Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Drechmeria_20coniospora_20[genbank_20GCA_5F001625195.1_202016-04-24] 28 sequences; 32,831,003 total letters Query= NC_008291.1 Length=198050 Score E Sequences producing significant alignments: (Bits) Value seq3 147 3e-30 >seq3 Length=9751215 Score = 147 bits (162), Expect = 3e-30 Identities = 478/733 (65%), Gaps = 22/733 (3%) Strand=Plus/Minus Query 62993 TCGAACTCGTCTCCCCAAACATTGTCCAGTCCAGGACATTCATCCGGACACATCAACGAC 63052 ||||||||||| || | | | | || || || || || | || ||||| | || | Sbjct 5389604 TCGAACTCGTCGCCGTAGCAGTCGGCGAGGCCGGGGCACTCGTTGGGGCACATGAGCGTC 5389545 Query 63053 CACTCTCCGTCATCCTTCACTCGTTTCATAAAGAGATCAGGAATCCAAAGAGCTATAAAT 63112 || || |||| | || || || ||||| ||||| || || ||||| || || | || Sbjct 5389544 CAGTCGCCGTTCTTCTCGACGCGCTTCATGAAGAGGTCGGGGATCCAGAGCGCGAGGAAC 5389485 Query 63113 AGATCTCTGGTTCTATGTTCCTCGTTTCCTGTATTCTTTTTAAGATCGAGGAACGCCATA 63172 || || | | | ||||| || || ||||| || ||||| ||| | | | Sbjct 5389484 AGGTCGCGCGCGCGCACCTCCTCCTTGCCGTGGTTCTTGCGCAGGTCGAGAAACTCAAAA 5389425 Query 63173 ATATCAGAATGCCACGGTTCCAAGTATATGGCCATAACTCCAGGCCGTTTGTTTCCTCCC 63232 | || | ||||||||||||| ||| ||||| | | || ||||| ||||| || ||| Sbjct 5389424 ACGTCGGCGTGCCACGGTTCCAGGTAGATGGCGAAGGCGCCCGGCCGCTTGTTGCCGCCC 5389365 Query 63233 TGATCTATGTATCTAGCGGTGTTATTATAAACTCTCAACATTGGAATAATACCATTGGAT 63292 || || | ||| | || ||||| || | || | | ||| || | || || ||||| Sbjct 5389364 TGGTCGACGTACCGGGCCGTGTTGTTGAAGACGCGAAGCATGGGCGTGATGCCGTTGGAG 5389305 Query 63293 GTACCATTGGTCCCTGAGATATAGCTTCCACTGGCACGAATATTACTAATTGATAGACCT 63352 ||||| ||||| || | || ||| ||| |||| || || || || || Sbjct 5389304 GTACCGTTGGTGCCGGCAATGTAGGATCCGGTGGCGCGGATGCGGTGGATGTTGAGGCCG 5389245 Query 63353 ATTCCCCCTGCCATTTTAGAGATTAATGCGCATCGT-TTTAACGTATCATAGATGCCCTC 63411 || || || ||||| || ||||| | ||||| ||| || | ||| || ||||||||||| Sbjct 5389244 ATGCCGCCGGCCATCTTGGAGATCATGGCGCA-CGTCTTGAGCGTGTCGTAGATGCCCTC 5389186 Query 63412 TATACTATCATCCATCATGTTAAGTAGAAAACAGCTAGACATTTG---GTGACGACTAGT 63468 || || || ||| |||||| | || || || |||| || || || | || Sbjct 5389185 GATGCTGTCGTCCTTCATGTCGACGAGGAAGCACGACGACAGCTGCGCCTG-CGGC--GT 5389129 Query 63469 TCCCGCATTAAATAAGGTAGGAGAAGCGTGAGTAAACCATTTTTC-AGAAAGTAGATTGT 63527 || || || || | || || || ||||| || || ||| || | || | ||||||| Sbjct 5389128 GCCGGCGTTGAAGAGCGTCGGCGAGGCGTGCGTGAA-CATCTTGCTCGACATGAGATTGT 5389070 Query 63528 ACGTCTCAATAGCTGAGTCTATAT------CCCATTGATGAATTCCTACTGCGACACGCA 63581 ||||||| || | || || | |||| |||| || || | || |||| Sbjct 5389069 ACGTCTCGATGACGCGCTCGATGTTGTCGCCCCA--GATG----CCGACCGACACGCGCA 5389016 Query 63582 TTAACATGTGCTGAGGTCTTTCAACGATCTTGTTGTTTATTTTCAACAAGTAGGATTTTT 63641 | | ||||||||| |||| || ||||||||| ||| | || | | ||||||| | Sbjct 5389015 TGATCATGTGCTGCGGTCGCTCGACGATCTTGCCGTTGAGCTTGAGGAGGTAGGATCGCT 5388956 Query 63642 CCAAAGTTTTAAAACCAAAATAGTTGTATGAAAAGTCTCGTTCGTAAATAATAACCGAGT 63701 | | ||| || || ||||| || | ||| ||||| || ||||| | || |||||| Sbjct 5388955 CGAGAGTCTTGAAGCCAAAGTACTGGTAGTTGAAGTCGCGGTCGTAGACGATGGCCGAGT 5388896 Query 63702 TGAGTTTATCCTT 63714 ||| | ||||| Sbjct 5388895 CGAGCTCCTCCTT 5388883 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 633631778228800