Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Drechmeria_20coniospora_20[genbank_20GCA_5F001625195.1_202016-04-24]
28 sequences; 32,831,003 total letters
Query= NC_008724.1
Length=288047
Score E
Sequences producing significant alignments: (Bits) Value
seq3 176 8e-39
seq1 93.3 8e-14
>seq3
Length=9751215
Score = 176 bits (194), Expect = 8e-39
Identities = 175/227 (77%), Gaps = 0/227 (0%)
Strand=Plus/Plus
Query 68235 CCTCCGCGAAGGCGCAATACCAAGTGTAGCGTGGACTCTTTTTGGATGTTATAATCGGAG 68294
|| || || ||||||| || | ||| || ||| ||| || |||||||| || |||
Sbjct 625472 CCACCACGGAGGCGCAGCACGAGGTGCAGGGTGCTCTCCTTCTGGATGTTGTAGTCGCTC 625531
Query 68295 AGTGTCCTCCCATCTTCTAACTGCTTCCCGGCGAATATGAGTCTTTGTTGGTCGGGTGGA 68354
|| || | ||||| || | |||||| |||||||| ||||| | ||||||||||| ||
Sbjct 625532 AGGGTGCGGCCATCCTCGAGCTGCTTGCCGGCGAAGATGAGGCGCTGTTGGTCGGGGGGG 625591
Query 68355 ATGCCTTCCTTGTCTTGAATCTTTGCCTTGACGGCCTCGATGGTGTCTGCTGATTCTACT 68414
||||| |||||||| || ||||| | ||||||| ||||||||||| | || || ||
Sbjct 625592 ATGCCCTCCTTGTCCTGGATCTTGGACTTGACGTTGTCGATGGTGTCGGAAGACTCCACC 625651
Query 68415 TCCAAGGTGATGGTTTTTCCCGTGAGGGTCTTGACGAATATCTGCAT 68461
|| | |||||| || || |||||||||||||||||||| ||||||||
Sbjct 625652 TCAAGGGTGATCGTCTTCCCCGTGAGGGTCTTGACGAAAATCTGCAT 625698
Score = 149 bits (164), Expect = 1e-30
Identities = 169/227 (74%), Gaps = 0/227 (0%)
Strand=Plus/Plus
Query 68235 CCTCCGCGAAGGCGCAATACCAAGTGTAGCGTGGACTCTTTTTGGATGTTATAATCGGAG 68294
|| ||||| ||||||| ||| | ||||| ||| ||| || |||||||| || |||
Sbjct 4592868 CCGCCGCGCAGGCGCAGTACAAGATGTAGAGTGCTCTCCTTCTGGATGTTGTAGTCGCTC 4592927
Query 68295 AGTGTCCTCCCATCTTCTAACTGCTTCCCGGCGAATATGAGTCTTTGTTGGTCGGGTGGA 68354
| || | || || || | |||||| |||||||| || || | || |||||||| ||
Sbjct 4592928 AAGGTACGGCCGTCCTCGAGCTGCTTGCCGGCGAAAATCAGGCGCTGCTGGTCGGGCGGG 4592987
Query 68355 ATGCCTTCCTTGTCTTGAATCTTTGCCTTGACGGCCTCGATGGTGTCTGCTGATTCTACT 68414
||||| |||||||| |||||||| ||| ||| ||||| ||||| | ||||| ||
Sbjct 4592988 ATGCCCTCCTTGTCCTGAATCTTGCTCTTTACGTTGTCGATTGTGTCCGACGATTCCACC 4593047
Query 68415 TCCAAGGTGATGGTTTTTCCCGTGAGGGTCTTGACGAATATCTGCAT 68461
||||| ||||| || || || || | ||||||||||| ||||||||
Sbjct 4593048 TCCAACGTGATCGTCTTGCCGGTCAACGTCTTGACGAAGATCTGCAT 4593094
>seq1
Length=12542233
