Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Drechmeria_20coniospora_20[genbank_20GCA_5F001625195.1_202016-04-24]
28 sequences; 32,831,003 total letters
Query= NC_012639.1
Length=141291
Score E
Sequences producing significant alignments: (Bits) Value
seq3 116 3e-21
seq1 82.4 7e-11
>seq3
Length=9751215
Score = 116 bits (128), Expect = 3e-21
Identities = 426/658 (65%), Gaps = 17/658 (3%)
Strand=Plus/Plus
Query 122898 AAGGTCGCCGAACGTATTCAACATATGCTCATGCGCGTCGCTATAGGCGTGCACGGACG- 122956
||| ||| ||| || || || ||| |||||||||| | | ||| | | || ||
Sbjct 5388985 AAGATCGTCGAGCGACCGCAGCACATGATCATGCGCGTGTCGGTCGGCAT-CTGGGGCGA 5389043
Query 122957 CGACATCGAAAACGCGACCGAAACTTACGATTTGATGTCTCAAAAATTTTTCACGCACGC 123016
| ||||||| || | ||| || ||| || | ||||| || | |||||||||||
Sbjct 5389044 CAACATCGAGCGCGTCATCGAGACGTACAATCTCATGTCGAGCAAGATGTTCACGCACGC 5389103
Query 123017 GAGTCCCACTTTGTTCGCCGCCGGCACGAAGTTGCCTCAGTTGTCTTCGTGTTTTTTGCT 123076
|| || | ||| |||||||||| | | | ||| |||| ||||| || | |
Sbjct 5389104 CTCGCCGACGCTCTTCAACGCCGGCACGCCGCAGGCGCAGCTGTCGTCGTGCTTCCTCGT 5389163
Query 123077 CACCTTGCGCGAAGACAGCATCACCGGTATCTATGAAACTTTGCGCGAT-TGCGCGTTGA 123135
| | || || ||||||||| || ||||| || || | | || ||||| |||
Sbjct 5389164 CGACATGAAGGACGACAGCATCGAGGGCATCTACGACACGCT-CAAGACGTGCGCCATGA 5389222
Query 123136 TTTCCAAATTTGGCGGCGGCATAGGCGTGAACGTGCACGACGTAAGAGGCCGCGGAAGCC 123195
| ||||| | | ||||||||| ||| | ||| | ||| | | | | | |||| |
Sbjct 5389223 TCTCCAAGATGGCCGGCGGCATCGGCCTCAACATCCACCGCATCCGCGCCACCGGATCCT 5389282
Query 123196 GCATCAGAAGCACCGACGGAATCGCCTCCGGGCTCGAATCCATGCTGCGAGTTTACAATA 123255
||| ||||| |||| | | || ||| || ||||||| || || | ||| |
Sbjct 5389283 ACATTGCCGGCACCAACGGTACCTCCAACGGCATCACGCCCATGCTTCGCGTCTTCAACA 5389342
Query 123256 ACGCCGTGCGGCACGTCGACCAGGGCGG---CAAACGCAAAGGCGCGATGGCGATCTATC 123312
|| | | ||| |||||||||||||||| ||| || ||||| | || ||||| |
Sbjct 5389343 ACACGGCCCGGTACGTCGACCAGGGCGGCAACAAGCGGCCGGGCGCCTTCGCCATCTACC 5389402
Query 123313 TAGAACCGTGGCACGTTGATGTGTACGATTTTTTAAATTTAAAACGC---AACATGGGGG 123369
| ||||||||||||| || || | || ||| | | | ||| ||| ||
Sbjct 5389403 TGGAACCGTGGCACGCCGACGTTTTTGAGTTTCTCGACCT---GCGCAAGAACCACGGCA 5389459
Query 123370 CGGAAGAAAAGAAAGCCCGCGATTTGTTGTACGCTTTATGGGTACCCGATTTGTTTATGC 123429
