Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Drechmeria_20coniospora_20[genbank_20GCA_5F001625195.1_202016-04-24]
28 sequences; 32,831,003 total letters
Query= NC_008291.1
Length=198050
Score E
Sequences producing significant alignments: (Bits) Value
seq3 147 3e-30
>seq3
Length=9751215
Score = 147 bits (162), Expect = 3e-30
Identities = 478/733 (65%), Gaps = 22/733 (3%)
Strand=Plus/Minus
Query 62993 TCGAACTCGTCTCCCCAAACATTGTCCAGTCCAGGACATTCATCCGGACACATCAACGAC 63052
||||||||||| || | | | | || || || || || | || ||||| | || |
Sbjct 5389604 TCGAACTCGTCGCCGTAGCAGTCGGCGAGGCCGGGGCACTCGTTGGGGCACATGAGCGTC 5389545
Query 63053 CACTCTCCGTCATCCTTCACTCGTTTCATAAAGAGATCAGGAATCCAAAGAGCTATAAAT 63112
|| || |||| | || || || ||||| ||||| || || ||||| || || | ||
Sbjct 5389544 CAGTCGCCGTTCTTCTCGACGCGCTTCATGAAGAGGTCGGGGATCCAGAGCGCGAGGAAC 5389485
Query 63113 AGATCTCTGGTTCTATGTTCCTCGTTTCCTGTATTCTTTTTAAGATCGAGGAACGCCATA 63172
|| || | | | ||||| || || ||||| || ||||| ||| | | |
Sbjct 5389484 AGGTCGCGCGCGCGCACCTCCTCCTTGCCGTGGTTCTTGCGCAGGTCGAGAAACTCAAAA 5389425
Query 63173 ATATCAGAATGCCACGGTTCCAAGTATATGGCCATAACTCCAGGCCGTTTGTTTCCTCCC 63232
| || | ||||||||||||| ||| ||||| | | || ||||| ||||| || |||
Sbjct 5389424 ACGTCGGCGTGCCACGGTTCCAGGTAGATGGCGAAGGCGCCCGGCCGCTTGTTGCCGCCC 5389365
Query 63233 TGATCTATGTATCTAGCGGTGTTATTATAAACTCTCAACATTGGAATAATACCATTGGAT 63292
|| || | ||| | || ||||| || | || | | ||| || | || || |||||
Sbjct 5389364 TGGTCGACGTACCGGGCCGTGTTGTTGAAGACGCGAAGCATGGGCGTGATGCCGTTGGAG 5389305
Query 63293 GTACCATTGGTCCCTGAGATATAGCTTCCACTGGCACGAATATTACTAATTGATAGACCT 63352
||||| ||||| || | || ||| ||| |||| || || || || ||
Sbjct 5389304 GTACCGTTGGTGCCGGCAATGTAGGATCCGGTGGCGCGGATGCGGTGGATGTTGAGGCCG 5389245
Query 63353 ATTCCCCCTGCCATTTTAGAGATTAATGCGCATCGT-TTTAACGTATCATAGATGCCCTC 63411
|| || || ||||| || ||||| | ||||| ||| || | ||| || |||||||||||
Sbjct 5389244 ATGCCGCCGGCCATCTTGGAGATCATGGCGCA-CGTCTTGAGCGTGTCGTAGATGCCCTC 5389186
Query 63412 TATACTATCATCCATCATGTTAAGTAGAAAACAGCTAGACATTTG---GTGACGACTAGT 63468
|| || || ||| |||||| | || || || |||| || || || | ||
Sbjct 5389185 GATGCTGTCGTCCTTCATGTCGACGAGGAAGCACGACGACAGCTGCGCCTG-CGGC--GT 5389129
Query 63469 TCCCGCATTAAATAAGGTAGGAGAAGCGTGAGTAAACCATTTTTC-AGAAAGTAGATTGT 63527
|| || || || | || || || ||||| || || ||| || | || | |||||||
Sbjct 5389128 GCCGGCGTTGAAGAGCGTCGGCGAGGCGTGCGTGAA-CATCTTGCTCGACATGAGATTGT 5389070
Query 63528 ACGTCTCAATAGCTGAGTCTATAT------CCCATTGATGAATTCCTACTGCGACACGCA 63581
||||||| || | || || | |||| |||| || || | || ||||
Sbjct 5389069 ACGTCTCGATGACGCGCTCGATGTTGTCGCCCCA--GATG----CCGACCGACACGCGCA 5389016
Query 63582 TTAACATGTGCTGAGGTCTTTCAACGATCTTGTTGTTTATTTTCAACAAGTAGGATTTTT 63641
| | ||||||||| |||| || ||||||||| ||| | || | | ||||||| |
Sbjct 5389015 TGATCATGTGCTGCGGTCGCTCGACGATCTTGCCGTTGAGCTTGAGGAGGTAGGATCGCT 5388956
Query 63642 CCAAAGTTTTAAAACCAAAATAGTTGTATGAAAAGTCTCGTTCGTAAATAATAACCGAGT 63701
| | ||| || || ||||| || | ||| ||||| || ||||| | || ||||||
Sbjct 5388955 CGAGAGTCTTGAAGCCAAAGTACTGGTAGTTGAAGTCGCGGTCGTAGACGATGGCCGAGT 5388896
Query 63702 TGAGTTTATCCTT 63714
||| | |||||
Sbjct 5388895 CGAGCTCCTCCTT 5388883
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 633631778228800
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |