Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Drechmeria_20coniospora_20[genbank_20GCA_5F001625195.1_202016-04-24]
28 sequences; 32,831,003 total letters
Query= NC_008586.1
Length=131204
Score E
Sequences producing significant alignments: (Bits) Value
seq3 116 3e-21
>seq3
Length=9751215
Score = 116 bits (128), Expect = 3e-21
Identities = 142/194 (73%), Gaps = 0/194 (0%)
Strand=Plus/Minus
Query 22216 AAGATGCAAATTTTTGTTAAAACTTTAACCGGTAAAACGGTCACTCTTGAAGTGGAAACC 22275
|||||||| ||||| || || || | || || || ||| |||| ||||| ||||| |
Sbjct 625701 AAGATGCAGATTTTCGTCAAGACCCTCACGGGGAAGACGATCACCCTTGAGGTGGAGTCT 625642
Query 22276 ACCGATACCGTGGACGATATCAAACAAAAAATTCAAGACAAGGAGGGTATTCCACCCGAT 22335
|||| ||| | ||| | |||| || || || ||||||||||| || || |||||
Sbjct 625641 TCCGACACCATCGACAACGTCAAGTCCAAGATCCAGGACAAGGAGGGCATCCCCCCCGAC 625582
Query 22336 CAACAACGTCTTATATTTGCCGGCAAACAGTTAGAGGATCACCGCACCGTCTCCGATTAC 22395
||||| || || || || |||||||| ||| | |||||| ||||||| | ||| |||
Sbjct 625581 CAACAGCGCCTCATCTTCGCCGGCAAGCAGCTCGAGGATGGCCGCACCCTGAGCGACTAC 625522
Query 22396 AACATTCAAAAAGA 22409
||||| || || ||
Sbjct 625521 AACATCCAGAAGGA 625508
Score = 98.7 bits (108), Expect = 8e-16
Identities = 158/227 (70%), Gaps = 0/227 (0%)
Strand=Plus/Minus
Query 22219 ATGCAAATTTTTGTTAAAACTTTAACCGGTAAAACGGTCACTCTTGAAGTGGAAACCACC 22278
||||| || || || || || || ||||| || ||| |||| | || |||||| | |
Sbjct 4593094 ATGCAGATCTTCGTCAAGACGTTGACCGGCAAGACGATCACGTTGGAGGTGGAATCGTCG 4593035
Query 22279 GATACCGTGGACGATATCAAACAAAAAATTCAAGACAAGGAGGGTATTCCACCCGATCAA 22338
|| || | ||| | | || || ||||| ||||||||||| || || ||||| ||
Sbjct 4593034 GACACAATCGACAACGTAAAGAGCAAGATTCAGGACAAGGAGGGCATCCCGCCCGACCAG 4592975
Query 22339 CAACGTCTTATATTTGCCGGCAAACAGTTAGAGGATCACCGCACCGTCTCCGATTACAAC 22398
|| || || || || |||||||| ||| | ||||| ||| ||| | ||| ||||||
Sbjct 4592974 CAGCGCCTGATTTTCGCCGGCAAGCAGCTCGAGGACGGCCGTACCTTGAGCGACTACAAC 4592915
Query 22399 ATTCAAAAAGAATCCACCATACATTTAGTTTTGCGATTGCGCGGAGG 22445
|| || || || ||| ||||| | || |||| ||||||| ||
Sbjct 4592914 ATCCAGAAGGAGAGCACTCTACATCTTGTACTGCGCCTGCGCGGCGG 4592868
Score = 91.5 bits (100), Expect = 1e-13
Identities = 124/173 (72%), Gaps = 0/173 (0%)
Strand=Plus/Minus
Query 22243 ACCGGTAAAACGGTCACTCTTGAAGTGGAAACCACCGATACCGTGGACGATATCAAACAA 22302
|| || || || |||| ||||| || || | | || || | ||| || ||||
Sbjct 4593590 ACGGGCAAGACCATCACGCTTGAGGTCGAGTCGTCGGACACGATCGACAATGTCAAGTCG 4593531
Query 22303 AAAATTCAAGACAAGGAGGGTATTCCACCCGATCAACAACGTCTTATATTTGCCGGCAAA 22362
|| || || ||||||||||| || || ||||| || || || || || || ||||||||
Sbjct 4593530 AAGATCCAGGACAAGGAGGGCATCCCTCCCGACCAGCAGCGCCTGATTTTCGCCGGCAAG 4593471
Query 22363 CAGTTAGAGGATCACCGCACCGTCTCCGATTACAACATTCAAAAAGAATCCAC 22415
||| | |||||| ||| ||| | |||||||||||||| || || || || ||
Sbjct 4593470 CAGCTCGAGGATGGCCGGACCTTGTCCGATTACAACATCCAGAAGGAGTCGAC 4593418
Score = 91.5 bits (100), Expect = 1e-13
Identities = 199/295 (67%), Gaps = 5/295 (2%)
Strand=Plus/Minus
Query 130101 CAGTTCAAGGAAATCGTAAATGTCGGCGTGCCACGGTTCAACATAAATTGCCATTGCGCC 130160
||| || || || || ||| |||||||||||||||||| | || || || | |||||
Sbjct 5389443 CAGGTCGAGAAACTCAAAAACGTCGGCGTGCCACGGTTCCAGGTAGATGGCGAAGGCGCC 5389384
Query 130161 CTTCCG---TTTGCCCCCTTGGTCAACGTGGCGCACGGCATTGTTGTAGACTCGCAACAT 130217
| ||| ||||| || ||||| |||| || | | |||||| |||| || | |||
Sbjct 5389383 CGGCCGCTTGTTGCCGCCCTGGTCGACGTACCGGGCCGTGTTGTTGAAGACGCGAAGCAT 5389324
Query 130218 TGCCTCCAATCCGTTGGCCGTGCCGTTTGTGCTCTCAATGAAACTGCCACGAGCCCGAAC 130277
| | | ||||||| || ||||| |||| ||||| | || || || |
Sbjct 5389323 GGGCGTGATGCCGTTGGAGGTACCGTTGGTGCCGGCAATGTAGGATCCGGTGGCGCGGAT 5389264
Query 130278 GTTATGAACGCTTAGACCTATGCCGCCGCCAAATTTTGATATCAACGCGCA-ATCGCGTA 130336
| || | | | || || ||||||||| | | || || |||| ||||| || | |
Sbjct 5389263 GCGGTGGATGTTGAGGCCGATGCCGCCGGCCATCTTGGAGATCATGGCGCACGTCTTG-A 5389205
Query 130337 GCGTTTCATAAATGCCAACGATACTGTCTTCTTTAATGTTTAGGAGGAAACACGA 130391
|||| || || ||||| |||| ||||| || || |||| | |||||| |||||
Sbjct 5389204 GCGTGTCGTAGATGCCCTCGATGCTGTCGTCCTTCATGTCGACGAGGAAGCACGA 5389150
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 419727856767820
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |