Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Drechmeria_20coniospora_20[genbank_20GCA_5F001625195.1_202016-04-24] 28 sequences; 32,831,003 total letters Query= NC_009127.1 Length=295146 Score E Sequences producing significant alignments: (Bits) Value seq3 657 0.0 >seq3 Length=9751215 Score = 657 bits (728), Expect = 0.0 Identities = 1310/1913 (68%), Gaps = 57/1913 (3%) Strand=Plus/Minus Query 243737 ACGCTGAACTGGACGGGTGCGACGGCGGCCTTGGTCCTCAGGTAGTACATGCCGGTCTTG 243796 ||| ||||||||| ||| ||| ||||||| | |||| ||||||||||||||| |||||| Sbjct 5390759 ACGGTGAACTGGATGGGCGCGGCGGCGGCTTGCGTCCGCAGGTAGTACATGCCCGTCTTG 5390700 Query 243797 AGTCCACTGGACCAGGCGTGGAGGTGCATGGCCGTCAGCTTCTTCATCTTGAGCTTTGGG 243856 || || |||| || | ||||||| ||| | ||| ||| | ||| Sbjct 5390699 AGGCCGAGCTTCCAGCCGGCAAAGTGCATGCTCGTGATCTTGCCCATGGTC------GGG 5390646 Query 243857 TCGTCCTCGCACAGAAAGAGGTTGAGGGACTGGCTCTGGTCGACGAAGGGCGCC-CGCTC 243915 || | | | ||| | ||||| |||||| |||||||| ||||| |||| || || Sbjct 5390645 TCCTTCATGT---GAATG---TTGAGCGACTGGGACTGGTCGATGAAGG-CGCCGCGGTC 5390593 Query 243916 TGCGGCCATGGTGATGAGGTCCTTCTGAGATATCTCATACGCCGTCTTGTAGATGGGCTT 243975 || ||||| | | | | ||| || ||||| | |||||||||||| || ||| Sbjct 5390592 GGCCGCCATCTGCACCACCTGCCGCTGCGAAATCTCCCAGACCGTCTTGTAGAGGGCCTT 5390533 Query 243976 GAGGTGCTCGGGGAACCCTTCGATGTTCTGCACCGAGCCCTTGTGGACGATGAGCTGGGT 244035 || || | |||| | |||||||| | ||| || || | |||||| || | Sbjct 5390532 GATGTCGGCCGGGATGTTGGCAATGTTCTGGATCGACCCGTTCTCCGCGATGATGCGGTT 5390473 Query 244036 GCGCATGTTATCGTTCCACAGGCCCAAGCGCTCCAGCGCCTCGACCAGGTGCCTGTTCAC 244095 ||| ||| ||| || |||| | | || ||| || ||| ||| || Sbjct 5390472 CTTCATCGCGTCGGACCAGAGTCCCATGTCGACGAGGTCCTTGAGCAGCCAGGGGTTGAC 5390413 Query 244096 CACCTGAAACTCTCCCGACAGCACGCGGCGCTGGTAGAGGTTGCTGCTGAGCGGCTCGAT 244155 |||||||||||| || | || |||||||||||||||| |||| || |||||||| Sbjct 5390412 CACCTGAAACTCGCCGGCGAGGACGCGGCGCTGGTAGATGTTGGACGTGTACGGCTCGAA 5390353 Query 244156 GCTCTCCGTGTTGCCCAGTATCTGCGCCGTGCTCGCAGTCGGCATGGGCGACACCAGCAG 244215 || ||| |||||||||| ||||||| |||||| || |||||||| |||| | |||||| Sbjct 5390352 GCACTCGTTGTTGCCCAGGATCTGCGACGTGCTGGCCGTCGGCATCGGCGCGAGCAGCAG 5390293 Query 