Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Drechmeria_20coniospora_20[genbank_20GCA_5F001625195.1_202016-04-24] 28 sequences; 32,831,003 total letters Query= NC_013953.1 Length=156344 Score E Sequences producing significant alignments: (Bits) Value seq3 161 1e-34 >seq3 Length=9751215 Score = 161 bits (178), Expect = 1e-34 Identities = 347/507 (68%), Gaps = 20/507 (4%) Strand=Plus/Plus Query 132604 TTTTGATATTCGCCCACCTTTTTCTCaaaaaaaTTAGTTTTTCCCTCCAAGGAAATGAGC 132663 |||||||| ||| | || |||||| || ||||| || || || | | ||| ||| | Sbjct 2598596 TTTTGATAGTCGGCAACACGTTTCTCGAAGAAATTGGTCTTGCCACCGAGGGAGATGTTC 2598655 Query 132664 GTCATAAAATCCAAGGGGTTGGCTGTGTTGTAGTGCTT---GGTGCCGATCAGGTCGACG 132720 ||| || || |||||||| | | ||||| ||| | |||||| || | || Sbjct 2598656 TCCATGAAGTCGAAGGGGTTCGACGATTTGTACACCTTCTCGTTGCCGAG-AG--CAACA 2598712 Query 132721 AGCAGCCTGTCGGCCACGAACTCGATGTATTGCGACAT---GGTTTCGCAATTAAGTCCC 132777 || || | ||||| |||||||||||||| ||| ||| ||| | ||| | || Sbjct 2598713 AGGAGACGATCGGCAACGAACTCGATGTACTGCTTCATCAAGGT---GGCATTCATGCCG 2598769 Query 132778 AGCAGACGCAC-CGGCAGCGCTTCGGTGAGAAAGCGTTGCTCGATGGCGACCGCGTCGGT 132836 |||||| |||| || || || |||||||| || ||||| |||| ||| |||||||| Sbjct 2598770 AGCAGA-GCACATGGGAGGGCCTCGGTGAGGAACTCCTGCTCAATGGTGACGGCGTCGGT 2598828 Query 132837 GACGATTTCCCTAACGCGCGCCGCGCTCGGCCGTTGCACCAAATGCTTGAA--CATCAAG 132894 || ||| || | | | | | ||| | ||| | | ||| ||| || || | Sbjct 2598829 GATGATGTCGTTGATGACCTTCTTGCTGGCCCGGTTGTTGAGGTGC--GAATGCAACAGG 2598886 Query 132895 CAAGCAAAGTCGCAATGCAAGCCCTCGTCCCTGGAAATGAGTTCGTTGCTGAAAGTCAAG 132954 || ||||| ||| || | ||||| || | || ||||| |||||| ||| |||| Sbjct 2598887 CACGCAAAATCGGTGTGAAGACCCTCATCACGCGAGATGAGCTCGTTGGAGAATGTCAGA 2598946 Query 132955 CCGGGCATGAGGCCGCGTTTTTTGAGCCAAAATATGGCGGCGAAACTGCCCGAAAAGAAG 133014 || |||||||| ||||| || || ||||| || || | ||||||| || |||||| Sbjct 2598947 CCAGGCATGAGACCGCGCTTCTTCAGCCAGAAGATTGAGGCGAAAGCACCGCTGAAGAAG 2599006 Query 133015 ACGCCCTCGACGGCCGCGAAAGCCACCAGGCGCTCGCCGAACGTGG-CTTCTTTGCTGGC 133073 | ||| |||||||| || || || || || | | | ||||||||| || ||| || | Sbjct 2599007 ATGCCTTCGACGGCGGCAAAGGCAACAAGTCTTTGGGCGAACGTGGACTCCTTGTCTTG- 2599065 Query 133074 GATCCAGCGCAGCGCCCATTCGGCCTT 133100 |||||| ||||| ||||| || ||||| Sbjct 2599066 GATCCAACGCAGGGCCCAATCAGCCTT 2599092 Score = 145 bits (160), Expect = 8e-30 Identities = 198/276 (72%), Gaps = 3/276 (1%) Strand=Plus/Plus Query 133167 GTAGGTGTCGATGAGGGTCGAATACATTTCCGAGTGTACGTTCTCCATGGCGATTTGAAA 133226 ||| | |||||| | | ||| || | || ||||| | || ||||| |||||| || Sbjct 2599230 GTACGAGTCGATCAAGAGCGAGTAGGTCTCGGAGTGGATATTTTCCATCATGATTTGGAA 2599289 Query 133227 GCCGTAAAAGCACCGCGCCTCGACCACCTGCACTTCTTGAGCGAAACGCTCGACCAGATT 133286 ||||| ||||| || |||||| | ||||| || |||||| ||||| || || Sbjct 2599290 ACCGTAGAAGCAGCGAGCCTCGGGGATTTGCACCTCGCCGCTGAAACGTTCGACAAGGTT 2599349 Query 133287 TTCGTTGACGATGCCGTCGCTGGCGGCGAAAAAGGCCAGCACGTGCTTGATGAAATGGCG 133346 ||||||||||| ||||| |||||||| || || || | |||| || ||||| || Sbjct 2599350 CTCGTTGACGATTCCGTCCGAAGCGGCGAAGAAAGCGAGAATGTGCGAGACGAAATACCG 2599409 Query 133347 CTCGTTGTCGTTCAAGCG---CTCCCAGTCGCGCGTGTCCTTGGACAGGTCCACCTCCTC 133403 ||| | ||| ||||| || | ||||||| || |||||||| || || | ||| || Sbjct 2599410 CTCATCGTCATTCAAACGGTTGTTCCAGTCGTGCAAATCCTTGGAAAGATCGATCTCTTC 2599469 Query 133404 GACGGTCCAAAACGACGCCTCGGCTTTTTTGTACAT 133439 | | ||||| || ||||||||||| || |||||||| Sbjct 2599470 GGCCGTCCAGAAGGACGCCTCGGCCTTCTTGTACAT 2599505 Score = 143 bits (158), Expect = 3e-29 Identities = 167/220 (76%), Gaps = 4/220 (2%) Strand=Plus/Minus Query 38241 AAAATGCAAATATTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAGGCC 38300 || ||||| || ||||| || || |||||||| || || |||||| | || || ||| | Sbjct 625701 AAGATGCAGATTTTCGTCAAGACCCTCACGGGGAAGACGATCACCCTTGAGGTGGAGTCT 625642 Query 38301 ACCGACAGCGTGCA-AACGCTTAAAGAAAAAATCCTCGACAAAGAGGGAATTCCCGCCGA 38359 |||||| | | | |||| | || || |||| ||||| ||||| || ||| |||| Sbjct 625641 TCCGACACCATCGACAACG-TCAAGTCCAAGATCCAGGACAAGGAGGGCATCCCCCCCGA 625583 Query 38360 CCAACAGCGGCTCATTTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTA 38419 ||||||||| ||||| | ||| ||||| ||||| || || | |||||||| | |||||| Sbjct 625582 CCAACAGCGCCTCATCTTCGCCGGCAAGCAGCTCGAGGATGGCCGCACCCTGAGCGACTA 625523 Query 38420 CAACATCCAAAAGGA-AGCGACGCTGCATTTGGTGCTGCG 38458 ||||||||| ||||| ||| || ||||| | |||||||| Sbjct 625522 CAACATCCAGAAGGAGAGC-ACCCTGCACCTCGTGCTGCG 625484 Score = 114 bits (126), Expect = 1e-20 Identities = 153/210 (73%), Gaps = 2/210 (1%) Strand=Plus/Minus Query 38251 TATTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAGGCCACCGACAGCG 38310 || |||| || || ||||||||||| ||||||||| |||| || ||| | | |||| Sbjct 4593315 TAGTCGTCAAGACACTCACGGGCAAGACCATCACCCTCGAGGTGGAGTCTTCGGACACAA 4593256 Query 38311 TGCAAACGCTTAAAGAAAAAATCCTCGACAAAGAGGGAATTCCCGCC-GACCAACAGCGG 38369 | | | | || || |||| ||||| ||||| || |||||| ||||| || || Sbjct 4593255 TCGACAATGTCAAGTCGAAGATCCAGGACAAGGAGGGCAT-CCCGCCTGACCAGCAACGC 4593197 Query 38370 CTCATTTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTACAACATCCAA 38429 ||||| | || ||||| ||||| || |||| || ||||| | ||||||||||||||| Sbjct 4593196 CTCATCTTTGCCGGCAAGCAGCTCGAGGACGGCCGGACCCTGAGCGACTACAACATCCAG 4593137 Query 38430 AAGGAAGCGACGCTGCATTTGGTGCTGCGT 38459 ||||| ||||||| || | || || ||| Sbjct 4593136 AAGGAGTCGACGCTCCACCTCGTCCTCCGT 4593107 Score = 113 bits (124), Expect = 5e-20 Identities = 168/232 (72%), Gaps = 6/232 (3%) Strand=Plus/Minus Query 38244 ATGCAAATATTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAGGCCACC 38303 ||||| || ||||| || ||| | || ||||| || ||||| | || || || | | Sbjct 4593094 ATGCAGATCTTCGTCAAGACGTTGACCGGCAAGACGATCACGTTGGAGGTGGAATCGTCG 4593035 Query 38304 GACAGCGTGCA-AACGCTTAAAGAAAAA-ATCCTCGACAAAGAGGGAATTCCCGCCGACC 38361 |||| | | |||| |||||| || || | ||||| ||||| || || |||||| Sbjct 4593034 GACACAATCGACAACG--TAAAGAGCAAGATTCAGGACAAGGAGGGCATCCCGCCCGACC 4592977 Query 38362 AACAGCGGCTCATTTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTACA 38421 | ||||| || |||| ||| ||||| ||||| || |||| || ||| | | |||||||| Sbjct 4592976 AGCAGCGCCTGATTTTCGCCGGCAAGCAGCTCGAGGACGGCCGTACCTTGAGCGACTACA 4592917 Query 38422 ACATCCAAAAGGA-AGCGACGCTGCATTTGGTGCTGCGTTTGAGAGGCGGCC 38472 ||||||| ||||| ||| || || ||| | || ||||| || | ||||||| Sbjct 4592916 ACATCCAGAAGGAGAGC-ACTCTACATCTTGTACTGCGCCTGCGCGGCGGCC 4592866 Score = 93.3 bits (102), Expect = 4e-14 Identities = 129/181 (71%), Gaps = 0/181 (0%) Strand=Plus/Minus Query 38266 TCACGGGCAAAACCATCACCGTCGACGTCGAGGCCACCGACAGCGTGCAAACGCTTAAAG 38325 |||||||||| |||||||| | || |||||| | | |||| | | | | || Sbjct 4593592 TCACGGGCAAGACCATCACGCTTGAGGTCGAGTCGTCGGACACGATCGACAATGTCAAGT 4593533 Query 38326 AAAAAATCCTCGACAAAGAGGGAATTCCCGCCGACCAACAGCGGCTCATTTACGCGGGCA 38385 || |||| ||||| ||||| || || ||||||| ||||| || |||| ||| |||| Sbjct 4593532 CGAAGATCCAGGACAAGGAGGGCATCCCTCCCGACCAGCAGCGCCTGATTTTCGCCGGCA 4593473 Query 38386 AACAGCTGGACGACGAGCGCACCCTCAACGACTACAACATCCAAAAGGAAGCGACGCTGC 38445 | ||||| || || | || ||| | ||| ||||||||||| ||||| ||||||| | Sbjct 4593472 AGCAGCTCGAGGATGGCCGGACCTTGTCCGATTACAACATCCAGAAGGAGTCGACGCTCC 4593413 Query 38446 A 38446 | Sbjct 4593412 A 4593412 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 500172624939520