Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Drechmeria_20coniospora_20[genbank_20GCA_5F001625195.1_202016-04-24] 28 sequences; 32,831,003 total letters Query= NC_008724.1 Length=288047 Score E Sequences producing significant alignments: (Bits) Value seq3 176 8e-39 seq1 93.3 8e-14 >seq3 Length=9751215 Score = 176 bits (194), Expect = 8e-39 Identities = 175/227 (77%), Gaps = 0/227 (0%) Strand=Plus/Plus Query 68235 CCTCCGCGAAGGCGCAATACCAAGTGTAGCGTGGACTCTTTTTGGATGTTATAATCGGAG 68294 || || || ||||||| || | ||| || ||| ||| || |||||||| || ||| Sbjct 625472 CCACCACGGAGGCGCAGCACGAGGTGCAGGGTGCTCTCCTTCTGGATGTTGTAGTCGCTC 625531 Query 68295 AGTGTCCTCCCATCTTCTAACTGCTTCCCGGCGAATATGAGTCTTTGTTGGTCGGGTGGA 68354 || || | ||||| || | |||||| |||||||| ||||| | ||||||||||| || Sbjct 625532 AGGGTGCGGCCATCCTCGAGCTGCTTGCCGGCGAAGATGAGGCGCTGTTGGTCGGGGGGG 625591 Query 68355 ATGCCTTCCTTGTCTTGAATCTTTGCCTTGACGGCCTCGATGGTGTCTGCTGATTCTACT 68414 ||||| |||||||| || ||||| | ||||||| ||||||||||| | || || || Sbjct 625592 ATGCCCTCCTTGTCCTGGATCTTGGACTTGACGTTGTCGATGGTGTCGGAAGACTCCACC 625651 Query 68415 TCCAAGGTGATGGTTTTTCCCGTGAGGGTCTTGACGAATATCTGCAT 68461 || | |||||| || || |||||||||||||||||||| |||||||| Sbjct 625652 TCAAGGGTGATCGTCTTCCCCGTGAGGGTCTTGACGAAAATCTGCAT 625698 Score = 149 bits (164), Expect = 1e-30 Identities = 169/227 (74%), Gaps = 0/227 (0%) Strand=Plus/Plus Query 68235 CCTCCGCGAAGGCGCAATACCAAGTGTAGCGTGGACTCTTTTTGGATGTTATAATCGGAG 68294 || ||||| ||||||| ||| | ||||| ||| ||| || |||||||| || ||| Sbjct 4592868 CCGCCGCGCAGGCGCAGTACAAGATGTAGAGTGCTCTCCTTCTGGATGTTGTAGTCGCTC 4592927 Query 68295 AGTGTCCTCCCATCTTCTAACTGCTTCCCGGCGAATATGAGTCTTTGTTGGTCGGGTGGA 68354 | || | || || || | |||||| |||||||| || || | || |||||||| || Sbjct 4592928 AAGGTACGGCCGTCCTCGAGCTGCTTGCCGGCGAAAATCAGGCGCTGCTGGTCGGGCGGG 4592987 Query 68355 ATGCCTTCCTTGTCTTGAATCTTTGCCTTGACGGCCTCGATGGTGTCTGCTGATTCTACT 68414 ||||| |||||||| |||||||| ||| ||| ||||| ||||| | ||||| || Sbjct 4592988 ATGCCCTCCTTGTCCTGAATCTTGCTCTTTACGTTGTCGATTGTGTCCGACGATTCCACC 4593047 Query 68415 TCCAAGGTGATGGTTTTTCCCGTGAGGGTCTTGACGAATATCTGCAT 68461 ||||| ||||| || || || || | ||||||||||| |||||||| Sbjct 4593048 TCCAACGTGATCGTCTTGCCGGTCAACGTCTTGACGAAGATCTGCAT 4593094 >seq1 Length=12542233 Score = 93.3 bits (102), Expect = 8e-14 Identities = 140/199 (70%), Gaps = 0/199 (0%) Strand=Plus/Plus Query 224961 GGTCCTGGCCTGAGGCATACCGCCACTGGATGTACTGGTTGGGGGTCATGTCCAGGTGGT 225020 |||| | ||| ||| || |||||||| | ||||||||| || ||| | || ||||| Sbjct 7840943 GGTCGTCGCCGTTGGCGTAGCGCCACTGCAGGTACTGGTTCGGCGTCTTCTCGAGGTGCA 7841002 Query 225021 TCTCAATATGGTGGAAAGCATGCTGGGCTACGTACGCCATGCGCATGTTGGGATGCTTCC 225080 |||| | || | || || ||||| | ||| | ||||||| ||| || |||||| Sbjct 7841003 TCTCGACGTGCTCGAGGGCGTGCTGCTTGATGTAGCCGATGCGCAGGTTCGGGTGCTTCT 7841062 Query 225081 ACACAGAGCCCCGAGTCGGTTGTGCCTCGCCGGTGAGGACCTTGATGAGCGTAGTCTTGC 225140 || |||| ||||| | |||||| ||||| | |||||||||||| | ||||| Sbjct 7841063 CGACCTTGCCCGTCGTCGGGATGGTCTCGCCCGTGAGCAGCTTGATGAGCGTCGACTTGC 7841122 Query 225141 CCGCACCATTGGGGCCAAT 225159 | || || ||||| || || Sbjct 7841123 CGGCGCCGTTGGGCCCGAT 7841141 Score = 93.3 bits (102), Expect = 8e-14 Identities = 137/194 (71%), Gaps = 0/194 (0%) Strand=Plus/Plus Query 225445 GTCAAGGAAGCCAGAGTCGTGGGACACAATGATGGACGACACGTTCGTCAGGCCCTTGAG 225504 ||| |||||||| ||||||||||| || |||| | || | || || | |||||| Sbjct 7841430 GTCGAGGAAGCCCGAGTCGTGGGAGACGATGAGGCTCGTGATGTCAGTGTGCGTCTTGAG 7841489 Query 225505 GTGCGTGATGAGCCATGCCACGTTGCTGACGTCCATGTGGTTTGTAGGTTCGTCCAGAAG 225564 | | | ||| || | |||| | ||||| | |||||| || || ||||| || || Sbjct 7841490 ATAGTTTTCCAACCACGCAATGTTGGTCACGTCGAGGTGGTTGGTCGGCTCGTCGAGCAG 7841549 Query 225565 CAGGATGTCAGCATCAATGAGGATGGCGCGCGTGAGAGACAGCTTCATTTTCCAGCCCCC 225624 ||||| ||| || | || |||||||| | ||| | |||||||| ||||| || || Sbjct 7841550 CAGGACGTCGGCCTTTTGCAGCATGGCGCGGGCGAGGGCGAGCTTCATCTTCCAACCGCC 7841609 Query 225625 GGACAGGGAGCCGA 225638 |||||| || |||| Sbjct 7841610 GGACAGCGATCCGA 7841623 Score = 93.3 bits (102), Expect = 8e-14 Identities = 440/682 (65%), Gaps = 49/682 (7%) Strand=Plus/Plus Query 224981 CGCCACTGGATGTACTGGTTGGGGGTCATGTCCAGGTGGTTCTCAATATGGTGGAAAGCA 225040 |||||||||||||||| | || ||| |||| ||||||| || || ||| ||| || Sbjct 11687172 CGCCACTGGATGTACTCGGAAGGCGTCTTGTCGAGGTGGTCATCGATGTGGGCGAAGGCG 11687231 Query 225041 TGCTGGGCTACGTACGCCATGCGCATGTTGGGATGCTTCCACA-CAGAGCCCCGAGTCGG 225099 ||||| | ||| || || || ||||| |||| | | | | || || || Sbjct 11687232 