244216 ACTGTTCCTCACGCCGTGCCTCTGGATG-CGGAGTCTGAGCTCGTTCCAGTCCCACATGC 244274 ||||| | | ||||||| || ||| ||| | | ||| | ||| ||||| | Sbjct 5390292 GCTGTTGCGGATGCCGTGCTCCTTGATCTCGGCG-CGCAGCGTCTCCCACTCCCAATGGT 5390234 Query 244275 CCGAGAGGTCCTCGCGTTTGAGGCCCCACATGTCAAACTGCAGCAGCCCCTT-GCTGACG 244333 |||| || | |||| | ||||||||| ||||| || | |||| | | || Sbjct 5390233 CCGA--------CG-GCTTGACGTTCCACATGTCGAACTGGAGGATGCCCTCCGAGGCCG 5390183 Query 244334 GGGCTGCCCTCGTAGGTCGGGTAGGGACCGTCGCGCTGGGCCAGCTT-ACAG-CTCTCGT 244391 | | | ||||| |||||| ||| || || | || || ||||| || | ||| ||| Sbjct 5390182 GCGAT-CCCTCAAAGGTCGAGTACGGGCCCTGCTCCTTGGACAGCTCGACCGACTC-CGT 5390125 Query 244392 CGAGGGCGGCGTAGTAGATGGTCTCGAAGATCATCTTGTTCATGTCGCGGGCCTTGCCGC 244451 | ||||| |||| ||||||||||||||||||| |||||||| ||||| |||| | | Sbjct 5390124 C-AGGGCCGCGTGGTAGATGGTCTCGAAGATCTGCTTGTTCAGCTCGCGCGCCTCGGGGG 5390066 Query 244452 AGGTGAAGGGGATGCCCATCATCATGAAGACGTCGGCCAGTCCCTGCACGCCGATGCCGA 244511 | |||||| |||| || | | |||| ||||||| || ||||| ||||||| ||||| Sbjct 5390065 ACTCGAAGGGCATGCGCAGCGCGAGGAAGGCGTCGGCGAGGCCCTGGACGCCGACGCCGA 5390006 Query 244512 TGGGTCTGTGTCGC---TTGTTGGAGCGCATGGCTTCGGGCACGGGGTAAAAGTTGCCGT 244568 |||||| ||| || ||| || |||| || || | |||||||| |||| ||| Sbjct 5390005 TGGGTCGGTGGCGGAAGTTGCTGTTGCGC---GCCTCCTGGACGGGGTAGTGGTTGACGT 5389949 Query 244569 CGATCACCTTGTTGAGGTTGCGGGTGATCATGCGGACGACGTCGGCCAGCAGCTGAAAGT 244628 |||| | ||||||||||||| || | ||| || ||| |||| || |||| Sbjct 5389948 CGATGATGCGGTTGAGGTTGCGGACGACGACGCGCGTCACCTCGTGCAGCTTCTTGAAGT 5389889 Query 244629 CGTACTCGTAGGGATCCTCGGCGATGGTGATCCTCACAAACTCGTTGAGGGCGACGCTGG 244688 |||| | || ||||| | || || ||||| | ||||||| | Sbjct 5389888 CGTA---GCAGC---CCTCG----TTGTAGTCG--ACAAAGGCCGGCAGGGCGAGCGACG 5389841 Query 244689 CCAGGTTGCAGACGGCCACCTCCTCCGAGTTGGTGTACTGGACAATCTCGGTGCAGAGGT 244748 | |||||||||||||||||||| || | | ||||| || ||||||||||| |||| Sbjct 5389840 CGAGGTTGCAGACGGCCACCTCGTCGGGCGCCGAGTACTCGATGATCTCGGTGCACAGGT 5389781 Query 244749 TACTGCACTTGATGGTGCCCAGGTGCTGGTGATTGGACTTGGCGTTGCAGGCGTCCTTGT 244808 | || ||| || || |||| || || ||| |||| |||||| |||||||||| Sbjct 5389780 TGGAGCTGCGGATCGTCCCGAGGTTCTTCTGGTTGCTCTTGCGGTTGCACGCGTCCTTGT 5389721 Query 244809 AGAGCATGAAGGGCCCCCCGGTCTCGAGCTGGGCGACGAGGACGCTGTTCCAGAGGTCCC 244868 | ||||||||||| || ||||| |||||| |||||| || |||||| | | Sbjct 5389720 ACAGCATGAAGGGGTTGCCCGTCTCCGTCTGGGCCTCGAGGATCGAGTACCAGAGCTTCT 5389661 Query 244869 TAGCCTTGACCGTCCTGCGAGCCTTGCCCTCTGCCTCGTAGCGGGTGTACAGGGCCTCGA 244928 || ||||||| |||| | |||||| |||||| |||||| ||||||| Sbjct 5389660 GGGCGCGGACCGTCTTGCGGCCGCGGCCCTCGCGCTCGTACTTTTCGTACAGCGCCTCGA 5389601 Query 244929 ACTCGGGGCCCCAGACCTCGTCTAGGCCGGGGCACGACGCCGGGCACATGAGACTCCACT 244988 ||||| ||| || ||| | |||||||||||| ||||||||||| |||| | Sbjct 5389600 ACTCGTCGCCGTAGCAGTCGGCGAGGCCGGGGCACTCGTTGGGGCACATGAGCGTCCAGT 5389541 Query 244989 CGCCGCCGTCCTTGACCCTCTGCATGAAGAGGTCGGGGATCCAGAGGGCCTGGAAGAGGT 245048 ||||| | || ||| | || |||||||||||||||||||||||| || |||| |||| Sbjct 5389540 CGCCGTTCTTCTCGACGCGCTTCATGAAGAGGTCGGGGATCCAGAGCGCGAGGAACAGGT 5389481 Query 245049 CCCTGGTCCTCTGCTCGTCCGAGCCAGTGTTCTTCCTCAGCTCCAAAAAGTCAAAGACGT 245108 | | | | | ||| ||| ||| |||||| | ||| || | ||| ||||| |||| Sbjct 5389480 CGCGCGCGCGCACCTCCTCCTTGCCGTGGTTCTTGCGCAGGTCGAGAAACTCAAAAACGT 5389421 Query 245109 CGACGTGCCAGGGCTCCATGTAGACAGCGAGGGCGCCGGGCCGCTTGTTGCCTCCCTGGT 245168 || ||||||| || |||| ||||| |||| |||||| |||||||||||||| ||||||| Sbjct 5389420 CGGCGTGCCACGGTTCCAGGTAGATGGCGAAGGCGCCCGGCCGCTTGTTGCCGCCCTGGT 5389361 Query 245169 CCACCATCCTCTCGAGCGCGTTGAAGATGCGCAGGGTAGGCACTATGCCGTTAGAGTGGC 245228 | || || | |||||||| ||| || | ||| |||||||| ||| | Sbjct 5389360 CGACGTACCGGGCCGTGTTGTTGAAGACGCGAAGCATGGGCGTGATGCCGTTGGAGGTAC 5389301 Query 245229 CGTTGGTGCCCTTGATGTAGGCGCCCTTGCCCCTGAGGTTGCTGATGGACATGCCTAGTC 245288 |||||||||| ||||||| || || | | || | | |||| | ||| | | Sbjct 5389300 CGTTGGTGCCGGCAATGTAGGATCCGGTGGCGCGGATGCGGTGGATGTTGAGGCCGATGC 5389241 Query 245289 CGCCGGCGTGCTTGGAGATGAGGGCGCAGCTCTTGATGGTGTCTGCTATGCCCTCCATGC 245348 ||||||| ||||||||| | |||||| |||||| ||||| |||||||| |||| Sbjct 5389240 CGCCGGCCATCTTGGAGATCATGGCGCACGTCTTGAGCGTGTCGTAGATGCCCTCGATGC 5389181 Query 245349 TGTCCGACTTCATGTTGAGCAGAAAGCAGGAGGACAGCTGGGGCTTGGGGCTGCACGAGT 245408 |||| |||||||| || || ||||| || |||||||| | || || ||| | || Sbjct 5389180 