Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Drechmeria_20coniospora_20[genbank_20GCA_5F001625195.1_202016-04-24] 28 sequences; 32,831,003 total letters Query= NC_019495.1 Length=290304 Score E Sequences producing significant alignments: (Bits) Value seq3 407 3e-108 >seq3 Length=9751215 Score = 407 bits (450), Expect = 3e-108 Identities = 974/1451 (67%), Gaps = 43/1451 (3%) Strand=Plus/Minus Query 221411 GACTGCGTCAGGGCAGCGTGGTAGATGGTCTCAAAGATCATCTTGTTGAGTCTCTTG-GC 221469 |||| ||||||||| ||||||||||||||||| |||||| |||||| || ||| | || Sbjct 5390132 GACTCCGTCAGGGCCGCGTGGTAGATGGTCTCGAAGATCTGCTTGTTCAG-CTCGCGCGC 5390074 Query 221470 CTCGGGAGAAGTGAAGGGCATACGCAGCATCTGAAAGACGTCGGCCAGTCCCTGTACTCC 221529 |||||| || ||||||||| |||||| | ||| ||||||| || ||||| || || Sbjct 5390073 CTCGGGGGACTCGAAGGGCATGCGCAGCGCGAGGAAGGCGTCGGCGAGGCCCTGGACGCC 5390014 Query 221530 GATACCGATGGGCCTGTGTCTCCTGTTG--GAAGCGGCCGCTTCTGGCACGGGATAAAAG 221587 || |||||||| | ||| | |||| | ||| | || |||| ||||| || | Sbjct 5390013 GACGCCGATGGGTCGGTGGCGGAAGTTGCTGTTGCGCGC-CTCCTGG-ACGGGGTAGTGG 5389956 Query 221588 TTGACGTCGATCAGATTGTTGAGGTTCAGAGTGATGACTTTAACCACCTCGGTCAGCTTC 221647 ||||||||||| | ||||||||| | || ||| ||||||| ||||||| Sbjct 5389955 TTGACGTCGATGATGCGGTTGAGGTTGCGGACGACGACGCGCGTCACCTCGTGCAGCTTC 5389896 Query 221648 TGGTGATTGAACACCAACTCGCCGCCGTCGTGGAGGGGTTCCACAAAAGCGTTTAGGGCA 221707 | |||| | | || ||| |||| | | || ||||| || ||||| Sbjct 5389895 T------TGAAGTCGTA---GCAGCCCTCGTTGTAG---TCGACAAAGGCCGGCAGGGCG 5389848 Query 221708 ACGCTGGCCAGGTTACACACGGCCACCTCGTCCTTGTTGGTATACTGTATGATCTCTGTA 221767 | || ||||| || |||||||||||||| | |||| |||||||| || Sbjct 5389847 AGCGACGCGAGGTTGCAGACGGCCACCTCGTCGGGCGCCGAGTACTCGATGATCTCGGTG 5389788 Query 221768 CAGAGGTTGCTGCACTTGATGGTCCCCAGGTGATTGTGATTAGACTTGCGATTGGCAGCG 221827 || |||||| || ||| ||||| |||| || || || |||||| ||| ||| Sbjct 5389787 CACAGGTTGGAGCTGCGGATCGTCCCGAGGTTCTTCTGGTTGCTCTTGCGGTTGCACGCG 5389728 Query 221828 TCCTTGTAGAGCATAAAGGGACCGCCAGTCTCCAGCTGAGCCACCAGAATCTTGTCCCAG 221887 |||||||| ||||| ||||| ||| |||||| ||| ||| | || ||| || |||| Sbjct 5389727 TCCTTGTACAGCATGAAGGGGTTGCCCGTCTCCGTCTGGGCCTCGAGGATCGAGTACCAG 5389668 Query 221888 AGTTCTCTGG-CGCTCACCGTCCTCTTGACTGCACCCTCGGTCTTTTCATACCCGGTATA 221946 || | ||||| ||| |||||| | | | |||||| || | | || || Sbjct 5389667 AGCT-TCTGGGCGCGGACCGTCTTGCGGCCGCGGCCCTCGCGCTCGTACTTTTCG---TA 5389612 Query 221947 GAGCATGTCAAACTTTTCACCGTACGCCTCGTCCAGGCCTGGACACCTGGCGGGACACAT 222006 ||| || |||| || ||||| ||| | ||||| || ||| | ||| ||||| Sbjct 5389611 CAGCGCCTCGAACTCGTCGCCGTAGCAGTCGGCGAGGCCGGGGCACTCGTTGGGGCACAT 5389552 Query 222007 CAGACTCCAGTGCTTGTTGTCTTTGACCCTCTGCATGAAGAGGTCCGGGATCCACAGCGC 222066 || |||||| ||| | | ||| | || |||||||||||| |||||||| ||||| Sbjct 5389551 GAGCGTCCAGTCGCCGTTCTTCTCGACGCGCTTCATGAAGAGGTCGGGGATCCAGAGCGC 5389492 Query 222067 CTGAAAGAGATCTCTGGTCCGCTGCTCCTCCACGCCGTTGTTTTTCCTCAGATCCAAAAA 222126 | || || || | | ||| ||||||| ||||| ||| || | ||| || | ||| Sbjct 5389491 GAGGAACAGGTCGCGCGCGCGCACCTCCTCCTTGCCGTGGTTCTTGCGCAGGTCGAGAAA 5389432 Query 222127 CTCAAAAATGTCAGCGTGCCACGGCTCCAGATAGACGGCCAGAGCGCCGGGTCGCTTGTT 222186 |||||||| ||| ||||||||||| ||||| |||| ||| | ||||| || |||||||| Sbjct 5389431 CTCAAAAACGTCGGCGTGCCACGGTTCCAGGTAGATGGCGAAGGCGCCCGGCCGCTTGTT 5389372 Query 222187 GCCACCCTGATCCACCATCCTCTCCAGAGCGTTGAAGATGCGAAGGGTCGGTACCAGTCC 222246 ||| ||||| || || || || |||||||| |||||| | || | || Sbjct 5389371 GCCGCCCTGGTCGACGTACCGGGCCGTGTTGTTGAAGACGCGAAGCATGGGCGTGATGCC 5389312 Query 222247 GTTGGATCGACCGTTGGTGCCCTTAATGTACGCACCGCCGGCCCTCAGGTTAC--TGGCA 222304 |||||| |||||||||||| |||||| | ||| ||| | || | | ||| Sbjct 5389311 GTTGGAGGTACCGTTGGTGCCGGCAATGTAGGATCCGGTGGCGC---GGATGCGGTGGAT 5389255 Query 222305 G-ACATGCCGATACCACCGGCGTGTTTCGAGATCATGGCGCAGCTCTTGAGAGTGTCCAT 222363 | | |||||| || ||||| || |||||||||||||| ||||||| ||||| Sbjct 5389254 GTTGAGGCCGATGCCGCCGGCCATCTTGGAGATCATGGCGCACGTCTTGAGCGTGTCGTA 5389195 Query 222364 GATGCCCTCCATAGAGTCCTCCTTGACGTTCAGCAGAAAACAAGACGACATCTGAGATTT 222423 ||||||||| || ||| ||||| | || | || || || ||||||| ||| | | Sbjct 5389194 GATGCCCTCGATGCTGTCGTCCTTCATGTCGACGAGGAAGCACGACGACAGCTGCGCCTG 5389135 Query 222424 GGTGGAACAGGCGTTAAACAGCGTGGGACTGGCGTGTGTAAAGTAGCCCCTAGACATCAG 222483 | | | |||||| || ||||| || |||||| || || || ||||| || Sbjct 5389134 CGGCGTGCCGGCGTTGAAGAGCGTCGGCGAGGCGTGCGTGAACATCTTGCTCGACATGAG 5389075 Query 222484 ATCGTACGTCTCTACGACTCTGGCGATGTTGTC-CCCGTGAATCTGCATGGCGCATCTCA 222542 || ||||||||| | ||| | |||||||||| ||| || | | | | | | || Sbjct 5389074 ATTGTACGTCTCGATGACGCGCTCGATGTTGTCGCCCCAGATGCCGACCGACAC-GCGCA 5389016 Query 222543 TGTACATGTACTGGGGCCTCTCCACAGGAC---CCTTGGAGCTGGAGAGCAGGTACGATT 222599 || ||||| ||| || | ||| || | | || | ||||| ||| ||||| ||| Sbjct 5389015 TGATCATGTGCTGCGGTCGCTCGAC-GATCTTGCCGTTGAGCT--TGAGGAGGTAGGATC 5388959 Query 222600 TTTCCAGAGTCTTGAACCCAAAGTAGTTGAGGTCAAAGTCTCTGCCGTGAACCACGGCGG 222659 || ||||||||||| |||||||| | | || ||||| | | ||| || | ||| | Sbjct 5388958 GCTCGAGAGTCTTGAAGCCAAAGTACTGGTAGTTGAAGTCGCGGTCGTAGACGATGGCCG 5388899 Query 222660 CGTCCAGCTCCGACTTGTGCTTTACGCTCAACTCGAAAAAGCGCTCAGACACGAGGGGAG 222719 ||| |||||| ||||||| | | | ||||| | || || | | ||| | Sbjct 5388898 AGTCGAGCTCCTCCTTGTGCCTCATGACGCACTCGTACGTCTCCTGCGAGATCATGGGCG 5388839 Query 222720 CGTTCTCTTTGGTGTCGGGGTTAACGTTGTGGTACAGCTGCCACATGGCATCAGAGAAC- 222778 || | | | | |||||| |||| ||| ||||| | | || | | ||| || Sbjct 5388838 ACGCCTTGTCGTTTTTGGGGTTGACGTAGTGATACAGGTCGC---TGACGACCGAGGACC 5388782 Query 222779 -GTG-TCGGGAGTCTGCTTGTGCAGATTCGACACGGCGATCCGAGACGCCAAGATACCAT 222836 || | ||||||||||| || ||||| |||||||| |||| ||| | ||| | | Sbjct 5388781 ACTGCTTCTTCGTCTGCTTGTGAAGGTTCGAGACGGCGATGCGAGCCGCGAGGATGGCGT 5388722 Query 222837 AGTCAGGGTGC 222847 ||||||| ||| Sbjct 5388721 AGTCAGGATGC 5388711 Score = 114 bits (126), Expect = 2e-20 Identities = 137/186 (74%), Gaps = 0/186 (0%) Strand=Plus/Minus Query 221065 CATCTCGTCCGTCCATAGACCCCTCTCTTCCAGCACCTTGACCATGTGCTTGTTCACCAC 221124 |||| |||| | ||| || ||| | || | || |||||| || ||| ||||| Sbjct 5390469 CATCGCGTCGGACCAGAGTCCCATGTCGACGAGGTCCTTGAGCAGCCAGGGGTTGACCAC 5390410 Query 221125 TTGGAAATCTCCCGAGAGCACCCTCCTCTGGTACAGGTTAGAAGTGAACGGTTCGATGCT 221184 || || || || | ||| || | | |||||| | ||| || ||| |||| |||| || Sbjct 5390409 CTGAAACTCGCCGGCGAGGACGCGGCGCTGGTAGATGTTGGACGTGTACGGCTCGAAGCA 5390350 Query 221185 CTCGTTGTTGCCCAGGATCTGAGCCGTGCTGGCGGTGGGCATGGGTGCCACCAGCAGACT 221244 ||||||||||||||||||||| | ||||||||| || ||||| || || | |||||| || Sbjct 5390349 CTCGTTGTTGCCCAGGATCTGCGACGTGCTGGCCGTCGGCATCGGCGCGAGCAGCAGGCT 5390290 Query 221245 GTTGCG 221250 |||||| Sbjct 5390289 GTTGCG 5390284 Score = 109 bits (120), Expect = 1e-18 Identities = 116/153 (76%), Gaps = 0/153 (0%) Strand=Plus/Minus Query 25882 CTGGTAGCCTTTGCTGCTGTGGAGGGCATCTTTTTCAGCGGTTCGTTTGCGGCCATCTTC 25941 || || |||||||| || || || |||||||| ||||||||| | || || | |||||| Sbjct 2599035 CTTGTTGCCTTTGCCGCCGTCGAAGGCATCTTCTTCAGCGGTGCTTTCGCCTCAATCTTC 2598976 Query 25942 TGGCTCAAGCAGAAGGGGACCATGCCCGGGCTGTACTTTTCCAACGAGCTCATCAGCAGG 26001 ||||| ||| || || |||||| || ||| || ||||||||||||||| | Sbjct 2598975 TGGCTGAAGAAGCGCGGTCTCATGCCTGGTCTGACATTCTCCAACGAGCTCATCTCGCGT 2598916 Query 26002 GACGAGGGTCTCCACAGAGATTTTGCCTGCCTG 26034 || |||||||| |||| |||||||| |||||| Sbjct 2598915 GATGAGGGTCTTCACACCGATTTTGCGTGCCTG 2598883 Score = 89.7 bits (98), Expect = 1e-12 Identities = 175/258 (68%), Gaps = 3/258 (1%) Strand=Plus/Minus Query 25477 ATATGGGAGATGTACAAGAAGGCTCAAAACTCAAACTGGACCGCCGAAGAGATTGATCTG 25536 || ||| | |||||||||||||| | || |||||| ||||||||||| ||||| Sbjct 2599514 ATCTGGCAAATGTACAAGAAGGCCGAGGCGTCCTTCTGGACGGCCGAAGAGATCGATCTT 2599455 Query 25537 GCCAAGGACATGGACGGCTGGTACGCTCTATCCAAAGAC---GAGCAGCATTTTCTCAAG 25593 ||||||| || ||| |||| || | | || ||| |||| | |||| || | Sbjct 2599454 TCCAAGGATTTGCACGACTGGAACAACCGTTTGAATGACGATGAGCGGTATTTCGTCTCG 2599395 Query 25594 TACGTGTTGGCATTCTTTGCAGCCTCTGATGGTATAGTGAACGAGAATCTGTGCGAGAGA 25653 || | | || ||||| || || || || || || || |||||||| || ||| | Sbjct 2599394 CACATTCTCGCTTTCTTCGCCGCTTCGGACGGAATCGTCAACGAGAACCTTGTCGAACGT 2599335 Query 25654 TTCACCAGGGAAGTGCAGTACGTGGAGGCCAAGTGTTTCTACGGTTTCCAGATGGCCATC 25713 |||| | | || ||||| | ||||| || |||||||||||||| || || Sbjct 2599334 TTCAGCGGCGAGGTGCAAATCCCCGAGGCTCGCTGCTTCTACGGTTTCCAAATCATGATG 2599275 Query 25714 GAAAATGTGCACTCTGAG 25731 |||||| | ||||| ||| Sbjct 2599274 GAAAATATCCACTCCGAG 2599257 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 928844474904320