TGCTGCTTGATGTAGGCGATACGGATGTTCTCGTGCTGGTAGATCTCACCCTCGGTAGGG 11687291 Query 225100 TTGTGCCTCGCCGGTGAGGACCTTGATGAGCGTAGTCTTGCCCGCACCATTGGGGCCAAT 225159 || | ||| || || ||||| ||||| ||||| | |||||| ||||| |||||||| || Sbjct 11687292 ATGAG-CTCACCCGTCAGGACGTTGATCAGCGTCGACTTGCCGGCACCGTTGGGGCCGAT 11687350 Query 225160 CACGCCAATCCGGGA--TGACATTGCAACCTGCGAGTTCACGTTGCTGAAGATCTCAGGG 225217 ||| |||| || || || | ||| ||| || | || | | ||||| ||| Sbjct 11687351 GACGGCAATACGAGAGCCGAGAGAGCA--CTGGAAGGAGATGTCGGT---GATCT-GGGG 11687404 Query 225218 CCAGTTTGGTAAGCAAAGGC-CACGCCACGCAGCTTCATGATGGCACG------------ 225264 | || | ||| ||| || | | | | || || ||||||| Sbjct 11687405 C---TTCG--AAGTGCCGGCATACTGGAAGGA-CATCTTGGTGGCACGGAGAATGGCCTT 11687458 Query 225265 GTCCTTGGAAGTAATACCCTCCAGGAACCCGGGCTCGGGGAACTCCCACTTGGTCACCGC 225324 | |||||| | | |||||| ||||| |||||||||||||| ||| | || | | Sbjct 11687459 GGCCTTGGTCTTGACACCCTCGAGGAAACCGGGCTCGGGGAAGGAGAACTCGATCTCGGA 11687518 Query 225325 GTCCTTCAGGTCGTAGTAAGATGCAGCCTCGGG---TCGCTTTGCCACGAAAGCAGACAG 225381 | | || |||||||| || ||| ||| ||||| ||||| | | || Sbjct 11687519 GGCACCGAGCTCGTAGTACGACTTGGCCGAGGGAACCCGCTT---GACGAACTCGGCGAG 11687575 Query 225382 GTTTCCGAGGTGCTTCGTGAGCTTGAGGTTCTTCTCGTAATGAACAAT-TGCCGAGCACA 225440 ||| || ||| | ||||||||| | |||||| || || || ||| | ||| | Sbjct 11687576 GTTACCACGGTAACGCTTGAGCTTGAAG---CGCTCGTAGTGGACGATGTGCTG-GCAGA 11687631 Query 225441 CTGCGTCAAGGAAGCCAGAGTCGTGGGACACAATGATGGACGACACGTTCGTCAGGCCCT 225500 | ||| |||||||| ||||||||||| || |||||||||| | || || | Sbjct 11687632 CGTTGTCGAGGAAGCCGGAGTCGTGGGAGACGATGATGGACGTGCAGGGCG--AG----T 11687685 Query 225501 TGAGGTG--CGTGAT-GAGCCATGCCACGTTGCTGACGTCCATGTGGTTTGTAGGTTCGT 225557 ||| | | || | |||||| ||||| | ||||||| ||||| || || |||| Sbjct 11687686 TGATGAGATAGTCCTCGAGCCACTTGACGTTCTTCACGTCCAAATGGTTGGTCGGCTCGT 11687745 Query 225558 CCAGAAGCAGGATGTCAGCATCAATGAGGATGGCGCGCGTGAGAGACAGCTTCATTTTCC 225617 | || ||||| ||||| | | || || ||| || || | ||||||||| |||| Sbjct 11687746 CGAGCAGCAGAATGTCGGGGGCCTCGAAGACGGCACGGCACAGGGCCAGCTTCATCTTCC 11687805 Query 225618 AGCCCCCGGACAGGGAGCCGAT 225639 | || || || |||| || ||| Sbjct 11687806 AACCACCAGAGAGGGCGCTGAT 11687827 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 921622077432160