Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Drechmeria_20coniospora_20[genbank_20GCA_5F001625195.1_202016-04-24]
28 sequences; 32,831,003 total letters
Query= NC_013772.1
Length=176677
Score E
Sequences producing significant alignments: (Bits) Value
seq3 161 1e-34
seq1 84.2 2e-11
>seq3
Length=9751215
Score = 161 bits (178), Expect = 1e-34
Identities = 167/216 (77%), Gaps = 2/216 (1%)
Strand=Plus/Plus
Query 46379 CGCAACACCAGATGCAATGTACTCTCCTTTTGGATATTGTAGTCGGATAGAGTGCGCTCG 46438
|||| || ||||| | || |||||||| ||||| ||||||||| | || || ||
Sbjct 4592880 CGCAGTACAAGATGTAGAGTGCTCTCCTTCTGGATGTTGTAGTCGCTCAAGGTACGGCCG 4592939
Query 46439 TCGTCGAGCTGCTTGCCGGCGAATATCAAGCGCTGCTGGTCGGCCGGCACGCTCTCCTTG 46498
|| |||||||||||||||||||| |||| |||||||||||||| ||| | || |||||||
Sbjct 4592940 TCCTCGAGCTGCTTGCCGGCGAAAATCAGGCGCTGCTGGTCGGGCGGGATGCCCTCCTTG 4592999
Query 46499 TCCATGATCTTCTTCTTGAGCGTCG-CCACCGTGTCGCTCGATTCCACATCCACCGTGAT 46557
||| ||||| |||| | ||| | | | ||||| ||||||||| |||| ||||||
Sbjct 4593000 TCCTGAATCTTGCTCTTTA-CGTTGTCGATTGTGTCCGACGATTCCACCTCCAACGTGAT 4593058
Query 46558 GGTTTTGCCCGTCAGCGTTTTAACAAAGATTTGCAT 46593
|| ||||| |||| ||| || || ||||| |||||
Sbjct 4593059 CGTCTTGCCGGTCAACGTCTTGACGAAGATCTGCAT 4593094
Score = 143 bits (158), Expect = 3e-29
Identities = 166/221 (75%), Gaps = 2/221 (1%)
Strand=Plus/Plus
Query 46379 CGCAACACCAGATGCAATGTACTCTCCTTTTGGATATTGTAGTCGGATAGAGTGCGCTCG 46438
|||| ||| || |||| || |||||||| ||||| ||||||||| || ||||| |
Sbjct 625484 CGCAGCACGAGGTGCAGGGTGCTCTCCTTCTGGATGTTGTAGTCGCTCAGGGTGCGGCCA 625543
Query 46439 TCGTCGAGCTGCTTGCCGGCGAATATCAAGCGCTGCTGGTCGGCCGGCACGCTCTCCTTG 46498
|| |||||||||||||||||||| || | |||||| ||||||| || | || |||||||
Sbjct 625544 TCCTCGAGCTGCTTGCCGGCGAAGATGAGGCGCTGTTGGTCGGGGGGGATGCCCTCCTTG 625603
Query 46499 TCCATGATCTTCTTCTTGAGCGTCG-CCACCGTGTCGCTCGATTCCACATCCACCGTGAT 46557
||| |||||| ||||| ||| | | | |||||| || ||||| || | |||||
Sbjct 625604 TCCTGGATCTTGGACTTGA-CGTTGTCGATGGTGTCGGAAGACTCCACCTCAAGGGTGAT 625662
Query 46558 GGTTTTGCCCGTCAGCGTTTTAACAAAGATTTGCATTTTGC 46598
|| || ||||| || || || || || || ||||| ||||
Sbjct 625663 CGTCTTCCCCGTGAGGGTCTTGACGAAAATCTGCATCTTGC 625703
Score = 132 bits (146), Expect = 5e-26
Identities = 130/168 (77%), Gaps = 0/168 (0%)
Strand=Plus/Plus
Query 46402 CTCCTTTTGGATATTGTAGTCGGATAGAGTGCGCTCGTCGTCGAGCTGCTTGCCGGCGAA 46461
