Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Drechmeria_20coniospora_20[genbank_20GCA_5F001625195.1_202016-04-24] 28 sequences; 32,831,003 total letters Query= NC_013668.3 Length=248526 Score E Sequences producing significant alignments: (Bits) Value seq3 143 4e-29 >seq3 Length=9751215 Score = 143 bits (158), Expect = 4e-29 Identities = 333/494 (67%), Gaps = 6/494 (1%) Strand=Plus/Minus Query 203839 CTTGTCCACCGTGAACTGAATGGCGTTCACGGCAGGCCTGCTTCT-CAGATAGTACATGC 203897 || ||| || |||||||| |||| |||| ||| ||| || ||| |||||||||| Sbjct 5390766 CTGGTCGACGGTGAACTGGATGGGCGCGGCGGC-GGCTTGCGTCCGCAGGTAGTACATGC 5390708 Query 203898 CGGTCTTTAGGCCCTTCTGCCACCCGTACATGTGCATGGAAGACAGTTTGCTCACGTTGG 203957 | ||||| ||||| || ||| ||| | ||||||| | | |||| || | | | Sbjct 5390707 CCGTCTTGAGGCCGAGCTTCCAGCCGGCAAAGTGCATGCTCGTGATCTTGCCCATGGTCG 5390648 Query 203958 GGTCGGCCATGTGAATGTTCAGAGACTGGCTTTGGTCGATGAAAGGCGCC-CGATCTGCG 204016 |||| |||||||||||| || |||||| ||||||||| |||||||| || || || Sbjct 5390647 GGTCCTTCATGTGAATGTTGAGCGACTGGGACTGGTCGATG-AAGGCGCCGCGGTCGGCC 5390589 Query 204017 GCCATATTGATAATGGTCTTCTGCGAAATCTCCCACACCGTCTTGAACACGTCTCTGGTG 204076 ||||| | | | | ||||||||||||||| ||||||||| | | | | || || Sbjct 5390588 GCCATCTGCACCACCTGCCGCTGCGAAATCTCCCAGACCGTCTTGTAGAGGGCCTTGATG 5390529 Query 204077 TGTTGAGGCACATCTTCCCACGTCCT-GATCGAGCCGTTGTCGGCCATCAGTCTCATCCT 204135 | || | | | | | || || |||||| ||||| || || || | | || | Sbjct 5390528 TCGGCCGGGATGT-TGGCAATGTTCTGGATCGACCCGTTCTCCGCGATGATGCGGTTCTT 5390470 Query 204136 CGTCTCCTCCCCCCACATGCCCAACCTGATCAGCTCCCGCACCAGGTGGGGGTTGATGAT 204195 | || | || ||| | |||| || || ||| | ||| |||||||| | Sbjct 5390469 CATCGCGTCGGACCAGAGTCCCATGTCGACGAGGTCCTTGAGCAGCCAGGGGTTGACCAC 5390410 Query 204196 CTGAAAGTCTCCGGACAGCACCCCTCGGGTGAACAGGTTGTTGGTGAATGGTTCGAACGC 204255 |||||| || |||| || || | || | | | |||| ||| | || ||||| Sbjct 5390409 CTGAAACTCGCCGGCGAGGACGCGGCGCTGGTAGATGTTGGACGTGTACGGCTCGAAGCA 5390350 Query 204256 CTCGTTGTTGCCGAAAATCTGAGCGGTGCTGGCCGTGGGCATGGGAGCCAGGAGCAGGGA 204315 |||||||||||| | ||||| | ||||||||||| ||||| || || || |||||| Sbjct 5390349 CTCGTTGTTGCCCAGGATCTGCGACGTGCTGGCCGTCGGCATCGGCGCGAGCAGCAGGCT 5390290 Query 204316 GTTGCGCACACCGT 204329 |||||| | |||| Sbjct 5390289 GTTGCGGATGCCGT 5390276 Score = 122 bits (134), Expect = 1e-22 Identities = 332/500 (66%), Gaps = 15/500 (3%) Strand=Plus/Plus Query 159650 TTCTCGAAAAAGTTGGTCTTGCCCTCCATGGATATTGATTCCATGAACCCGAATGGGTTC 159709 |||||||| || ||||||||||| | | ||| || |||||||| |||| |||||| Sbjct 2598617 TTCTCGAAGAAATTGGTCTTGCCACCGAGGGAGATGTTCTCCATGAAGTCGAAGGGGTTC 2598676 Query 159710 TTCACGTGATAGCGCTTCGGAAATCCGAGAGCCGCCAGCAACCTGTCTGCCACAAATTCG 159769 | | || |||| |||||||| | || | | || || || || ||| Sbjct 2598677 GACGATTTGTACACCTTCTCGTTGCCGAGAGCAACAAGGAGACGATCGGCAACGAACTCG 2598736 Query 159770 ATGTAGCTACA-CATCT-GCTCACAGTTGATCCCCAGCAGCCTAACGGGGAGCGCTTCCG 159827 ||||| || | |||| | | || || || || ||||| | ||||| || || | Sbjct 2598737 ATGTA-CTGCTTCATCAAGGTGGCA-TTCATGCCGAGCAGAGCACATGGGAGGGCCTCGG 2598794 Query 159828 ACAGAAACTCCTTCTCAATCTCGACCGCTTCGGTCACAATCTGCGAGAC-ACGTTCGTAC 159886 || ||||||| |||||| ||| || ||||| | || | || || ||| | | Sbjct 2598795 TGAGGAACTCCTGCTCAATGGTGACGGCGTCGGTGATGATGTCGTTGATGACCTTCTTGC 2598854 Query 159887 ---CCCGGCTTGCCCAAAATGTGGTCCTTAAACAGGAGGCACGCAAAGTCGCAGTGCAGT 159943 ||||| ||| || ||| | | || ||||||||||| ||| ||| || Sbjct 2598855 TGGCCCGG-TTGT------TGAGGTGCGAATGCAACAGGCACGCAAAATCGGTGTGAAGA 2598907 Query 159944 CCCTCGTCCCGAGAGATGAACTCGTTGGACATGATGAGGCCCGGCATGATCCCACGCGGT 160003 ||||| || || ||||||| ||||||||| | | || || ||||||| || ||| Sbjct 2598908 CCCTCATCACGCGAGATGAGCTCGTTGGAGAATGTCAGACCAGGCATGAGACCGCGCTTC 2598967 Query 160004 TTGAGCCAAAAAATGGCCGCAAAAGCACCGCTAAAAAAGATCCCCTCCACGGCCGCAAAC 160063 || ||||| || || | || ||||||||||| || ||||| || || ||||| ||||| Sbjct 2598968 TTCAGCCAGAAGATTGAGGCGAAAGCACCGCTGAAGAAGATGCCTTCGACGGCGGCAAAG 2599027 Query 160064 GCCACGAGCCTCTCACCAAAAGAGGCGTTGGTGTCATGGGTCCACCTTTTGGCCCATTCA 160123 || || || || | | || | || | |||| ||| |||| | |||||| ||| Sbjct 2599028 GCAACAAGTCTTTGGGCGAACGTGGACTCCTTGTCTTGGATCCAACGCAGGGCCCAATCA 2599087 Query 160124 GCCTTCTTTGCGATGCACGG 160143 |||||||| |||||| || Sbjct 2599088 GCCTTCTTGCGGATGCAAGG 2599107 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 795154921695680