Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Drechmeria_20coniospora_20[genbank_20GCA_5F001625195.1_202016-04-24] 28 sequences; 32,831,003 total letters Query= NC_013772.1 Length=176677 Score E Sequences producing significant alignments: (Bits) Value seq3 161 1e-34 seq1 84.2 2e-11 >seq3 Length=9751215 Score = 161 bits (178), Expect = 1e-34 Identities = 167/216 (77%), Gaps = 2/216 (1%) Strand=Plus/Plus Query 46379 CGCAACACCAGATGCAATGTACTCTCCTTTTGGATATTGTAGTCGGATAGAGTGCGCTCG 46438 |||| || ||||| | || |||||||| ||||| ||||||||| | || || || Sbjct 4592880 CGCAGTACAAGATGTAGAGTGCTCTCCTTCTGGATGTTGTAGTCGCTCAAGGTACGGCCG 4592939 Query 46439 TCGTCGAGCTGCTTGCCGGCGAATATCAAGCGCTGCTGGTCGGCCGGCACGCTCTCCTTG 46498 || |||||||||||||||||||| |||| |||||||||||||| ||| | || ||||||| Sbjct 4592940 TCCTCGAGCTGCTTGCCGGCGAAAATCAGGCGCTGCTGGTCGGGCGGGATGCCCTCCTTG 4592999 Query 46499 TCCATGATCTTCTTCTTGAGCGTCG-CCACCGTGTCGCTCGATTCCACATCCACCGTGAT 46557 ||| ||||| |||| | ||| | | | ||||| ||||||||| |||| |||||| Sbjct 4593000 TCCTGAATCTTGCTCTTTA-CGTTGTCGATTGTGTCCGACGATTCCACCTCCAACGTGAT 4593058 Query 46558 GGTTTTGCCCGTCAGCGTTTTAACAAAGATTTGCAT 46593 || ||||| |||| ||| || || ||||| ||||| Sbjct 4593059 CGTCTTGCCGGTCAACGTCTTGACGAAGATCTGCAT 4593094 Score = 143 bits (158), Expect = 3e-29 Identities = 166/221 (75%), Gaps = 2/221 (1%) Strand=Plus/Plus Query 46379 CGCAACACCAGATGCAATGTACTCTCCTTTTGGATATTGTAGTCGGATAGAGTGCGCTCG 46438 |||| ||| || |||| || |||||||| ||||| ||||||||| || ||||| | Sbjct 625484 CGCAGCACGAGGTGCAGGGTGCTCTCCTTCTGGATGTTGTAGTCGCTCAGGGTGCGGCCA 625543 Query 46439 TCGTCGAGCTGCTTGCCGGCGAATATCAAGCGCTGCTGGTCGGCCGGCACGCTCTCCTTG 46498 || |||||||||||||||||||| || | |||||| ||||||| || | || ||||||| Sbjct 625544 TCCTCGAGCTGCTTGCCGGCGAAGATGAGGCGCTGTTGGTCGGGGGGGATGCCCTCCTTG 625603 Query 46499 TCCATGATCTTCTTCTTGAGCGTCG-CCACCGTGTCGCTCGATTCCACATCCACCGTGAT 46557 ||| |||||| ||||| ||| | | | |||||| || ||||| || | ||||| Sbjct 625604 TCCTGGATCTTGGACTTGA-CGTTGTCGATGGTGTCGGAAGACTCCACCTCAAGGGTGAT 625662 Query 46558 GGTTTTGCCCGTCAGCGTTTTAACAAAGATTTGCATTTTGC 46598 || || ||||| || || || || || || ||||| |||| Sbjct 625663 CGTCTTCCCCGTGAGGGTCTTGACGAAAATCTGCATCTTGC 625703 Score = 132 bits (146), Expect = 5e-26 Identities = 130/168 (77%), Gaps = 0/168 (0%) Strand=Plus/Plus Query 46402 CTCCTTTTGGATATTGTAGTCGGATAGAGTGCGCTCGTCGTCGAGCTGCTTGCCGGCGAA 46461 |||||| ||||| ||||| ||||| | || || | || |||||||||||||||||||| Sbjct 4593423 CTCCTTCTGGATGTTGTAATCGGACAAGGTCCGGCCATCCTCGAGCTGCTTGCCGGCGAA 4593482 Query 46462 TATCAAGCGCTGCTGGTCGGCCGGCACGCTCTCCTTGTCCATGATCTTCTTCTTGAGCGT 46521 |||| |||||||||||||| || | || |||||||||| ||||||| ||||| | Sbjct 4593483 AATCAGGCGCTGCTGGTCGGGAGGGATGCCCTCCTTGTCCTGGATCTTCGACTTGACATT 4593542 Query 46522 CGCCACCGTGTCGCTCGATTCCACATCCACCGTGATGGTTTTGCCCGT 46569 | | |||||| ||| || || || | ||||||||| |||||||| Sbjct 4593543 GTCGATCGTGTCCGACGACTCGACCTCAAGCGTGATGGTCTTGCCCGT 4593590 Score = 118 bits (130), Expect = 1e-21 Identities = 134/180 (74%), Gaps = 0/180 (0%) Strand=Plus/Plus Query 46402 CTCCTTTTGGATATTGTAGTCGGATAGAGTGCGCTCGTCGTCGAGCTGCTTGCCGGCGAA 46461 |||||| ||||| ||||||||| || || || |||| ||||||||||||||||| || Sbjct 4593131 CTCCTTCTGGATGTTGTAGTCGCTCAGGGTCCGGCCGTCCTCGAGCTGCTTGCCGGCAAA 4593190 Query 46462 TATCAAGCGCTGCTGGTCGGCCGGCACGCTCTCCTTGTCCATGATCTTCTTCTTGAGCGT 46521 || | ||| |||||||| | ||| | || |||||||||| ||||||| ||||| | Sbjct 4593191 GATGAGGCGTTGCTGGTCAGGCGGGATGCCCTCCTTGTCCTGGATCTTCGACTTGACATT 4593250 Query 46522 CGCCACCGTGTCGCTCGATTCCACATCCACCGTGATGGTTTTGCCCGTCAGCGTTTTAAC 46581 | | ||||| || ||||| || | |||||||| |||||||| || || || || Sbjct 4593251 GTCGATTGTGTCCGAAGACTCCACCTCGAGGGTGATGGTCTTGCCCGTGAGTGTCTTGAC 4593310 >seq1 Length=12542233 Score = 84.2 bits (92), Expect = 2e-11 Identities = 127/181 (70%), Gaps = 0/181 (0%) Strand=Plus/Plus Query 46404 CCTTTTGGATATTGTAGTCGGATAGAGTGCGCTCGTCGTCGAGCTGCTTGCCGGCGAATA 46463 |||| ||||| |||||||| || | ||| || | || ||||||||||| || || || | Sbjct 3488288 CCTTCTGGATGTTGTAGTCCGACAAAGTCCGTCCATCTTCGAGCTGCTTACCAGCAAAGA 3488347 Query 46464 TCAAGCGCTGCTGGTCGGCCGGCACGCTCTCCTTGTCCATGATCTTCTTCTTGAGCGTCG 46523 |||| | ||||| || | || | || |||||||||| |||||| ||||| | Sbjct 3488348 TCAATCTTTGCTGATCCGGGGGAATGCCCTCCTTGTCCTGGATCTTGGACTTGACATTGT 3488407 Query 46524 CCACCGTGTCGCTCGATTCCACATCCACCGTGATGGTTTTGCCCGTCAGCGTTTTAACAA 46583 | | ||||| || || || || | ||| || || |||||||| || || || || | Sbjct 3488408 CGATAGTGTCAGAAGACTCGACTTCAAGCGTAATCGTCTTGCCCGTTAGGGTCTTCACGA 3488467 Query 46584 A 46584 | Sbjct 3488468 A 3488468 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 565238202166560