|||||| ||||| ||||| ||||| | || || | || ||||||||||||||||||||
Sbjct 4593423 CTCCTTCTGGATGTTGTAATCGGACAAGGTCCGGCCATCCTCGAGCTGCTTGCCGGCGAA 4593482
Query 46462 TATCAAGCGCTGCTGGTCGGCCGGCACGCTCTCCTTGTCCATGATCTTCTTCTTGAGCGT 46521
|||| |||||||||||||| || | || |||||||||| ||||||| ||||| |
Sbjct 4593483 AATCAGGCGCTGCTGGTCGGGAGGGATGCCCTCCTTGTCCTGGATCTTCGACTTGACATT 4593542
Query 46522 CGCCACCGTGTCGCTCGATTCCACATCCACCGTGATGGTTTTGCCCGT 46569
| | |||||| ||| || || || | ||||||||| ||||||||
Sbjct 4593543 GTCGATCGTGTCCGACGACTCGACCTCAAGCGTGATGGTCTTGCCCGT 4593590
Score = 118 bits (130), Expect = 1e-21
Identities = 134/180 (74%), Gaps = 0/180 (0%)
Strand=Plus/Plus
Query 46402 CTCCTTTTGGATATTGTAGTCGGATAGAGTGCGCTCGTCGTCGAGCTGCTTGCCGGCGAA 46461
|||||| ||||| ||||||||| || || || |||| ||||||||||||||||| ||
Sbjct 4593131 CTCCTTCTGGATGTTGTAGTCGCTCAGGGTCCGGCCGTCCTCGAGCTGCTTGCCGGCAAA 4593190
Query 46462 TATCAAGCGCTGCTGGTCGGCCGGCACGCTCTCCTTGTCCATGATCTTCTTCTTGAGCGT 46521
|| | ||| |||||||| | ||| | || |||||||||| ||||||| ||||| |
Sbjct 4593191 GATGAGGCGTTGCTGGTCAGGCGGGATGCCCTCCTTGTCCTGGATCTTCGACTTGACATT 4593250
Query 46522 CGCCACCGTGTCGCTCGATTCCACATCCACCGTGATGGTTTTGCCCGTCAGCGTTTTAAC 46581
| | ||||| || ||||| || | |||||||| |||||||| || || || ||
Sbjct 4593251 GTCGATTGTGTCCGAAGACTCCACCTCGAGGGTGATGGTCTTGCCCGTGAGTGTCTTGAC 4593310
>seq1
Length=12542233
Score = 84.2 bits (92), Expect = 2e-11
Identities = 127/181 (70%), Gaps = 0/181 (0%)
Strand=Plus/Plus
Query 46404 CCTTTTGGATATTGTAGTCGGATAGAGTGCGCTCGTCGTCGAGCTGCTTGCCGGCGAATA 46463
|||| ||||| |||||||| || | ||| || | || ||||||||||| || || || |
Sbjct 3488288 CCTTCTGGATGTTGTAGTCCGACAAAGTCCGTCCATCTTCGAGCTGCTTACCAGCAAAGA 3488347
Query 46464 TCAAGCGCTGCTGGTCGGCCGGCACGCTCTCCTTGTCCATGATCTTCTTCTTGAGCGTCG 46523
|||| | ||||| || | || | || |||||||||| |||||| ||||| |
Sbjct 3488348 TCAATCTTTGCTGATCCGGGGGAATGCCCTCCTTGTCCTGGATCTTGGACTTGACATTGT 3488407
Query 46524 CCACCGTGTCGCTCGATTCCACATCCACCGTGATGGTTTTGCCCGTCAGCGTTTTAACAA 46583
| | ||||| || || || || | ||| || || |||||||| || || || || |
Sbjct 3488408 CGATAGTGTCAGAAGACTCGACTTCAAGCGTAATCGTCTTGCCCGTTAGGGTCTTCACGA 3488467
Query 46584 A 46584
|
Sbjct 3488468 A 3488468
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 565238202166560
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |