Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Drechmeria_20coniospora_20[genbank_20GCA_5F001625195.1_202016-04-24] 28 sequences; 32,831,003 total letters Query= NC_008603.1 Length=321240 Score E Sequences producing significant alignments: (Bits) Value seq1 100 6e-16 >seq1 Length=12542233 Score = 100 bits (110), Expect = 6e-16 Identities = 142/197 (72%), Gaps = 6/197 (3%) Strand=Plus/Minus Query 279696 GTAGGTTCTCTGTCGGGTGGTTGGAAGATGAAGCTGGCCCTCACTCGCGCCATTCTACTG 279755 || || || ||||| || ||||||||||||||||| |||||| | |||||||| || | Sbjct 7841624 GTCGGATCGCTGTCCGGCGGTTGGAAGATGAAGCTCGCCCTCGCCCGCGCCATGCTGCAA 7841565 Query 279756 CGTGCCGATGTCCTACTGCTTGATGAGCCAACCAACCACATGGACACCACCAACGTAGCC 279815 ||||| ||||| ||||| || ||||| ||||||||| | ||| |||||| | || Sbjct 7841564 AAGGCCGACGTCCTGCTGCTCGACGAGCCGACCAACCACCTCGACGTGACCAACATTGCG 7841505 Query 279816 TGGCTAGTGTCCTACCTAACCAGTCTGAAGAATG---TTTCTTCCCTCATTGTCTCTCAC 279872 ||| | | ||| || | || | | | | || | | |||||| ||||| ||| Sbjct 7841504 TGGTTGGAAAACTATCT--CAAGAC-GCACACTGACATCACGAGCCTCATCGTCTCCCAC 7841448 Query 279873 GACTCTGGCTTCCTAGA 279889 ||||| |||||||| || Sbjct 7841447 GACTCGGGCTTCCTCGA 7841431 Score = 95.1 bits (104), Expect = 2e-14 Identities = 178/258 (69%), Gaps = 8/258 (3%) Strand=Plus/Minus Query 279309 GAGGCAAAGGACGAAGCAGAGAAGGAGACTGAGCCAGGTGAGGATCTGTGTGACTGTGAT 279368 ||||| ||| ||| || || ||||| ||| || |||||||| || |||| Sbjct 11688211 GAGGCCGAGGCCGAGGCTGACGAGGAG---GAG---GGCGAGGATCTCTGCAACTGCACC 11688158 Query 279369 TTCTCGCTCGCATATGGTGGGAAGATTCTGCTAAACTCTACCCGCCTCAACATCAAGCGT 279428 ||||| ||||| || |||| ||||||||||| ||| || | ||| | |||||| Sbjct 11688157 TTCTCCCTCGCCTACGGTGCCAAGATTCTGCTCAACCAGACTCACCTGCGTCTGAAGCGT 11688098 Query 279429 GGCAACCGGTATGGTCTCATCGGTCCCAATGGAGCGGGTAAGAGCACTCTAATGCGCGCC 279488 ||| | || || |||||| ||| ||||| || | || ||| ||| || ||||| ||| Sbjct 11688097 GGCCAGCGCTACGGTCTCTGCGGCCCCAACGGTTCCGGCAAGTCCACCCTCATGCGTGCC 11688038 Query 279489 ATTGCAAACGGTCAGCTGGAAGGATTTCCTAACGCA-TCTGAGGTAAGGACAGTGTATGT 279547 || |||| ||| | | ||| ||||| | ||| ||||| | ||| || | || Sbjct 11688037 ATCAACAACGAGCAGGTCG-AGGGTTTCCCCAAGCAGAGCGAGGTCAAGACCGTCTTCGT 11687979 Query 279548 AGAGCACGACATCGACTC 279565 ||||||||| ||||||| Sbjct 11687978 CGAGCACGACCTCGACTC 11687961 Score = 89.7 bits (98), Expect = 1e-12 Identities = 134/188 (71%), Gaps = 2/188 (1%) Strand=Plus/Minus Query 280174 TCATTGGACCCAATGGTGCGGGTAAGTCTACCCTAATCAAAGTCCTGACTGGCGAGACCC 280233 |||| || ||||| || || || ||||| || || ||||| | || || ||||||||| Sbjct 7841143 TCATCGGGCCCAACGGCGCCGGCAAGTCGACGCTCATCAAGCTGCTCACGGGCGAGACCA 7841084 Query 280234 AGGCCACTGAGGGGTCCGTTTG-GAAGCATCCCAACATGCGGATGGCTTACGTCGCTCAG 280292 | || || ||| | | | |||||| || ||| |||| || | ||| || ||| Sbjct 7841083 TCCCGAC-GACGGGCAAGGTCGAGAAGCACCCGAACCTGCGCATCGGCTACATCAAGCAG 7841025 Query 280293 CACGCTTTCCACCACATCGAGAACCACCTGGACATGACTCCTAACCAATACATTCAGTGG 280352 ||||| || | ||| |||||| ||||| || | ||| || ||||| ||| | |||||| Sbjct 7841024 CACGCCCTCGAGCACGTCGAGATGCACCTCGAGAAGACGCCGAACCAGTACCTGCAGTGG 7840965 Query 280353 CGCTATGC 280360 ||||| || Sbjct 7840964 CGCTACGC 7840957 Score = 86.0 bits (94), Expect = 1e-11 Identities = 102/136 (75%), Gaps = 2/136 (1%) Strand=Plus/Minus Query 280704 CACTCTCGCATTCGCGGTCTTTCTGGAGGCCAGAAGGTCAAACTTGTCATCGGAGCA-GC 280762 ||||| ||||| || ||||| ||||| |||||| ||||| ||| ||| || || Sbjct 11686777 CACTCCCGCATGCGTGGTCTGTCTGGTGGCCAGCGTGTCAAGACCGTCCTCGCTGCCTGC 11686718 Query 280763 TCTGTGGCAACACCCTCACGTGATCGTTCTCGACGAGCCTACCAACTATCTGGACCGCGA 280822 || |||||| | ||| || | ||||| || |||||||| |||||||| ||||||||||| Sbjct 11686717 TC-GTGGCAGCGCCCGCATCTTATCGTCCTTGACGAGCCGACCAACTACCTGGACCGCGA 11686659 Query 280823 GAGCCTGGGCGCTCTG 280838 ||| || || ||| Sbjct 11686658 CTCCCTCGGTGCCCTG 11686643 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1027836431263548