TGTCGTCCTTCATGTCGACGAGGAAGCACGACGACAGCTGCGCCTGCGGCGTGCCGGCGT 5389121 Query 245409 TGAACAGAGTGGGGCTGGCGTGGGTAAAGTAGCGGCTCGAGAGGAACCCGTACGTCTGGA 245468 |||| || || || |||||| || || |||||| | || |||||||| || Sbjct 5389120 TGAAGAGCGTCGGCGAGGCGTGCGTGAACATCTTGCTCGACATGAGATTGTACGTCTCGA 5389061 Query 245469 -GCAGAGCGTCGATGTTGTCGCCGTGGATCTGCAGGGCG-CAC-CTCATGAGGGTGTGCT 245525 | | || |||||||||||||| || ||| | || ||| | ||||| |||||| Sbjct 5389060 TGACGCGC-TCGATGTTGTCGCCCCAGA--TGCCGACCGACACGCGCATGATCATGTGCT 5389004 Query 245526 GGGGCGTCTCGATGGGTCCCTCGGGT-CCCTTGAGCATGTAGGAGCGCTCGAGCGTCTTG 245584 | || ||||| | || | | | |||||| | |||||| |||||||| |||||| Sbjct 5389003 GCGGTCGCTCGA-CGATCTTGCCGTTGAGCTTGAGGAGGTAGGATCGCTCGAGAGTCTTG 5388945 Query 245585 AACCCAAAGTACGAGTAGCCAAAGTCGGCGTGGTGCCTGACGGCTGCGTCGAG 245637 || ||||||||| |||| |||||| || || || ||| | |||||| Sbjct 5388944 AAGCCAAAGTACTGGTAGTTGAAGTCGCGGTCGTAGACGATGGCCGAGTCGAG 5388892 Score = 217 bits (240), Expect = 3e-51 Identities = 370/523 (71%), Gaps = 25/523 (5%) Strand=Plus/Minus Query 42633 CCCTGCATCAAGAAGAAGGCGGACTGGGCGCTCAACTGGATCGAGAGTCCCGACG-CAAC 42691 || |||||| |||||||| || ||||| || |||||| | || | | | | || Sbjct 2599107 CCTTGCATCCGCAAGAAGGCTGATTGGGCCCTGCGTTGGATCCA-AGACAAGGAGTCCAC 2599049 Query 42692 GTTCGGCGAGAGGCTGGTAGCCTTTACCGCCGTCGAGGGCATCTTCTTCTCGGGCGCCTT 42751 ||||| | | || || || |||||| |||||||||| |||||||||||| || || || Sbjct 2599048 GTTCGCCCAAAGACTTGTTGCCTTTGCCGCCGTCGAAGGCATCTTCTTCAGCGGTGCTTT 2598989 Query 42752 CGCCTCCATCTTCTGGCTCAAGCAG-AAGGTGTCGATGCCCGGACTCACCTTCTCGAACG 42810 |||||| ||||||||||| ||| || ||| || ||||| || || || ||||| |||| Sbjct 2598988 CGCCTCAATCTTCTGGCTGAAGAAGCGCGGTCTC-ATGCCTGGTCTGACATTCTCCAACG 2598930 Query 42811 AACTCATCAGCAGGGACGAGGGGCTGCATAGGGACTTTGCCTGCCTCCTGTTCTCGAGCC 42870 | |||||| | || ||||| || || | || ||||| ||||| || ||| | Sbjct 2598929 AGCTCATCTCGCGTGATGAGGGTCTTCACACCGATTTTGCGTGCCTGTTGCATTCG---C 2598873 Query 42871 ACCTCAGGCACAAGCCCTCGAAGGAGCGGGTCCGGGCCATCATCACGGAGGCCGTGGAGA 42930 |||||| || | || ||| || || | ||||||||| || ||||| | Sbjct 2598872 ACCTCAACAACCGGGCCAGCAAGAAGGTCATCAACGACATCATCACCGACGCCGTCACCA 2598813 Query 42931 TCGAGAAGGAGTTCCTCACGCAGTCGCTGCCCGTGT-CCCTGGTCGGCATGAA--CCACG 