Score = 93.3 bits (102), Expect = 8e-14
Identities = 140/199 (70%), Gaps = 0/199 (0%)
Strand=Plus/Plus
Query 224961 GGTCCTGGCCTGAGGCATACCGCCACTGGATGTACTGGTTGGGGGTCATGTCCAGGTGGT 225020
|||| | ||| ||| || |||||||| | ||||||||| || ||| | || |||||
Sbjct 7840943 GGTCGTCGCCGTTGGCGTAGCGCCACTGCAGGTACTGGTTCGGCGTCTTCTCGAGGTGCA 7841002
Query 225021 TCTCAATATGGTGGAAAGCATGCTGGGCTACGTACGCCATGCGCATGTTGGGATGCTTCC 225080
|||| | || | || || ||||| | ||| | ||||||| ||| || ||||||
Sbjct 7841003 TCTCGACGTGCTCGAGGGCGTGCTGCTTGATGTAGCCGATGCGCAGGTTCGGGTGCTTCT 7841062
Query 225081 ACACAGAGCCCCGAGTCGGTTGTGCCTCGCCGGTGAGGACCTTGATGAGCGTAGTCTTGC 225140
|| |||| ||||| | |||||| ||||| | |||||||||||| | |||||
Sbjct 7841063 CGACCTTGCCCGTCGTCGGGATGGTCTCGCCCGTGAGCAGCTTGATGAGCGTCGACTTGC 7841122
Query 225141 CCGCACCATTGGGGCCAAT 225159
| || || ||||| || ||
Sbjct 7841123 CGGCGCCGTTGGGCCCGAT 7841141
Score = 93.3 bits (102), Expect = 8e-14
Identities = 137/194 (71%), Gaps = 0/194 (0%)
Strand=Plus/Plus
Query 225445 GTCAAGGAAGCCAGAGTCGTGGGACACAATGATGGACGACACGTTCGTCAGGCCCTTGAG 225504
||| |||||||| ||||||||||| || |||| | || | || || | ||||||
Sbjct 7841430 GTCGAGGAAGCCCGAGTCGTGGGAGACGATGAGGCTCGTGATGTCAGTGTGCGTCTTGAG 7841489
Query 225505 GTGCGTGATGAGCCATGCCACGTTGCTGACGTCCATGTGGTTTGTAGGTTCGTCCAGAAG 225564
| | | ||| || | |||| | ||||| | |||||| || || ||||| || ||
Sbjct 7841490 ATAGTTTTCCAACCACGCAATGTTGGTCACGTCGAGGTGGTTGGTCGGCTCGTCGAGCAG 7841549
Query 225565 CAGGATGTCAGCATCAATGAGGATGGCGCGCGTGAGAGACAGCTTCATTTTCCAGCCCCC 225624
||||| ||| || | || |||||||| | ||| | |||||||| ||||| || ||
Sbjct 7841550 CAGGACGTCGGCCTTTTGCAGCATGGCGCGGGCGAGGGCGAGCTTCATCTTCCAACCGCC 7841609
Query 225625 GGACAGGGAGCCGA 225638
|||||| || ||||
Sbjct 7841610 GGACAGCGATCCGA 7841623
Score = 93.3 bits (102), Expect = 8e-14
Identities = 440/682 (65%), Gaps = 49/682 (7%)
Strand=Plus/Plus
Query 224981 CGCCACTGGATGTACTGGTTGGGGGTCATGTCCAGGTGGTTCTCAATATGGTGGAAAGCA 225040
|||||||||||||||| | || ||| |||| ||||||| || || ||| ||| ||
Sbjct 11687172 CGCCACTGGATGTACTCGGAAGGCGTCTTGTCGAGGTGGTCATCGATGTGGGCGAAGGCG 11687231
Query 225041 TGCTGGGCTACGTACGCCATGCGCATGTTGGGATGCTTCCACA-CAGAGCCCCGAGTCGG 225099
||||| | ||| || || || ||||| |||| | | | | || || ||
Sbjct 11687232 TGCTGCTTGATGTAGGCGATACGGATGTTCTCGTGCTGGTAGATCTCACCCTCGGTAGGG 11687291
Query 225100 TTGTGCCTCGCCGGTGAGGACCTTGATGAGCGTAGTCTTGCCCGCACCATTGGGGCCAAT 225159
|| | ||| || || ||||| ||||| ||||| | |||||| ||||| |||||||| ||
Sbjct 11687292 ATGAG-CTCACCCGTCAGGACGTTGATCAGCGTCGACTTGCCGGCACCGTTGGGGCCGAT 11687350
Query 225160 CACGCCAATCCGGGA--TGACATTGCAACCTGCGAGTTCACGTTGCTGAAGATCTCAGGG 225217
||| |||| || || || | ||| ||| || | || | | ||||| |||
Sbjct 11687351 GACGGCAATACGAGAGCCGAGAGAGCA--CTGGAAGGAGATGTCGGT---GATCT-GGGG 11687404
Query 225218 CCAGTTTGGTAAGCAAAGGC-CACGCCACGCAGCTTCATGATGGCACG------------ 225264
| || | ||| ||| || | | | | || || |||||||
Sbjct 11687405 C---TTCG--AAGTGCCGGCATACTGGAAGGA-CATCTTGGTGGCACGGAGAATGGCCTT 11687458
Query 225265 GTCCTTGGAAGTAATACCCTCCAGGAACCCGGGCTCGGGGAACTCCCACTTGGTCACCGC 225324
| |||||| | | |||||| ||||| |||||||||||||| ||| | || | |
Sbjct 11687459 GGCCTTGGTCTTGACACCCTCGAGGAAACCGGGCTCGGGGAAGGAGAACTCGATCTCGGA 11687518
Query 225325 GTCCTTCAGGTCGTAGTAAGATGCAGCCTCGGG---TCGCTTTGCCACGAAAGCAGACAG 225381
| | || |||||||| || ||| ||| ||||| ||||| | | ||
Sbjct 11687519 GGCACCGAGCTCGTAGTACGACTTGGCCGAGGGAACCCGCTT---GACGAACTCGGCGAG 11687575
Query 225382 GTTTCCGAGGTGCTTCGTGAGCTTGAGGTTCTTCTCGTAATGAACAAT-TGCCGAGCACA 225440
||| || ||| | ||||||||| | |||||| || || || ||| | ||| |
Sbjct 11687576 GTTACCACGGTAACGCTTGAGCTTGAAG---CGCTCGTAGTGGACGATGTGCTG-GCAGA 11687631
Query 225441 CTGCGTCAAGGAAGCCAGAGTCGTGGGACACAATGATGGACGACACGTTCGTCAGGCCCT 225500
| ||| |||||||| ||||||||||| || |||||||||| | || || |
Sbjct 11687632 CGTTGTCGAGGAAGCCGGAGTCGTGGGAGACGATGATGGACGTGCAGGGCG--AG----T 11687685
Query 225501 TGAGGTG--CGTGAT-GAGCCATGCCACGTTGCTGACGTCCATGTGGTTTGTAGGTTCGT 225557
||| | | || | |||||| ||||| | ||||||| ||||| || || ||||
Sbjct 11687686 TGATGAGATAGTCCTCGAGCCACTTGACGTTCTTCACGTCCAAATGGTTGGTCGGCTCGT 11687745
Query 225558 CCAGAAGCAGGATGTCAGCATCAATGAGGATGGCGCGCGTGAGAGACAGCTTCATTTTCC 225617
| || ||||| ||||| | | || || ||| || || | ||||||||| ||||
Sbjct 11687746 CGAGCAGCAGAATGTCGGGGGCCTCGAAGACGGCACGGCACAGGGCCAGCTTCATCTTCC 11687805
Query 225618 AGCCCCCGGACAGGGAGCCGAT 225639
| || || || |||| || |||
Sbjct 11687806 AACCACCAGAGAGGGCGCTGAT 11687827
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 921622077432160
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |