Sbjct 5388910 AGACGATGGCCGAGTCGAGCTCCTCCTT 5388883
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 622946981968480
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