42987 | ||| ||||||||||||| || | || ||| ||| | ||| |||||||||| |||| Sbjct 2598812 TTGAGCAGGAGTTCCTCACCGAGGCCCT-CCCATGTGCTCTGCTCGGCATGAATGCCAC- 2598755 Query 42988 ACCTCATGTGCAAGTACATCCAGTACGTCGCCGACCATCTCCTGTGCCAGATGGGTCTCA 43047 | | ||| |||||||| ||| ||| ||||| | |||||| || | | |||| Sbjct 2598754 -CTTGATGAAGCAGTACATCGAGTTCGTTGCCGATCGTCTCCT-TG-----TTGCTCTCG 2598702 Query 43048 GC--CG----CCTCTACAACACGCCGTGCCCCTTCGACTTTATGGAGAACATCTCGTTGG 43101 || || | ||||| || || |||||||||||| |||||||||||||| | | Sbjct 2598701 GCAACGAGAAGGTGTACAAATCGTCGAACCCCTTCGACTTCATGGAGAACATCTCCCTCG 2598642 Query 43102 AGGGCAAGACCAACTTTTTCGAGAAGCGCGTCGCCGACTACCA 43144 ||||||||||| || |||||||| || || |||||||| || Sbjct 2598641 GTGGCAAGACCAATTTCTTCGAGAAACGTGTTGCCGACTATCA 2598599 Score = 100 bits (110), Expect = 5e-16 Identities = 224/333 (67%), Gaps = 5/333 (2%) Strand=Plus/Minus Query 42300 ATCTGGTCCATGTACAAGAAGGCGCAGTTCTCCAACTGGACCGCCGAGGAGATTGACCTG 42359 |||||| |||||||||||||| || ||| |||||| ||||| ||||| || || Sbjct 2599514 ATCTGGCAAATGTACAAGAAGGCCGAGGCGTCCTTCTGGACGGCCGAAGAGATCGATCTT 2599455 Query 42360 GCCAAGGACACGGCCGGCTGGGAGTCACTGTCTGAGA-ACGAAAAG---TTTTTCCTCAA 42415 ||||||| | || |||| | || || ||| |||| || | |||| || Sbjct 2599454 TCCAAGGATTTGCACGACTGGAACA-ACCGTTTGAATGACGATGAGCGGTATTTCGTCTC 2599396 Query 42416 AAACATACTGGCCTTCTTCGCCGCCTCTGACGGCATAGTCAATGAGAACCTGGCCACCAG 42475 |||| || || ||||||||||| || ||||| || ||||| |||||||| | | | Sbjct 2599395 GCACATTCTCGCTTTCTTCGCCGCTTCGGACGGAATCGTCAACGAGAACCTTGTCGAACG 2599336 Query 42476 GTTCATGAAAGAGGTGCAGTACTTTGAGGCGCGCTGCTTCTACGGCTTCCAGATAGCCAT 42535 |||| |||||||| | ||||| |||||||||||||| ||||| || || Sbjct 2599335 TTTCAGCGGCGAGGTGCAAATCCCCGAGGCTCGCTGCTTCTACGGTTTCCAAATCATGAT 2599276 Query 42536 AGAGAACGTGCACTCTGAGGTGTACGCCAAACTGCTCAACACGTACATCCTGGATCCCGT 42595 || || | ||||| ||| ||| | || || || |||||||| ||| | || Sbjct 2599275 GGAAAATATCCACTCCGAGACCTACTCGCTCTTGATCGACTCGTACATCAAGGAGCACGC 2599216 Query 42596 CGAGCGTAACGGGCTGTTCAAGGCCATGGAGAC 42628 |||| | |||||||| ||||| || || Sbjct 2599215 TCAGCGAGAGTATCTGTTCAACGCCATTGACAC 2599183 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 944338869481280