Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Drechmeria_20coniospora_20[genbank_20GCA_5F001625195.1_202016-04-24]
28 sequences; 32,831,003 total letters
Query= NC_010240.1
Length=169794
Score E
Sequences producing significant alignments: (Bits) Value
seq3 116 4e-21
>seq3
Length=9751215
Score = 116 bits (128), Expect = 4e-21
Identities = 157/216 (73%), Gaps = 2/216 (1%)
Strand=Plus/Plus
Query 41994 CGCAACACCAAATGCAATGTGCTCTCCTTTTGAATATTGTAATCAGCCAGAGTCCGCTCG 42053
|||| || | ||| | ||||||||||| || || ||||| || || || || ||
Sbjct 4592880 CGCAGTACAAGATGTAGAGTGCTCTCCTTCTGGATGTTGTAGTCGCTCAAGGTACGGCCG 4592939
Query 42054 TCATCTAGCTGCTTACCAGCGAATATGAGTCGCTGCTGGTCGGCTGGCACGCTCTCCTTG 42113
|| || |||||||| || ||||| || || ||||||||||||| || | || |||||||
Sbjct 4592940 TCCTCGAGCTGCTTGCCGGCGAAAATCAGGCGCTGCTGGTCGGGCGGGATGCCCTCCTTG 4592999
Query 42114 TCCATGATTTTTTGTTTGAGCGTCG-CCACCGTGTCGCTCGATTCCACATCGACCGTGAT 42172
||| ||| | || | | ||| | | | ||||| ||||||||| || | ||||||
Sbjct 4593000 TCC-TGAATCTTGCTCTTTACGTTGTCGATTGTGTCCGACGATTCCACCTCCAACGTGAT 4593058
Query 42173 GGTTTTGCCCGTTAGCGTCTTTACAAAGATTTGCAT 42208
|| ||||| || | |||||| || ||||| |||||
Sbjct 4593059 CGTCTTGCCGGTCAACGTCTTGACGAAGATCTGCAT 4593094
Score = 113 bits (124), Expect = 5e-20
Identities = 158/219 (72%), Gaps = 2/219 (1%)
Strand=Plus/Plus
Query 41994 CGCAACACCAAATGCAATGTGCTCTCCTTTTGAATATTGTAATCAGCCAGAGTCCGCTCG 42053
|||| ||| | |||| ||||||||||| || || ||||| || ||| || || |
Sbjct 625484 CGCAGCACGAGGTGCAGGGTGCTCTCCTTCTGGATGTTGTAGTCGCTCAGGGTGCGGCCA 625543
Query 42054 TCATCTAGCTGCTTACCAGCGAATATGAGTCGCTGCTGGTCGGCTGGCACGCTCTCCTTG 42113
|| || |||||||| || ||||| ||||| ||||| ||||||| || | || |||||||
Sbjct 625544 TCCTCGAGCTGCTTGCCGGCGAAGATGAGGCGCTGTTGGTCGGGGGGGATGCCCTCCTTG 625603
Query 42114 TCCATGATTTTTTGTTTGAGCGTCG-CCACCGTGTCGCTCGATTCCACATCGACCGTGAT 42172
||| ||| || |||| ||| | | | |||||| || ||||| || | |||||
Sbjct 625604 TCCTGGATCTTGGACTTGA-CGTTGTCGATGGTGTCGGAAGACTCCACCTCAAGGGTGAT 625662
Query 42173 GGTTTTGCCCGTTAGCGTCTTTACAAAGATTTGCATTTT 42211
|| || ||||| || ||||| || || || ||||| ||
Sbjct 625663 CGTCTTCCCCGTGAGGGTCTTGACGAAAATCTGCATCTT 625701
Score = 100 bits (110), Expect = 3e-16
Identities = 123/168 (73%), Gaps = 0/168 (0%)
Strand=Plus/Plus
Query 42017 CTCCTTTTGAATATTGTAATCAGCCAGAGTCCGCTCGTCATCTAGCTGCTTACCAGCGAA 42076
|||||| || || |||||||| | || ||||| | || || |||||||| || |||||
Sbjct 4593423 CTCCTTCTGGATGTTGTAATCGGACAAGGTCCGGCCATCCTCGAGCTGCTTGCCGGCGAA 4593482
Query 42077 TATGAGTCGCTGCTGGTCGGCTGGCACGCTCTCCTTGTCCATGATTTTTTGTTTGAGCGT 42136
|| || ||||||||||||| || | || |||||||||| ||| || |||| |
Sbjct 4593483 AATCAGGCGCTGCTGGTCGGGAGGGATGCCCTCCTTGTCCTGGATCTTCGACTTGACATT 4593542
Query 42137 CGCCACCGTGTCGCTCGATTCCACATCGACCGTGATGGTTTTGCCCGT 42184
| | |||||| ||| || || || | ||||||||| ||||||||
Sbjct 4593543 GTCGATCGTGTCCGACGACTCGACCTCAAGCGTGATGGTCTTGCCCGT 4593590
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 543212609875520
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |