Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Drechmeria_20coniospora_20[genbank_20GCA_5F001625195.1_202016-04-24] 28 sequences; 32,831,003 total letters Query= NC_020864.1 Length=205622 Score E Sequences producing significant alignments: (Bits) Value seq1 435 4e-117 seq3 145 1e-29 >seq1 Length=12542233 Score = 435 bits (482), Expect = 4e-117 Identities = 1012/1514 (67%), Gaps = 20/1514 (1%) Strand=Plus/Plus Query 195374 AATGACCAAGGAAACCGTACAACTCCATCGTACGTTGCCTTTACAGATAATGAACGTCTC 195433 || ||||| || ||||| || || || |||| ||||||||| || || | || || || Sbjct 9149271 AACGACCAGGGCAACCGAACGACGCCCTCGTTCGTTGCCTTCACTGACACGGAGCGCCTG 9149330 Query 195434 GTTGGAGATGCCGCAAAAAATCAGACAGCTATGAACCCTATCAATACTGTCTTTGACGCG 195493 |||| |||||||| || || ||| || ||||||||| ||| |||||||||||||| Sbjct 9149331 ATTGGTGATGCCGCCAAGAACCAGGTGGCCATGAACCCTCACAACACTGTCTTTGACGCC 9149390 Query 195494 AAGCGTCTTATTGGTCGCAAGTTTTCGGATAAGAAAGTCCAAGACGATATAAAGGACTGG 195553 ||||| | ||||| |||||||| ||| | ||||||| ||| || ||| ||| Sbjct 9149391 AAGCGATTGATTGGCCGCAAGTTCAGTGATGCCGAGGTCCAAGCCGACATGAAGCACTTC 9149450 Query 195554 TCTTATGAAGTTGTTC--CCGGTGTGGCTGATAAGCCTATGATTAATGTTGAATTTCACG 195611 | | | ||| | || | | ||||| ||||| || || | || || || | | Sbjct 9149451 CCCT-TCAAGATCATCGACAAGGGTGGC----AAGCCCATAATCGAGGTCGAGTTCAAGG 9149505 Query 195612 GTGAGAAGAAACAATTTGCTCCCGAAGAAATTTCGTCTATGGTGTTGATTAAGATGAAGG 195671 | ||| |||| || ||||||| || || || || ||||| | | |||||| | Sbjct 9149506 GCGAGCAGAAGACGTTCACTCCCGAGGAGATCTCCTCCATGGTCCTCACCAAGATGCGTG 9149565 Query 195672 AGACTGCGGA-ATCTTTCATGGGTAAAACTGTGAAAGATGCAGTTGTGACTGTACCTGCT 195730 ||||||| || | || | || | | |||| | || || || || || ||||| Sbjct 9149566 AGACTGCCGAGAGCTACCTCGGCTGCCA-AGTGACCAACGCTGTCGTCACCGTTCCTGCC 9149624 Query 195731 TACTTCAGTGATTCACAACGACAGGCGACAAAGGACGCTGCTGCTATTGCGGGTCTAAAC 195790 ||||||| || || || ||||| || |||||||| | | ||||| ||||| ||| Sbjct 9149625 TACTTCAACGACAGCCAGCGTCAGGCCACCAAGGACGCCGGTCTCATTGCCGGTCTCAAC 9149684 Query 195791 TGTCTTAGAATTATCAATGAACCAACAGCGGCTGCAATTGCTTATGGTCTGGACAAGAAC 195850 || |||| ||||| || || || || || || ||||| |||||||| |||||||| Sbjct 9149685 GTCCTCCGAATCATCAACGAGCCTACCGCTGCCGCCATTGCCTATGGTCTCGACAAGAAG 9149744 Query 195851 AAGGACGAAGATAAAAATGTATTGATCTTTGATCTCGGTGGTGGTACGTTTGATGTCTCA 195910 || | || || || | || || ||||||||||||||||| ||||||||||| Sbjct 9149745 GTCGAGGGCGAGCGCAACGTCCTCATTTTCGATCTCGGTGGTGGTACCTTTGATGTCTCT 9149804 Query 195911 CTTCTCAATATTGAAGGTGGTATATTCGAAGTAAAGGCTACTGCTGGTGATACTCATCTA 195970 || || | || || | || || ||||| || ||| | ||||||||||| ||||| | Sbjct 9149805 CTCCTTACCATCGAGGAGGGCATCTTCGAGGTCAAGTCGACTGCTGGTGACACTCACTTG 9149864 Query 195971 GGTGGTGAAGATTTCGATGCACGTCTTCTCCGTCA-TTTGTCTGATGAGTTCCGTCGAAA 196029 || ||||| || ||||| || || | || || ||| |||||||| || || Sbjct 9149865 GGCGGTGAGGACTTCGACAACCGCCTGGTGAACCACTTCGTC-AATGAGTTCAAGCGCAA 9149923 Query 196030 GAATAAGAAAGATATTTCTGGAAATCCTAGGGCTCTTCGTCGGCTTAGGACTGCATGTGA 196089 | | ||||| || | ||| || | || || || || || | || || || || Sbjct 9149924 GCACAAGAAGGACCTGTCTACCAACAGCCGTGCCCTGCGACGTCTCCGAACCGCTTGCGA 9149983 Query 196090 ACGTGCCAAACGAACTCTCTCTTCTACGGCTCAAACAATGGTTGAGATTGATTCGTTGTT 196149 || ||||| || ||||| ||||| | || || || | | || || || || |||| Sbjct 9149984 GCGCGCCAAGCGTACTCTGTCTTCCTCTGCCCAGACGTCGATCGAAATCGACTCTCTGTT 9150043 Query 196150 TGACGGAATTGACTTCTATACAACTATTACCCGTGCACGTTTTGAAGAGTTAAACTCTGA 196209 ||| || || || ||||| || | || ||||| || ||||| || ||| | | || Sbjct 9150044 TGAGGGCATCGATTTCTACACCTCCATCACCCGCGCTCGTTTCGAGGAGCTCTGCCAGGA 9150103 Query 196210 TTTGTTTAGGAAGTGTATGGAACCTGTTGAACAAGTACTTCGTGACGCAAAGATGGATAA 196269 | |||| | || | ||||| || | || || ||||| ||| |||| || Sbjct 9150104 TCTGTTCCGCTCCACCATCCAGCCTGTCGACCGCGTCCTGACCGACGCCAAGGTGGACAA 9150163 Query 196270 GTCTAAGGTTGATGAAATTGTCCTTGTGGGAGGATCAACCCGTATTCCGAAGATTCAACA 196329 | ||||| | || || |||||||| || || || || ||||| || | || | Sbjct 9150164 GAGCCAGGTTCACGAGATCGTCCTTGTCGGTGGCTCCACTCGTATCCCCCGAGTGCAGAA 9150223 Query 196330 GATGCTTTCTAGCTTCTTCAATAATAAAGATTTAAACAAAACGATCAACCCGGATGAAGC 196389 | | | | || |||||| || || ||||| | |||||||| || || || Sbjct 9150224 GCTCATCACCGACTACTTCAACGGCAAGGAGCCCAACAAGTCAATCAACCCTGACGAGGC 9150283 Query 196390 AGTTGCTTATGGTGCGGCCGTTCAGGCTGCTATTCTCTCAGGTG-----TTGACAATAAT 196444 ||||| || ||||| ||||| ||||||||||||||||| || | | | | | | | Sbjct 9150284 TGTTGCCTACGGTGCCGCCGTCCAGGCTGCTATTCTCTCTGGCGACACCTCGTCCA-AGT 9150342 Query 196445 AACGTCCAA-GATCTTCTGCTACTTGATGTTGCACCCGTATCCCTGGGTCTTGAAACAGC 196503 || |||| || | ||||| || || || || || | ||| | ||| | || || || Sbjct 9150343 --CGACCAACGAGATCCTGCTTCTCGACGTCGCTCCTCTCTCCATTGGTATCGAGACTGC 9150400 Query 196504 GGGTGGTGTTATGACTAAAATTATTGATAGGAACACAACTATTCCGACTAAGAAGGAACA 196563 || || | ||||| || | || | ||||| || || || || |||||| | Sbjct 9150401 TGGCGGCATGATGACCAAGCTCATCCCCCGCAACACCACCATCCCCACGAAGAAGTCCGA 9150460 Query 196564 AGTCTTTTCAACGTATTCCGATAATCAACCAGGTGTTCATATTCAAGTATATGAAGGAGA 196623 ||||| || || | ||||| || || || ||||| | ||||| || || || || || Sbjct 9150461 GGTCTTCTCCACCTTCTCCGACAACCAGCCTGGTGTGCTCATTCAGGTCTACGAGGGTGA 9150520 Query 196624 ACGCTCCCGTGCAAAGGATAACCATCTACTTGGAACTTTCGATTTGACGGGGATTCCAGC 196683 ||| || | ||||| ||| | || || || | || || | ||||| || || | Sbjct 9150521 GCGCCAGCGCACCAAGGACAACAACCTGCTCGGCAAGTTTGAGCTCACGGGCATCCCTCC 9150580 Query 196684 TGCACCCAGAGGTGTTCCACAGATTAATGTTTGCTTCGATATAGACGCAAATGGAATTCT 196743 ||| || | ||||| || ||||| | || ||| || | ||||| || || ||| | Sbjct 9150581 TGCTCCTCGTGGTGTGCCTCAGATCGAGGTCACCTTTGACGTCGACGCCAACGGTATTAT 9150640 Query 196744 AAACGTCACAGCTGAGGACAAGGCTTCTGGCAAATCTGAAAAGATTGTGATTACCAATGA 196803 || ||| | |||| || |||| ||||||| || | |||||||| |||||||| || Sbjct 9150641 CAATGTCTCTGCTGTCGAGAAGGGCACTGGCAAGTCCAACAAGATTGTCATTACCAACGA 9150700 Query 196804 CAAGGGGCGGCTTTCTAAGGAGGAAATTGAACGTATGGTTCAAGATGCGGAAAAGTACAG 196863 |||||| || || || || ||||| ||||| || ||| | ||||| || ||||||| Sbjct 9150701 CAAGGGCCGCCTGTCCAAAGAGGACATTGAGCGCATGCTGGCTGATGCCGAGAAGTACAA 9150760 Query 196864 GGAAGAAGACGAGG 196877 ||| || ||||||| Sbjct 9150761 GGACGAGGACGAGG 9150774 Score = 138 bits (152), Expect = 1e-27 Identities = 139/181 (77%), Gaps = 0/181 (0%) Strand=Plus/Minus Query 171871 TTTGTGAAAACCCTTACTGGAAAAACTATCACCCTCGAGGTTGAGTCGTCAGACACAATC 171930 || ||||| ||||| || || || || || || || || || ||||| || ||||| ||| Sbjct 3488468 TTCGTGAAGACCCTAACGGGCAAGACGATTACGCTTGAAGTCGAGTCTTCTGACACTATC 3488409 Query 171931 GATAACATCAAAGCCAAGATTCAAGATAAGGAAGGCATTCCACCCGATCAGCAACGACTT 171990 || || |||| ||||||| || || ||||| |||||||| || ||||||||| || | Sbjct 3488408 GACAATGTCAAGTCCAAGATCCAGGACAAGGAGGGCATTCCCCCGGATCAGCAAAGATTG 3488349 Query 171991 ATTTTTGCTGGTAAACAGCTTGAAGATGGACGTACCCTCGCTGATTACAACGTTCAAAAG 172050 || ||||||||||| ||||| ||||||||||| || | | || |||||| | || ||| Sbjct 3488348 ATCTTTGCTGGTAAGCAGCTCGAAGATGGACGGACTTTGTCGGACTACAACATCCAGAAG 3488289 Query 172051 G 172051 | Sbjct 3488288 G 3488288 >seq3 Length=9751215 Score = 145 bits (160), Expect = 1e-29 Identities = 161/215 (75%), Gaps = 0/215 (0%) Strand=Plus/Minus Query 171874 GTGAAAACCCTTACTGGAAAAACTATCACCCTCGAGGTTGAGTCGTCAGACACAATCGAT 171933 || || || || || || || || |||||||||||||| ||||| || ||||||||||| Sbjct 4593310 GTCAAGACACTCACGGGCAAGACCATCACCCTCGAGGTGGAGTCTTCGGACACAATCGAC 4593251 Query 171934 AACATCAAAGCCAAGATTCAAGATAAGGAAGGCATTCCACCCGATCAGCAACGACTTATT 171993 || |||| | ||||| || || ||||| ||||| || || || |||||||| || || Sbjct 4593250 AATGTCAAGTCGAAGATCCAGGACAAGGAGGGCATCCCGCCTGACCAGCAACGCCTCATC 4593191 Query 171994 TTTGCTGGTAAACAGCTTGAAGATGGACGTACCCTCGCTGATTACAACGTTCAAAAGGAG 172053 ||||| || || ||||| || || || || ||||| || |||||| | || |||||| Sbjct 4593190 TTTGCCGGCAAGCAGCTCGAGGACGGCCGGACCCTGAGCGACTACAACATCCAGAAGGAG 4593131 Query 172054 TCTACTCTACACCTTGTTCTAAGGCTTCGGGGTGG 172088 || || || ||||| || || | || || ||||| Sbjct 4593130 TCGACGCTCCACCTCGTCCTCCGTCTCCGCGGTGG 4593096 Score = 140 bits (154), Expect = 4e-28 Identities = 158/212 (75%), Gaps = 0/212 (0%) Strand=Plus/Minus Query 171862 ATGCAAATCTTTGTGAAAACCCTTACTGGAAAAACTATCACCCTCGAGGTTGAGTCGTCA 171921 ||||| ||||| || || || | || || || || ||||| | ||||| || ||||| Sbjct 4593094 ATGCAGATCTTCGTCAAGACGTTGACCGGCAAGACGATCACGTTGGAGGTGGAATCGTCG 4593035 Query 171922 GACACAATCGATAACATCAAAGCCAAGATTCAAGATAAGGAAGGCATTCCACCCGATCAG 171981 ||||||||||| ||| | || ||||||||| || ||||| ||||| || ||||| ||| Sbjct 4593034 GACACAATCGACAACGTAAAGAGCAAGATTCAGGACAAGGAGGGCATCCCGCCCGACCAG 4592975 Query 171982 CAACGACTTATTTTTGCTGGTAAACAGCTTGAAGATGGACGTACCCTCGCTGATTACAAC 172041 || || || ||||| || || || ||||| || || || |||||| | || |||||| Sbjct 4592974 CAGCGCCTGATTTTCGCCGGCAAGCAGCTCGAGGACGGCCGTACCTTGAGCGACTACAAC 4592915 Query 172042 GTTCAAAAGGAGTCTACTCTACACCTTGTTCT 172073 | || |||||| |||||||| ||||| || Sbjct 4592914 ATCCAGAAGGAGAGCACTCTACATCTTGTACT 4592883 Score = 116 bits (128), Expect = 5e-21 Identities = 171/238 (72%), Gaps = 3/238 (1%) Strand=Plus/Plus Query 195750 GACAGGCGACAAAGGACGCTGCTGCTATTGCGGGTCTAAACTGTCTTAGAATTATCAATG 195809 ||||||| || |||||||| | | ||||| || | ||| || ||||| |||||| Sbjct 4701781 GACAGGCCACCAAGGACGCCGGTATCATTGCCGGCTTGAACGTGCTCCGAATTGTCAATG 4701840 Query 195810 AACCAACAGCGGCTGCAATTGCTTATGGTCTGGACAAGAACAAGGACGAAGATAAAAATG 195869 | || || || || || || || || || |||||||||| | | | ||| | | || Sbjct 4701841 AGCCCACCGCCGCGGCCATCGCGTACGGCCTGGACAAGACCGAAGGCGA-GCGCCAGATC 4701899 Query 195870 TATTGATCTTTGATCTCGGTGGTGGTACGTTTGATGTCTCACTTCTCAATATTGAAGGTG 195929 || | ||| ||||| ||||||||||| ||||||||||| || ||| || || | Sbjct 4701900 -ATCG-TCTACGATCTTGGTGGTGGTACCTTTGATGTCTCCCTCCTCTCCATCGACCAGG 4701957 Query 195930 GTATATTCGAAGTAAAGGCTACTGCTGGTGATACTCATCTAGGTGGTGAAGATTTCGA 195987 || | ||||| || ||||||||||||||| || || || |||||||| ||||| || Sbjct 4701958 GTGTTTTCGAGGTTCTGGCTACTGCTGGTGACACCCACCTGGGTGGTGAGGATTTTGA 4702015 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 657862169748160