Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Drechmeria_20coniospora_20[genbank_20GCA_5F001625195.1_202016-04-24] 28 sequences; 32,831,003 total letters Query= NC_021923.1 Length=140633 Score E Sequences producing significant alignments: (Bits) Value seq3 244 1e-59 seq1 82.4 7e-11 >seq3 Length=9751215 Score = 244 bits (270), Expect = 1e-59 Identities = 1081/1681 (64%), Gaps = 68/1681 (4%) Strand=Plus/Minus Query 138358 ATCTCCCACACGGTCTTGTATAGATCACGAATATGTCG--CGGTATTGTTGCAATATTTT 138415 |||||||| || |||||||| || | || |||| ||| || | ||||| || | Sbjct 5390561 ATCTCCCAGACCGTCTTGTAGAGGGCCTTGAT--GTCGGCCGGGATGTTGGCAATGTTCT 5390504 Query 138416 GAATGCTCCCGTTGGCCGCAATGATGCGATTTCTCATGTCATCGTTGTACAGATTC--AA 138473 | || |||||| |||| |||||||| || |||| | ||| | |||| || | Sbjct 5390503 GGATCGACCCGTTCTCCGCGATGATGCGGTTCTTCATCGCGTCG--GACCAGAGTCCCAT 5390446 Query 138474 CTTGATCAAGTCGTTTATCAGATATCTGTTTATGACCTGAAATTCACCGGCCAATACTCG 138533 | || | ||| || | ||| | ||| | |||||||| || ||||| | || || Sbjct 5390445 GTCGACGAGGTCCTTGAGCAGCCAGGGGTTGACCACCTGAAACTCGCCGGCGAGGACGCG 5390386 Query 138534 ACGAACGTAAATGTTGTTGGTGAAAGGCTCAAACGATTCGTTGTTTCCCAGAATCTGAGC 138593 || ||| |||||| ||| | ||||| || | |||||||| ||||| ||||| | Sbjct 5390385 GCGCTGGTAGATGTTGGACGTGTACGGCTCGAAGCACTCGTTGTTGCCCAGGATCTGCGA 5390326 Query 138594 CGTGGTCGCGGTCGGCATGTACGCCACCAAAAGAGAATTCCGTAAACCGTGAAGCTTGAT 138653 |||| | || |||||||| ||| | || || || || | ||||| |||||| Sbjct 5390325 CGTGCTGGCCGTCGGCATCGGCGCGAGCAGCAGGCTGTTGCGGATGCCGTGCTCCTTGAT 5390266 Query 138654 -TCGTTCCTTGAGCGACGACCAGTCCCACAAATCGCTAGGTTTTTTGTTCCACATATCGT 138712 ||| | |||| | ||| ||||| || || || ||||||||| ||| Sbjct 5390265 CTCGGCGCGC-AGCGTCTCCCACTCCCAATGGTCCGACGGCTTGACGTTCCACATGTCGA 5390207 Query 138713 ACTGTAACATTCCCAAACTTGCG-GGACTGCCTTCGTACGAA--TCGTATACA--CCAAA 138767 |||| | || ||| | || || | || || | || ||| ||| || Sbjct 5390206 ACTGGAGGATGCCC-----TCCGAGGCCGGCGATCCCTCAAAGGTCGAGTACGGGCCCTG 5390152 Query 138768 CTCTTGCGCCAACTCGTTGCTCGCCTCGAGCGCACCATAGTAAATAGTTTCGGCAATCTG 138827 ||| | | || |||| | || || || | | ||| || || ||| ||||| Sbjct 5390151 CTCCTTGGACAGCTCGACCGACTCCGTCAGGGCCGCGTGGTAGATGGTCTCGAAGATCTG 5390092 Query 138828 CTGATTGAGCAATCGGGCCTCGGCGCTCTCGTACGGCATGCGGAGCATCGTGAACGCGTC 138887 || || ||| || ||||||| | |||| | |||||||| ||| ||| ||||| Sbjct 5390091 CTTGTTCAGCTCGCGCGCCTCGGGGGACTCGAAGGGCATGCGCAGCGCGAGGAAGGCGTC 5390032 Query 138888 GGCCAGCCCTTGCACGCCCACTCCGACAGGGCGATGGCGCAGATTTGACGCTTTTGCG-G 138946 ||| || || || ||||| || |||| || || ||||| | || ||| ||||| | Sbjct 5390031 GGCGAGGCCCTGGACGCCGACGCCGATGGGTCGGTGGCGGAAGTT----GCTGTTGCGCG 5389976 Query 138947 CTTC---GATAGGATAATAGTTTACATCGATGATTTTGTTTAAATTTCGCACGACCACCT 139003 | || || || || | ||| || |||||||| ||| | || || ||||| || Sbjct 5389975 CCTCCTGGACGGGGTAGTGGTTGACGTCGATGATGCGGTTGAGGTTGCGGACGACGACGC 5389916 Query 139004 TAGTCGTATGCTTTAATCGT-TCAAAATCGTATGTGCCCCCGTTGTCGTCGACGACGTC- 139061 ||| | | | | | | | || ||||| |||| |||||| |||||| | | | Sbjct 5389915 GCGTCACCT-CGTGCAGCTTCTTGAAGTCGTAGCAGCCCTCGTTGTAGTCGACAAAGGCC 5389857 Query 139062 GACAAATTTGTTGACACAAATCGAGGCTATGTTGCACACCGCCACTTCGTCGGGGTCGCT 139121 | || | | | ||| || | |||||| || ||||| |||||||| | Sbjct 5389856 GGCAG-------GGCG---AGCGACGCGAGGTTGCAGACGGCCACCTCGTCGGGCGCCGA 5389807 Query 139122 GTATTCGACAATTTCGGCACACAAATTACTACACTTGATCGTACCTAAATTTTGTTGATT 139181 ||| |||| || |||| |||| || | |||||| || | || | || || Sbjct 5389806 GTACTCGATGATCTCGGTGCACAGGTTGGAGCTGCGGATCGTCCCGAGGTTCTTCTGGTT 5389747 Query 139182 GCTTTTTCGGTTACAAGCATCTTTGTAAAGCATATACGGTGTGCCAGTTTCCACTTGTGT 139241 ||| || ||||| || || || ||||| ||||| | || |||| || ||| || | Sbjct 5389746 GCTCTTGCGGTTGCACGCGTCCTTGTACAGCATGAAGGGGTTGCCCGTCTCCGTCTGGGC 5389687 Query 139242 CTCTATAATGAATTTGAACAAGTCCCTAGCTTGTA---TTTGACGCACGTAAAGTTCGTC 139298 ||| | || | | | | | | || | | | | || || | | || Sbjct 5389686 CTCGAGGATCGAGTACCAGAGCTTCTGGGCGCGGACCGTCTTGCGGCCGC---GGCCCTC 5389630 Query 139299 GCGCTCGTACTTTTCGTAGAGTTCGTCGAA-TCGTTCACCGTAGGCGTCAGAAAGATCGC 139357 |||||||||||||||||| || | ||||| |||| | |||||| ||| | || || Sbjct 5389629 GCGCTCGTACTTTTCGTACAGCGCCTCGAACTCGT-CGCCGTAGCAGTCGGCGAGGCCGG 5389571 Query 139358 GACACTTGTCAGGACACATGAGCGACCATACGCCGTTCGCCTTGACGCGCCTCATGAACA 139417 | |||| || || |||||||||| ||| |||||||| || ||||||| ||||||| | Sbjct 5389570 GGCACTCGTTGGGGCACATGAGCGTCCAGTCGCCGTTCTTCTCGACGCGCTTCATGAAGA 5389511 Query 139418 GATCCGGAATCCACAAAGCGAACAGCAAATCGCGCGCCTTCTTATCTTCCGAACCCATGT 139477 | || || ||||| | |||| | || |||||||| | || ||| || || Sbjct 5389510 GGTCGGGGATCCAGAGCGCGAGGAACAGGTCGCGCGCGCGCACCTCCTCCTTGCCGTGGT 5389451 Query 139478 TACGTTTCATGTTAAGGAAATCAAAAACGTCAGCGTGCCATGGTTCCAGATAGATGGCCA 139537 | || || || || ||||||||||| |||||||| |||||||| |||||||| | Sbjct 5389450 TCTTGCGCAGGTCGAGAAACTCAAAAACGTCGGCGTGCCACGGTTCCAGGTAGATGGCGA 5389391 Query 139538 TTGCGCCTTTCCGTTTG---CCACCTTGATCGACGTGTCGTACAGCATTATTGAATACGC 139594 ||||| ||| ||| || || || ||||||| || | | || ||||| |||| Sbjct 5389390 AGGCGCCCGGCCGCTTGTTGCCGCCCTGGTCGACGTACCGGGCCGTGTTGTTGAAGACGC 5389331 Query 139595 GCAACATCGGCTCCAGACCGCTCGCTGTTCCGTTGGTGCTACGG--ATG--GGA-CTGTT 139649 | | ||| ||| | ||| | | || |||||||||| ||| ||| ||| | | | Sbjct 5389330 GAAGCATGGGCGTGATGCCGTTGGAGGTACCGTTGGTGC--CGGCAATGTAGGATCCGGT 5389273 Query 139650 GCGAGCTCGGACGTCATGTACATTGATGCCGATTCCGCCGCCAAATTTGGATATTAAAAC 139709 | || |||| | || | |||| |||||| |||||| | | ||||| || | | Sbjct 5389272 G---GCGCGGATGCGGTGGATGTTGAGGCCGATGCCGCCGGCCATCTTGGAGATCATGGC 5389216 Query 139710 GCAA-TCGCGTAATGTCTCGTATATACCTCTTATGCTGTCGTCCTGCATCGTGACCAGAA 139768 ||| || | | || ||||| || || ||||||||||||| ||| ||| || | Sbjct 5389215 GCACGTCTTG-AGCGTGTCGTAGATGCCCTCGATGCTGTCGTCCTTCATGTCGACGAGGA 5389157 Query 139769 AGCATGACGAAAGTTGCGGTAGTTTCGTGCCGGCTGCAAACAGAGTAGGACTCGCGTGCG 139828 |||| ||||| || |||| | ||||||||| || || || || ||||||| Sbjct 5389156 AGCACGACGACAGCTGCGCCTGCGGCGTGCCGGCGTTGAAGAGCGTCGGCGAGGCGTGCG 5389097 Query 139829 TGAACATTTGTTTCGACATCAATTCGTACGTTTCGATGGCGCTCACAATATCCCTTCCGT 139888 ||||||| | ||||||| | | |||||| |||||| ||| | | || | || Sbjct 5389096 TGAACATCTTGCTCGACATGAGATTGTACGTCTCGATGACGCGCTCGATGTTGTCGCCCC 5389037 Query 139889 GGATACCGACAGAGACTCGCATCAGCATATGTTGGATCCGTTCGGCCACCGCGCCCTCGA 139948 ||| ||||| || || ||||| | ||| || || || ||| | | | ||| | || Sbjct 5389036 AGATGCCGACCGACACGCGCATGATCATGTGCTGCGGTCGCTCGACGATCTTGCCGTTGA 5388977 Query 139949 tttttttCAGATA--ACCGTTCTCTAGGGTCTTGTAGCCAAAGTACCTATAGTTGAAATC 140006 || || || | || ||| || |||||| ||||||||||| |||||||| || Sbjct 5388976 GCTTGAGGAGGTAGGATCG--CTCGAGAGTCTTGAAGCCAAAGTACTGGTAGTTGAAGTC 5388919 Query 140007 G 140007 | Sbjct 5388918 G 5388918 Score = 87.8 bits (96), Expect = 2e-12 Identities = 156/228 (68%), Gaps = 0/228 (0%) Strand=Plus/Minus Query 24704 ATGCAGATCTTTATTAAAACGCTAACCGGTAAAACTATTACGCTCGAAGTAGAAGCCACC 24763 ||||||||||| | || ||| | ||||| || || || ||| | || || ||| | | Sbjct 4593094 ATGCAGATCTTCGTCAAGACGTTGACCGGCAAGACGATCACGTTGGAGGTGGAATCGTCG 4593035 Query 24764 GACACAGTAGAAACGGTAAAACAAAAGATCCAAGACAAAGAAGGAATACCTCCCGATCAA 24823 |||||| | || | ||||| ||||| || ||||| || || || || ||||| || Sbjct 4593034 GACACAATCGACAACGTAAAGAGCAAGATTCAGGACAAGGAGGGCATCCCGCCCGACCAG 4592975 Query 24824 CAACGTTTGATCTTTGCCGGGAAACAGCTGGAGGATTCGAGAAACATGTCAGATTATAAC 24883 || || |||| || ||||| || ||||| ||||| | | | || || || ||| Sbjct 4592974 CAGCGCCTGATTTTCGCCGGCAAGCAGCTCGAGGACGGCCGTACCTTGAGCGACTACAAC 4592915 Query 24884 ATTCAAAAGGAATCGACACTACACTTGGTGTTGCGATTGCGCGGAGGC 24931 || || ||||| || ||||| | || |||| ||||||| ||| Sbjct 4592914 ATCCAGAAGGAGAGCACTCTACATCTTGTACTGCGCCTGCGCGGCGGC 4592867 >seq1 Length=12542233 Score = 82.4 bits (90), Expect = 7e-11 Identities = 123/175 (70%), Gaps = 0/175 (0%) Strand=Plus/Minus Query 24719 AAAACGCTAACCGGTAAAACTATTACGCTCGAAGTAGAAGCCACCGACACAGTAGAAACG 24778 || || ||||| || || || |||||||| ||||| || | | ||||| | || | Sbjct 3488462 AAGACCCTAACGGGCAAGACGATTACGCTTGAAGTCGAGTCTTCTGACACTATCGACAAT 3488403 Query 24779 GTAAAACAAAAGATCCAAGACAAAGAAGGAATACCTCCCGATCAACAACGTTTGATCTTT 24838 || || |||||||| ||||| || || || || || ||||| ||| | ||||||||| Sbjct 3488402 GTCAAGTCCAAGATCCAGGACAAGGAGGGCATTCCCCCGGATCAGCAAAGATTGATCTTT 3488343 Query 24839 GCCGGGAAACAGCTGGAGGATTCGAGAAACATGTCAGATTATAACATTCAAAAGG 24893 || || || ||||| || ||| | | |||| || || ||||| || |||| Sbjct 3488342 GCTGGTAAGCAGCTCGAAGATGGACGGACTTTGTCGGACTACAACATCCAGAAGG 3488288 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 449897442535840