Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Drechmeria_20coniospora_20[genbank_20GCA_5F001625195.1_202016-04-24] 28 sequences; 32,831,003 total letters Query= NC_020852.1 Length=186468 Score E Sequences producing significant alignments: (Bits) Value seq3 127 2e-24 >seq3 Length=9751215 Score = 127 bits (140), Expect = 2e-24 Identities = 550/864 (64%), Gaps = 17/864 (2%) Strand=Plus/Plus Query 75212 CCACAGTACATGTTCATGCGGGTCGCAATCGGCATCCACGGGGAAGACATTGATTCTGTC 75271 || ||| ||||| ||||||| || | |||||||| || || |||| || ||| Sbjct 5389000 CCGCAGCACATGATCATGCGCGTGTCGGTCGGCATCTGGGGCGACAACATCGAGCGCGTC 5389059 Query 75272 TTGGAGACATACGACAAGATGTCC--CAAGGTATGTTCATTCACGCAACACCAACCCTCT 75329 | ||||| ||| | ||||| |||| ||||||| ||||| | || || |||| Sbjct 5389060 ATCGAGACGTACAATCTCATGTCGAGCAAG--ATGTTCACGCACGCCTCGCCGACGCTCT 5389117 Query 75330 TCAATGCTGGTACACCAAGACCGCAGATGTCCAGTTGCTTCCTTATCGCCAACAAGGAGG 75389 |||| || || || || ||||| |||| |||||||| ||| || ||||| | Sbjct 5389118 TCAACGCCGGCACGCCGCAGGCGCAGCTGTCGTCGTGCTTCCTCGTCGACATGAAGGACG 5389177 Query 75390 ACTCAATCAACGGTATCTATGGAACTCTTACGGAGTGTGCGCAAATCTCAAAGTGGGCTG 75449 || ||| | || ||||| | || || | | ||| || ||||| ||| ||| | Sbjct 5389178 ACAGCATCGAGGGCATCTACGACACGCTCAAGACGTGCGCCATGATCTCCAAGATGGCCG 5389237 Query 75450 GGGGTATTGGGATGCACATCCATGATGTGAGAGCCAATAAATCTCGTATTCGGGGGACAA 75509 | || || || | ||||||| | | |||| ||| ||| || || | Sbjct 5389238 GCGGCATCGGCCTCAACATCCACCGCATCCGCGCCACCGGATCCTACATTGCCGGCACCA 5389297 Query 75510 ATGGTCAATCAGATGGTATTATTCCAATGCTTCGCGTATTTAACGCCACAGCGCGCTATG 75569 | ||| || | || || | || ||||||||||| || ||| ||| || || || | Sbjct 5389298 ACGGTACCTCCAACGGCATCACGCCCATGCTTCGCGTCTTCAACAACACGGCCCGGTACG 5389357 Query 75570 TAAATCAAGCGGGGCGTCG-CAAGGGGTC------CATCGCGGTCTACTTGGAACCATGG 75622 | | || ||||| | |||| || | | |||| ||||| ||||||| ||| Sbjct 5389358 TCGACCA----GGGCGGCAACAAGCGGCCGGGCGCCTTCGCCATCTACCTGGAACCGTGG 5389413 Query 75623 CATGCCGATATCATGGAGTTCCTTGAGTTACGACTCAACCAAGGTGACGAAGAGGCTCGG 75682 || ||||| | | ||||| || || | || ||||| || | || |||| || Sbjct 5389414 CACGCCGACGTTTTTGAGTTTCTCGACCTGCGCAAGAACCACGGCAAGGAGGAGGTGCGC 5389473 Query 75683 TGTAGAGATCTCTTTTCATCCCTGTGGATTCCAGACCTTTTCATGAAGCGGGTTGAGGAG 75742 | || || || | || ||||| || ||||| ||||||||||| || ||| || Sbjct 5389474 GCGCGCGACCTGTTCCTCGCGCTCTGGATCCCCGACCTCTTCATGAAGCGCGTCGAGAAG 5389533 Query 75743 GGTGGTCAATGGTCTCTTTTCTGTCCAGACAAGGCACCAGGTCTCTCCGACGCGGTGGGT 75802 || | ||| | || | || || || || || || ||| ||||| || Sbjct 5389534 AACGGCGACTGGACGCTCATGTGCCCCAACGAGTGCCCCGGCCTCGCCGACTGCTACGGC 5389593 Query 75803 GAGGAGTTTGAAGCCCTCTACACAAAGTATGAAGAGGAGGGTAGAGCCAATGCGACTGTA 75862 || ||||| || || || ||| |||||| || ||||| | | | ||| || Sbjct 