||| || | || ||||| |||| ||| | ||| | ||||| | || |||
Sbjct 5389460 AGGAGGAGGTGCGCGCGCGCGACCTGTTCCTCGCGCTCTGGATCCCCGACCTCTTCATGA 5389519
Query 123430 GACGCGT--AAAAGACGACGGCGTGTGGTCGCTCATGTGTCCCGATCGGTGTCCCGGCTT 123487
||||| | |||| |||||| ||| |||||||||| ||| | ||| |||||| |
Sbjct 5389520 AGCGCGTCGAGAAGA--ACGGCGACTGGACGCTCATGTGCCCCAACGAGTGCCCCGGCCT 5389577
Query 123488 GAGCGACGTTTACGGCAATCAGTTTGACGAGTTGTACGCGCAATACGAGCGCGAAGGC 123545
|||| |||||| | |||| || | | |||||| | ||||||||||| |||
Sbjct 5389578 CGCCGACTGCTACGGCGACGAGTTCGAGGCGCTGTACGAAAAGTACGAGCGCGAGGGC 5389635
Score = 86.0 bits (94), Expect = 6e-12
Identities = 158/229 (69%), Gaps = 2/229 (1%)
Strand=Plus/Plus
Query 45114 CCTCCGCGGAGCCTCAACACTAGATGCAGCGTTGATTCCTTTTGGATATTATAATCGCTG 45173
|| || ||||| | || ||| || ||||| || ||||| ||||| || || |||||
Sbjct 625472 CCACCACGGAGGCGCAGCACGAGGTGCAGGGTGCTCTCCTTCTGGATGTTGTAGTCGCTC 625531
Query 45174 ACGGTTTTAGAATCGTCCAATTGTTTTCCTGCGTATATCAATCGTTGCTGGTCCGGCGGA 45233
| ||| ||| || | || || || ||| | || | || || ||||| || ||
Sbjct 625532 AGGGTGCGGCCATCCTCGAGCTGCTTGCCGGCGAAGATGAGGCGCTGTTGGTCGGGGGGG 625591
Query 45234 ATGCCTTCTTTATCTTGAATTTTTTGTTTGATCGCT-TCTACGGTGTCGGAAGACTCGAC 45292
||||| || || || || || || |||| || | || | ||||||||||||||| ||
Sbjct 625592 ATGCCCTCCTTGTCCTGGATCTTGGACTTGA-CGTTGTCGATGGTGTCGGAAGACTCCAC 625650
Query 45293 TTCGAGAGTAACCGTTTTGCCGGTTAGAGTTTTTACAAAAATTTGCATC 45341
|| || || | ||| || || || || || || || ||||| ||||||
Sbjct 625651 CTCAAGGGTGATCGTCTTCCCCGTGAGGGTCTTGACGAAAATCTGCATC 625699
>seq1
Length=12542233
Score = 82.4 bits (90), Expect = 7e-11
Identities = 92/123 (75%), Gaps = 0/123 (0%)
Strand=Plus/Plus
Query 45210 ATCAATCGTTGCTGGTCCGGCGGAATGCCTTCTTTATCTTGAATTTTTTGTTTGATCGCT 45269
||||||| |||||| ||||| |||||||| || || || || || || ||||
Sbjct 3488347 ATCAATCTTTGCTGATCCGGGGGAATGCCCTCCTTGTCCTGGATCTTGGACTTGACATTG 3488406
Query 45270 TCTACGGTGTCGGAAGACTCGACTTCGAGAGTAACCGTTTTGCCGGTTAGAGTTTTTACA 45329
|| | ||||| |||||||||||||| || |||| ||| ||||| ||||| || || ||
Sbjct 3488407 TCGATAGTGTCAGAAGACTCGACTTCAAGCGTAATCGTCTTGCCCGTTAGGGTCTTCACG 3488466
Query 45330 AAA 45332
|||
Sbjct 3488467 AAA 3488469
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 452003041798880
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |