Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Drechmeria_20coniospora_20[genbank_20GCA_5F001625195.1_202016-04-24] 28 sequences; 32,831,003 total letters Query= NC_012639.1 Length=141291 Score E Sequences producing significant alignments: (Bits) Value seq3 116 3e-21 seq1 82.4 7e-11 >seq3 Length=9751215 Score = 116 bits (128), Expect = 3e-21 Identities = 426/658 (65%), Gaps = 17/658 (3%) Strand=Plus/Plus Query 122898 AAGGTCGCCGAACGTATTCAACATATGCTCATGCGCGTCGCTATAGGCGTGCACGGACG- 122956 ||| ||| ||| || || || ||| |||||||||| | | ||| | | || || Sbjct 5388985 AAGATCGTCGAGCGACCGCAGCACATGATCATGCGCGTGTCGGTCGGCAT-CTGGGGCGA 5389043 Query 122957 CGACATCGAAAACGCGACCGAAACTTACGATTTGATGTCTCAAAAATTTTTCACGCACGC 123016 | ||||||| || | ||| || ||| || | ||||| || | ||||||||||| Sbjct 5389044 CAACATCGAGCGCGTCATCGAGACGTACAATCTCATGTCGAGCAAGATGTTCACGCACGC 5389103 Query 123017 GAGTCCCACTTTGTTCGCCGCCGGCACGAAGTTGCCTCAGTTGTCTTCGTGTTTTTTGCT 123076 || || | ||| |||||||||| | | | ||| |||| ||||| || | | Sbjct 5389104 CTCGCCGACGCTCTTCAACGCCGGCACGCCGCAGGCGCAGCTGTCGTCGTGCTTCCTCGT 5389163 Query 123077 CACCTTGCGCGAAGACAGCATCACCGGTATCTATGAAACTTTGCGCGAT-TGCGCGTTGA 123135 | | || || ||||||||| || ||||| || || | | || ||||| ||| Sbjct 5389164 CGACATGAAGGACGACAGCATCGAGGGCATCTACGACACGCT-CAAGACGTGCGCCATGA 5389222 Query 123136 TTTCCAAATTTGGCGGCGGCATAGGCGTGAACGTGCACGACGTAAGAGGCCGCGGAAGCC 123195 | ||||| | | ||||||||| ||| | ||| | ||| | | | | | |||| | Sbjct 5389223 TCTCCAAGATGGCCGGCGGCATCGGCCTCAACATCCACCGCATCCGCGCCACCGGATCCT 5389282 Query 123196 GCATCAGAAGCACCGACGGAATCGCCTCCGGGCTCGAATCCATGCTGCGAGTTTACAATA 123255 ||| ||||| |||| | | || ||| || ||||||| || || | ||| | Sbjct 5389283 ACATTGCCGGCACCAACGGTACCTCCAACGGCATCACGCCCATGCTTCGCGTCTTCAACA 5389342 Query 123256 ACGCCGTGCGGCACGTCGACCAGGGCGG---CAAACGCAAAGGCGCGATGGCGATCTATC 123312 || | | ||| |||||||||||||||| ||| || ||||| | || ||||| | Sbjct 5389343 ACACGGCCCGGTACGTCGACCAGGGCGGCAACAAGCGGCCGGGCGCCTTCGCCATCTACC 5389402 Query 123313 TAGAACCGTGGCACGTTGATGTGTACGATTTTTTAAATTTAAAACGC---AACATGGGGG 123369 | ||||||||||||| || || | || ||| | | | ||| ||| || Sbjct 5389403 TGGAACCGTGGCACGCCGACGTTTTTGAGTTTCTCGACCT---GCGCAAGAACCACGGCA 5389459 Query 123370 CGGAAGAAAAGAAAGCCCGCGATTTGTTGTACGCTTTATGGGTACCCGATTTGTTTATGC 123429 ||| || | || ||||| |||| ||| | ||| | ||||| | || ||| Sbjct 5389460 AGGAGGAGGTGCGCGCGCGCGACCTGTTCCTCGCGCTCTGGATCCCCGACCTCTTCATGA 5389519 Query 123430 GACGCGT--AAAAGACGACGGCGTGTGGTCGCTCATGTGTCCCGATCGGTGTCCCGGCTT 123487 ||||| | |||| |||||| ||| |||||||||| ||| | ||| |||||| | Sbjct 5389520 AGCGCGTCGAGAAGA--ACGGCGACTGGACGCTCATGTGCCCCAACGAGTGCCCCGGCCT 5389577 Query 123488 GAGCGACGTTTACGGCAATCAGTTTGACGAGTTGTACGCGCAATACGAGCGCGAAGGC 123545 |||| |||||| | |||| || | | |||||| | ||||||||||| ||| Sbjct 5389578 CGCCGACTGCTACGGCGACGAGTTCGAGGCGCTGTACGAAAAGTACGAGCGCGAGGGC 5389635 Score = 86.0 bits (94), Expect = 6e-12 Identities = 158/229 (69%), Gaps = 2/229 (1%) Strand=Plus/Plus Query 45114 CCTCCGCGGAGCCTCAACACTAGATGCAGCGTTGATTCCTTTTGGATATTATAATCGCTG 45173 || || ||||| | || ||| || ||||| || ||||| ||||| || || ||||| Sbjct 625472 CCACCACGGAGGCGCAGCACGAGGTGCAGGGTGCTCTCCTTCTGGATGTTGTAGTCGCTC 625531 Query 45174 ACGGTTTTAGAATCGTCCAATTGTTTTCCTGCGTATATCAATCGTTGCTGGTCCGGCGGA 45233 | ||| ||| || | || || || ||| | || | || || ||||| || || Sbjct 625532 AGGGTGCGGCCATCCTCGAGCTGCTTGCCGGCGAAGATGAGGCGCTGTTGGTCGGGGGGG 625591 Query 45234 ATGCCTTCTTTATCTTGAATTTTTTGTTTGATCGCT-TCTACGGTGTCGGAAGACTCGAC 45292 ||||| || || || || || || |||| || | || | ||||||||||||||| || Sbjct 625592 ATGCCCTCCTTGTCCTGGATCTTGGACTTGA-CGTTGTCGATGGTGTCGGAAGACTCCAC 625650 Query 45293 TTCGAGAGTAACCGTTTTGCCGGTTAGAGTTTTTACAAAAATTTGCATC 45341 || || || | ||| || || || || || || || ||||| |||||| Sbjct 625651 CTCAAGGGTGATCGTCTTCCCCGTGAGGGTCTTGACGAAAATCTGCATC 625699 >seq1 Length=12542233 Score = 82.4 bits (90), Expect = 7e-11 Identities = 92/123 (75%), Gaps = 0/123 (0%) Strand=Plus/Plus Query 45210 ATCAATCGTTGCTGGTCCGGCGGAATGCCTTCTTTATCTTGAATTTTTTGTTTGATCGCT 45269 ||||||| |||||| ||||| |||||||| || || || || || || |||| Sbjct 3488347 ATCAATCTTTGCTGATCCGGGGGAATGCCCTCCTTGTCCTGGATCTTGGACTTGACATTG 3488406 Query 45270 TCTACGGTGTCGGAAGACTCGACTTCGAGAGTAACCGTTTTGCCGGTTAGAGTTTTTACA 45329 || | ||||| |||||||||||||| || |||| ||| ||||| ||||| || || || Sbjct 3488407 TCGATAGTGTCAGAAGACTCGACTTCAAGCGTAATCGTCTTGCCCGTTAGGGTCTTCACG 3488466 Query 45330 AAA 45332 ||| Sbjct 3488467 AAA 3488469 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 452003041798880