Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Drechmeria_20coniospora_20[genbank_20GCA_5F001625195.1_202016-04-24] 28 sequences; 32,831,003 total letters Query= NC_011616.1 Length=148634 Score E Sequences producing significant alignments: (Bits) Value seq3 174 1e-38 seq1 91.5 1e-13 >seq3 Length=9751215 Score = 174 bits (192), Expect = 1e-38 Identities = 1218/1904 (64%), Gaps = 114/1904 (6%) Strand=Plus/Minus Query 145719 GTCGACGGTGAACTGCGTCGCTTGAGCGGCCGGTTTTGTGCGCAGATAGTACATGCCGGT 145778 ||||||||||||||| | | ||||| | || || ||||| ||||||||||| || Sbjct 5390763 GTCGACGGTGAACTGGATGGGCGCGGCGGCGGCTTGCGTCCGCAGGTAGTACATGCCCGT 5390704 Query 145779 CTTGAGCTGTTTCTGCCACGTGTAAAAGTGTATGCTCGACATGACCGAGTACGTGGGTTC 145838 |||||| || ||| | |||||| ||||||| ||| | | | ||| || Sbjct 5390703 CTTGAGGCCGAGCTTCCAGCCGGCAAAGTGCATGCTCG---TGATCTTGCCCATGG--TC 5390649 Query 145839 GG---CGACAAACAAATTTAGAG--ATTGGCTCTGATCAATGAAAGGAGCC-CGGTCGGC 145892 || | || ||| | ||| | ||| ||| || ||||| || ||| |||||||| Sbjct 5390648 GGGTCCTTCATGTGAATGTTGAGCGACTGGGACTGGTCGATGAA-GGCGCCGCGGTCGGC 5390590 Query 145893 GGCCATGTCTATCA--TGCA-CTTTGATTTAATTTCCCATGCGGTTTTAAAGAGATCCTT 145949 ||||| | | || ||| || || ||| ||||| | || || |||| |||| Sbjct 5390589 CGCCATCTGCACCACCTGCCGCTGCGA---AATCTCCCAGACCGTCTTGTAGAGGGCCTT 5390533 Query 145950 GACGT--GCTGGGGTATTTCGTCAATGTTCTGCACAGACCCATTTTCGGCCAATATTTTG 146007 || || || ||| | || | |||||||||| | ||||| || || || | || | Sbjct 5390532 GATGTCGGCCGGGATGTT--GGCAATGTTCTGGATCGACCCGTTCTCCGCGATGATGCGG 5390475 Query 146008 TTGCGCAATTCTGGAGT-GTA--AATGTTCAA-GTCTACGAGGGCCTTGATGAGATACTG 146063 || || | | || | | | || | | ||| |||||| |||||| || | | Sbjct 5390474 TTCTTCA----TCGCGTCGGACCAGAGTCCCATGTCGACGAGGTCCTTGAGCAGCCAGGG 5390419 Query 146064 GTTGACCACCTGAAACTCGCCGGCGAGAACGCGCCTCAGATACACGTTGCTGGTGAACGG 146123 ||||||||||||||||||||||||||| ||||| | | | || | |||| ||| |||| Sbjct 5390418 GTTGACCACCTGAAACTCGCCGGCGAGGACGCGGCGCTGGTAGATGTTGGACGTGTACGG 5390359 Query 146124 CTCGAACGACTCGTTGTTACCGAGTATCTGCGCCGTCGTAGCGGTAGGCATGTACGCCAC 146183 |||||| |||||||||| || || ||||||| ||| | || || ||||| ||| | Sbjct 5390358 CTCGAAGCACTCGTTGTTGCCCAGGATCTGCGACGTGCTGGCCGTCGGCATCGGCGCGAG 5390299 Query 146184 CAGCAAAGAGTTTCTCACGCCGTG-TCTTTGAATCTTTTCCCGTAGTTTGGACCAATTCC 146242 ||||| ||| | | |||||| || ||| |||| | || || | ||| | || Sbjct 5390298 CAGCAGGCTGTTGCGGATGCCGTGCTCCTTG-ATCTCGGCGCGCAGCGTCTCCCACTCCC 5390240 Query 146243 ACAAATGATCCGTGGGATAGATATTGTAGTTGTCGTAATGCATAGTG-CCGCGGAACAGG 146301 |||| |||| || | || || | ||||| | || | || || | || | Sbjct 5390239 ---AATGGTCCGACGGCTTGACGTTCCACATGTCGAACTGGAGGATGCCCTCCGA--GGC 5390185 Query 146302 GGGCTAT-TCTCGTACGATTCATAAGGACCGTCGATCTTGGCCAGTTCGCAGCTAGCTTC 146360 ||| || ||| | | || || || | ||||| ||| ||| | | | || | Sbjct 5390184 CGGCGATCCCTCAAAGGTCGAGTACGGGCCCTGCTCCTTGGACAGCTCG-ACCGA-CTCC 5390127 Query 146361 --CAGAGCCGAAAAGTATATGGTCTCCGCGATCATGTAGTTGACGCTC-CTGGCCTCCTC 146417 ||| |||| ||| |||||||| |||| | ||| | |||| | ||||| Sbjct 5390126 GTCAGGGCCGCGTGGTAGATGGTCTCGAAGATCTGCTTGTTCA-GCTCGCGCGCCTCGGG 5390068 Query 146418 GCTGTCGTAGGGGATATCGAGAAGC---ACAAAGGCGTCGGCGAGACCCTGTATCCCGAC 146474 | ||| |||| || | | ||| | |||||||||||||| ||||| | ||||| Sbjct 5390067 GGACTCGAAGGGCAT---GCGCAGCGCGAGGAAGGCGTCGGCGAGGCCCTGGACGCCGAC 5390011 Query 146475 ACCAACGGGGCGGTGTTTCTTGTTACTGTT-CGCAGCGCCCGCAGTGGGATAGTGGTTGC 146533 || | ||| ||||| ||| ||||| ||| | || | | ||| ||||||||| Sbjct 5390010 GCCGATGGGTCGGTGGCGGAAGTTGCTGTTGCGCGCCTCCTGGA-CGGGGTAGTGGTTGA 5389952 Query 146534 TGTCGATGATCTTGTTGAGATTACGCACGACAATTTTCGTCAAACGATTCAGC------A 146587 ||||||||| |||||| || || ||||| | ||||| | |||| | Sbjct 5389951 CGTCGATGATGCGGTTGAGGTTGCGGACGACGACGCGCGTCACCTCGTGCAGCTTCTTGA 5389892 Query 146588 GGACATAGTCAAATGTTTTAGTTTTAACGTTGACGCACTTGTTGACGGCGATAGAGGCCA 146647 | | ||| || | | ||| || || ||| | | ||||| || || | Sbjct 5389891 AGTCGTAG-CA---GCCCTCGTTGTA--GTCGACAAAGGCCGGCAGGGCGAGCGACGCGA 5389838 Query 146648 AGTTACATACGGCAGTCTCGTCCTTGTCGC--AATACTGCACAATCTCGGCGCAGAGGTT 146705 ||| || ||||| |||||| | ||| | |||| | ||||||| ||| ||||| Sbjct 5389837 GGTTGCAGACGGCCACCTCGTC--GGGCGCCGAGTACTCGATGATCTCGGTGCACAGGTT 5389780 Query 146706 GCTGCACTTGATGATGCCCAAAtttttttGGTTACTAAACTT---GTTGCAGGGGTCCTT 146762 | || ||| | || | || || ||||| || ||| |||||| | |||||| Sbjct 5389779 GGAGCTGCGGATCGTCCCGAGGTTCTTCTGGTTGCT---CTTGCGGTTGCACGCGTCCTT 5389723 Query 146763 GTAGAGCATGTA-CGGTCCCCCGGTTTCGACATTGGTCTCGACGAT-GAATCTAAACAAA 146820 ||| |||||| | ||| |||| | || | | || ||||| ||| || | | || | Sbjct 5389722 GTACAGCATGAAGGGGTTGCCCGTCTCCGTC-TGGGCCTCGAGGATCGAGT---ACCAGA 5389667 Query 146821 TC-TCTGGCCTTTACTTGTCTTTCGTAC-AGTTTATTCTTTTCGTATTTCTCGTACAATA 146878 | ||||| | ||||| || | | | ||||| || ||||||| Sbjct 5389666 GCTTCTGGGCGCGGACCGTCTTGCGGCCGCGGCCCTCGCGCTCGTACTTTTCGTACAGCG 5389607 Query 146879 TTTCAAAACTAG-AACCGTACTCGTCGAGGAGGCCGGGATACTTTTTGGGACAGAACAGC 146937 || |||| | ||||| |||| ||||||||| ||| ||||| || | ||| Sbjct 5389606 CCTC-GAACTCGTCGCCGTAGCAGTCGGCGAGGCCGGGGCACTCGTTGGGGCACATGAGC 5389548 Query 146938 GACCATTCTTTATTCTCCTTCACGCGTTCCATAAACAAATCGGGAATCCAAAGGCCCAGC 146997 | ||| || |||| || ||||| | ||| || | ||||| ||||| || | || Sbjct 5389547 GTCCAGTCGCCGTTCTTCTCGACGCGCTTCATGAAGAGGTCGGGGATCCAGAGCGCGAGG 5389488 Query 146998 ATCAAGTCGCGAGCCTTGGCGTCCTCGGAGCCCATGTTGCGTCTCAAGTTGAGGACATCG 147057 | || |||||| || | ||||| ||| ||| | || || ||| | || Sbjct 5389487 AACAGGTCGCGCGCGCGCACCTCCTCCTTGCCGTGGTTCTTGCGCAGGTCGAGAAACTCA 5389428 Query 147058 TAAATTTCCGGATGCCAAGGCTCCACGTATGCGGCGAGTGCGCCTTTTCGC---TTACCG 147114 ||| || | ||||| || |||| ||| ||||| ||||| ||| || ||| Sbjct 5389427 AAAACGTCGGCGTGCCACGGTTCCAGGTAGATGGCGAAGGCGCCCGGCCGCTTGTTGCCG 5389368 Query 147115 CCCTGATCGACGTGGCGCACCATGTTATTGAAGACTCGTAACATGGACACGAGGCCGCCG 147174 ||||| ||||||| || || |||| |||||||| || | ||||| | || |||| | Sbjct 5389367 CCCTGGTCGACGTACCGGGCCGTGTTGTTGAAGACGCGAAGCATGGGCGTGATGCCGTTG 5389308 Query 147175 GATTT---TGTGGTGCCG---TTGTA-------TTGAGCGCTGACGCTTTGCACGCTCAG 147221 || | |||||||| |||| || |||| || || || | | | || Sbjct 5389307 GAGGTACCGTTGGTGCCGGCAATGTAGGATCCGGTG-GCGCGGATGCGGTGGATGTTGAG 5389249 Query 147222 CCCGAGACCTCCGCCCAGATTCGAAATCAAAGCGGAC-TCGTGCAAGGTCTTGTAGATGC 147280 |||| || ||| ||| || || |||| ||| || || || | || | |||||||| Sbjct 5389248 GCCGATGCCGCCGGCCATCTTGGAGATCATGGCGCACGTCTTG-AGCGTGTCGTAGATGC 5389190 Query 147281 CGTCGATGCTGTCTTCCTTGATGCATTGCAGGAAACACGAACACATTTGGGGACGACACG 147340 | ||||||||||| ||||| ||| ||||| ||||| ||| || | | || Sbjct 5389189 CCTCGATGCTGTCGTCCTTCATGTCGACGAGGAAGCACGACGACAGCTGCGCCTGCGGCG 5389130 Query 147341 TGCCCGCCGCAAACAGCGTGGGGCTGGCGTGCGTGAA---CGTGCCCAGACTCATCA-AT 147396 |||| || || ||||| || |||||||||||| | ||| | || ||| | || Sbjct 5389129 TGCCGGCGTTGAAGAGCGTCGGCGAGGCGTGCGTGAACATCTTGCTC-GA--CATGAGAT 5389073 Query 147397 TGATACGTTTCAATGGCGCTCATAACGTCATCGCCGTGAATGGCCAGGGCGACGCGCATG 147456 || ||||| || ||| ||| | | || ||||| ||| | | | ||||||||| Sbjct 5389072 TG-TACGTCTCGATGACGCGCTCGATGTTGTCGCCCCAGATGCCGACCGACACGCGCATG 5389014 Query 147457 AGCATGTGCTGGGGTCGTTCCGCAATCACGTCATTGACTTTTAATAGATATCCATTGGTC 147516 | ||||||||| ||||| || | ||| | | |||| || | || || || | || Sbjct 5389013 ATCATGTGCTGCGGTCGCTCGACGATCTTGCCGTTGAGCTTGAGGAGGTA-GGATCGCTC 5388955 Query 147517 -AGAGTTTTGAAACCAAAGTACTTGTAGTCGTAGTCCCTGTTGT 147559 ||||| ||||| |||||||||| ||||| | |||| | || || Sbjct 5388954 GAGAGTCTTGAAGCCAAAGTACTGGTAGTTGAAGTCGCGGTCGT 5388911 Score = 111 bits (122), Expect = 1e-19 Identities = 142/193 (74%), Gaps = 2/193 (1%) Strand=Plus/Plus Query 126922 CTCTTTTTGAATATTGTAATCGCCCATCGTGCGAGAATCGTCTAGCTGTTTTCCAGCGTA 126981 ||| || || || ||||| |||| || ||||| ||| || ||||| || || ||| | Sbjct 625507 CTCCTTCTGGATGTTGTAGTCGCTCAGGGTGCGGCCATCCTCGAGCTGCTTGCCGGCGAA 625566 Query 126982 GATCAATCGCTGCTGATCGGGAGGTATGCCCTCCTTGTCCGTGATTTTCTGCTTGA-GTT 127040 ||| | ||||| || ||||| || ||||||||||||||| ||| || ||||| ||| Sbjct 625567 GATGAGGCGCTGTTGGTCGGGGGGGATGCCCTCCTTGTCCTGGATCTTGGACTTGACGTT 625626 Query 127041 GTTCGACGGTGTCCGTACTCTCGACTTCGACGGTCACCGTTTTGCCGGTCAGAGTTTTTA 127100 | |||| |||||| | | ||| || || | ||| | ||| || || || || || || | Sbjct 625627 G-TCGATGGTGTCGGAAGACTCCACCTCAAGGGTGATCGTCTTCCCCGTGAGGGTCTTGA 625685 Query 127101 CAAAAATCTGCAT 127113 | ||||||||||| Sbjct 625686 CGAAAATCTGCAT 625698 Score = 98.7 bits (108), Expect = 9e-16 Identities = 126/174 (72%), Gaps = 0/174 (0%) Strand=Plus/Plus Query 126916 CGTAGACTCTTTTTGAATATTGTAATCGCCCATCGTGCGAGAATCGTCTAGCTGTTTTCC 126975 ||| ||||| || || || ||||||||| || || || ||| || ||||| || || Sbjct 4593417 CGTCGACTCCTTCTGGATGTTGTAATCGGACAAGGTCCGGCCATCCTCGAGCTGCTTGCC 4593476 Query 126976 AGCGTAGATCAATCGCTGCTGATCGGGAGGTATGCCCTCCTTGTCCGTGATTTTCTGCTT 127035 ||| | |||| |||||||| |||||||| ||||||||||||||| ||| ||| ||| Sbjct 4593477 GGCGAAAATCAGGCGCTGCTGGTCGGGAGGGATGCCCTCCTTGTCCTGGATCTTCGACTT 4593536 Query 127036 GAGTTGTTCGACGGTGTCCGTACTCTCGACTTCGACGGTCACCGTTTTGCCGGT 127089 || | |||| ||||||| |||||| || | || | || ||||| || Sbjct 4593537 GACATTGTCGATCGTGTCCGACGACTCGACCTCAAGCGTGATGGTCTTGCCCGT 4593590 Score = 95.1 bits (104), Expect = 1e-14 Identities = 160/229 (70%), Gaps = 2/229 (1%) Strand=Plus/Plus Query 126887 CCACCGCGTAATCGCAACACCAAATGTATCGTAGACTCTTTTTGAATATTGTAATCGCCC 126946 || ||||| | |||| || | ||||| || ||| || || || ||||| |||| | Sbjct 4592868 CCGCCGCGCAGGCGCAGTACAAGATGTAGAGTGCTCTCCTTCTGGATGTTGTAGTCGCTC 4592927 Query 126947 ATCGTGCGAGAATCGTCTAGCTGTTTTCCAGCGTAGATCAATCGCTGCTGATCGGGAGGT 127006 | || || || || ||||| || || ||| | |||| |||||||| ||||| || Sbjct 4592928 AAGGTACGGCCGTCCTCGAGCTGCTTGCCGGCGAAAATCAGGCGCTGCTGGTCGGGCGGG 4592987 Query 127007 ATGCCCTCCTTGTCCGTGAT-TTTCTGCTTGAGTTGTTCGACGGTGTCCGTACTCTCGAC 127065 ||||||||||||||| || || || || |||| |||| ||||||| || || Sbjct 4592988 ATGCCCTCCTTGTCCTGAATCTTGCTCTTTACGTTG-TCGATTGTGTCCGACGATTCCAC 4593046 Query 127066 TTCGACGGTCACCGTTTTGCCGGTCAGAGTTTTTACAAAAATCTGCATG 127114 || | || | ||| |||||||||| || || || || ||||||||| Sbjct 4593047 CTCCAACGTGATCGTCTTGCCGGTCAACGTCTTGACGAAGATCTGCATG 4593095 Score = 91.5 bits (100), Expect = 1e-13 Identities = 149/215 (69%), Gaps = 0/215 (0%) Strand=Plus/Plus Query 126887 CCACCGCGTAATCGCAACACCAAATGTATCGTAGACTCTTTTTGAATATTGTAATCGCCC 126946 |||||||| | || | || | || | ||| ||||| || || || ||||| |||| | Sbjct 4593096 CCACCGCGGAGACGGAGGACGAGGTGGAGCGTCGACTCCTTCTGGATGTTGTAGTCGCTC 4593155 Query 126947 ATCGTGCGAGAATCGTCTAGCTGTTTTCCAGCGTAGATCAATCGCTGCTGATCGGGAGGT 127006 | || || || || ||||| || || || |||| | || ||||| || || || Sbjct 4593156 AGGGTCCGGCCGTCCTCGAGCTGCTTGCCGGCAAAGATGAGGCGTTGCTGGTCAGGCGGG 4593215 Query 127007 ATGCCCTCCTTGTCCGTGATTTTCTGCTTGAGTTGTTCGACGGTGTCCGTACTCTCGACT 127066 ||||||||||||||| ||| ||| ||||| | |||| ||||||| | ||| || Sbjct 4593216 ATGCCCTCCTTGTCCTGGATCTTCGACTTGACATTGTCGATTGTGTCCGAAGACTCCACC 4593275 Query 127067 TCGACGGTCACCGTTTTGCCGGTCAGAGTTTTTAC 127101 |||| ||| | || ||||| || || || || || Sbjct 4593276 TCGAGGGTGATGGTCTTGCCCGTGAGTGTCTTGAC 4593310 >seq1 Length=12542233 Score = 91.5 bits (100), Expect = 1e-13 Identities = 109/148 (74%), Gaps = 0/148 (0%) Strand=Plus/Plus Query 126958 ATCGTCTAGCTGTTTTCCAGCGTAGATCAATCGCTGCTGATCGGGAGGTATGCCCTCCTT 127017 ||| || ||||| || ||||| ||||||||| |||||||| || || ||||||||||| Sbjct 3488322 ATCTTCGAGCTGCTTACCAGCAAAGATCAATCTTTGCTGATCCGGGGGAATGCCCTCCTT 3488381 Query 127018 GTCCGTGATTTTCTGCTTGAGTTGTTCGACGGTGTCCGTACTCTCGACTTCGACGGTCAC 127077 |||| ||| || ||||| | |||| ||||| | | ||||||||| | || | Sbjct 3488382 GTCCTGGATCTTGGACTTGACATTGTCGATAGTGTCAGAAGACTCGACTTCAAGCGTAAT 3488441 Query 127078 CGTTTTGCCGGTCAGAGTTTTTACAAAA 127105 ||| ||||| || || || || || ||| Sbjct 3488442 CGTCTTGCCCGTTAGGGTCTTCACGAAA 3488469 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 475500633574720