5389594 GACGAGTTCGAGGCGCTGTACGAAAAGTACGAGCGCGAGGGCCGCGGCCGCAAGACGGTC 5389653 Query 75863 CCAGCCGCCGATGTT-TGGAAGGCTATTCTCAAATCACAGACGGAGACTGGAACACCATA 75921 | ||| | || | | ||| | | || ||| | | ||||||||||| || | || | Sbjct 5389654 CGCGCC-CAGAAGCTCTGGTACTCGATCCTCGAGGCCCAGACGGAGACGGGCAACCCCTT 5389712 Query 75922 TATGCTTTACAAGGATGCTTGTAACAAGAAGAGTAACCAAAAGAATTTGGGAACAATCAA 75981 ||||| |||||||| || || ||| ||||| ||||| ||||| | || || ||| Sbjct 5389713 CATGCTGTACAAGGACGCGTGCAACCGCAAGAGCAACCAGAAGAACCTCGGGACGATCCG 5389772 Query 75982 GAGCTCAAATCTTTGCACGGAAATTTTAGAGTACACAGATAAGGATGAGACGGCTGTTTG 76041 ||||| || || ||||| || || | |||||| | | || ||| ||| || || Sbjct 5389773 CAGCTCCAACCTGTGCACCGAGATCATCGAGTACTCGGCGCCCGACGAGGTGGCCGTCTG 5389832 Query 76042 CAATTTGGCATCAATCGCCCTTCC 76065 ||| | || || ||||||| || Sbjct 5389833 CAACCTCGCGTCGCTCGCCCTGCC 5389856 Score = 86.0 bits (94), Expect = 7e-12 Identities = 296/456 (65%), Gaps = 18/456 (4%) Strand=Plus/Minus Query 65071 TTCGCCGAGCGCCTTTTTGCGTTTGCGTGTGTGGAGGGTATCTTCTTCTCCGGGTCATTC 65130 |||||| | | ||| |||| ||||| || || || ||||||||| ||| | ||| Sbjct 2599047 TTCGCCCAAAGACTTGTTGCCTTTGCCGCCGTCGAAGGCATCTTCTTCAGCGGTGCTTTC 2598988 Query 65131 TGCGCTATTTATTGGTTGAAGAAGCGGGGTCTCATGCCAGGCCTATGCTTCTCAAATGAA 65190 | | || | ||| |||||||||| ||||||||||| || || ||||| || || Sbjct 2598987 GCCTCAATCTTCTGGCTGAAGAAGCGCGGTCTCATGCCTGGTCTGACATTCTCCAACGAG 2598928 Query 65191 CTTATTTCCCGAGATGAGGGTCTCCACCAGGAGTTTGCCGTGGAGCTCTTCAAGACTTTG 65250 || || || || ||||||||||| ||| || |||| |||| || || | | Sbjct 2598927 CTCATCTCGCGTGATGAGGGTCTTCACACCGATTTTG-CGTG--CCTGTTGCATTCGCAC 2598871 Query 65251 CGTAATAGACCCACTACC--GAAACT-ATCCACGCCATCGTGAAAGAGGCGGTTGAGATT 65307 | || | | | | | ||| | ||| ||| |||| | | || || || ||| Sbjct 2598870 CTCAACAACCGGGCCAGCAAGAAGGTCATCAACGACATCATCACCGACGCCGTCACCATT 2598811 Query 65308 GAGAAAGGGTTCATCTTGGACGCACTCCCATGTAATCTCATCGGTATGAACTCTGAGAAG 65367 ||| | | |||| || || || ||||||||| ||| |||| ||||| | | Sbjct 2598810 GAGCAGGAGTTCCTCACCGAGGCCCTCCCATGTGCTCTGCTCGGCATGAATGCCACCTTG 2598751 Query 65368 ATGTCCGAGTACATTGAGTATGTGTCGGATCGTCTCCTCAAACAAGTTGGGGT-GCCACC 65426 ||| ||||||| |||| || | ||||||||||| |||| | | || | Sbjct 2598750 ATGAAGCAGTACATCGAGTTCGTTGCCGATCGTCTCCT------TGTTGCTCTCGGCAAC 2598697 Query 65427 CA-----TTTGGAACGCGAAGAATCCATTTGACTTTATGGAAAACATTAGCCTTGATGGG 65481 | | | || || ||| || || ||||| ||||| ||||| ||| | ||| Sbjct 2598696 GAGAAGGTGTACAAATCGTCGAACCCCTTCGACTTCATGGAGAACATCTCCCTCGGTGGC 2598637 Query 65482 AAGACCAACTTCTTTGAGAAGCGAGTTGGGGACTAT 65517 |||||||| ||||| ||||| || |||| |||||| Sbjct 2598636 AAGACCAATTTCTTCGAGAAACGTGTTGCCGACTAT 2598601 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 596569391200640