Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Drechmeria_20coniospora_20[genbank_20GCA_5F001625195.1_202016-04-24] 28 sequences; 32,831,003 total letters Query= NC_008168.1 Length=104710 Score E Sequences producing significant alignments: (Bits) Value seq3 140 2e-28 >seq3 Length=9751215 Score = 140 bits (154), Expect = 2e-28 Identities = 88/95 (93%), Gaps = 5/95 (5%) Strand=Plus/Plus Query 25902 AAGCCCGTTCCCTTGGCTGTGGTTTCGCTAGATAGTAGATAGGG-----GGTAATCTCGT 25956 |||||||||||||||||||||||||||||||||||||||||||| || |||||||| Sbjct 3349308 AAGCCCGTTCCCTTGGCTGTGGTTTCGCTAGATAGTAGATAGGGACAGTGGGAATCTCGT 3349367 Query 25957 TAATCCTTTCATGCGCGTCACTAATTAGATGACGA 25991 |||||| |||||||||||||||||||||||||||| Sbjct 3349368 TAATCCATTCATGCGCGTCACTAATTAGATGACGA 3349402 Score = 140 bits (154), Expect = 2e-28 Identities = 88/95 (93%), Gaps = 5/95 (5%) Strand=Plus/Plus Query 25902 AAGCCCGTTCCCTTGGCTGTGGTTTCGCTAGATAGTAGATAGGG-----GGTAATCTCGT 25956 |||||||||||||||||||||||||||||||||||||||||||| || |||||||| Sbjct 3853250 AAGCCCGTTCCCTTGGCTGTGGTTTCGCTAGATAGTAGATAGGGACAGTGGGAATCTCGT 3853309 Query 25957 TAATCCTTTCATGCGCGTCACTAATTAGATGACGA 25991 |||||| |||||||||||||||||||||||||||| Sbjct 3853310 TAATCCATTCATGCGCGTCACTAATTAGATGACGA 3853344 Score = 96.9 bits (106), Expect = 2e-15 Identities = 153/217 (71%), Gaps = 2/217 (1%) Strand=Plus/Plus Query 38103 CGCAACACCAAATGAAGAGTGCTCTCCTTTTGAATATTGTAATCAGACAAAACACGTTCG 38162 |||| || | ||| |||||||||||||| || || ||||| || ||| ||| || Sbjct 4592880 CGCAGTACAAGATGTAGAGTGCTCTCCTTCTGGATGTTGTAGTCGCTCAAGGTACGGCCG 4592939 Query 38163 TCGTCTAATTGTTTTCCGGCAAATATTAGGCGTTGTTGATCGGAGGGGACGCCTTCTTTG 38222 || || | || || ||||| || || ||||| || || |||| |||| ||| || ||| Sbjct 4592940 TCCTCGAGCTGCTTGCCGGCGAAAATCAGGCGCTGCTGGTCGGGCGGGATGCCCTCCTTG 4592999 Query 38223 TCCATAATTTTTTGCTTCACATTCTGGACAGTATCTCCAC-TTTCAACTTCTAATGTAAT 38281 ||| ||| || ||| || || | || || || | || ||| || || || || || Sbjct 4593000 TCCTGAATCTTGCTCTTTACGTTGTCGATTGTGTC-CGACGATTCCACCTCCAACGTGAT 4593058 Query 38282 AGTTTTACCCGTCAAGGTTTTCACGAATATCTGCATG 38318 || || || ||||| || || ||||| ||||||||| Sbjct 4593059 CGTCTTGCCGGTCAACGTCTTGACGAAGATCTGCATG 4593095 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 334947085699268