Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Drechmeria_20coniospora_20[genbank_20GCA_5F001625195.1_202016-04-24]
28 sequences; 32,831,003 total letters
Query= NC_022646.1
Length=101818
Score E
Sequences producing significant alignments: (Bits) Value
seq3 127 1e-24
seq1 84.2 1e-11
>seq3
Length=9751215
Score = 127 bits (140), Expect = 1e-24
Identities = 156/213 (73%), Gaps = 0/213 (0%)
Strand=Plus/Plus
Query 34765 CAGGACCAGGTGAATGGTGCTCTCCTTCTGAATGTTATAGTCCGATAGGCTGCGCTCATC 34824
||| || ||||| | ||||||||||||||| ||||| ||||| ||| |||| ||||
Sbjct 625486 CAGCACGAGGTGCAGGGTGCTCTCCTTCTGGATGTTGTAGTCGCTCAGGGTGCGGCCATC 625545
Query 34825 GTCCAGTTGCTTTCCGGCGAAGATCAGTCGTTGCTGGTCTTGCGGCACCCCCTCCTTGTC 34884
|| || ||||| ||||||||||| || || || ||||| | || | |||||||||||
Sbjct 625546 CTCGAGCTGCTTGCCGGCGAAGATGAGGCGCTGTTGGTCGGGGGGGATGCCCTCCTTGTC 625605
Query 34885 GTTTATTTTTTGTTTGACGGATGCTATCGATTCATTGGCCTCGACATCAACGGTTATGGT 34944
| || || |||||| | || | || | ||| || |||| ||| || ||
Sbjct 625606 CTGGATCTTGGACTTGACGTTGTCGATGGTGTCGGAAGACTCCACCTCAAGGGTGATCGT 625665
Query 34945 CTTTCCCGTGAGGGTCTTTACAAAGATCTGCAT 34977
||| |||||||||||||| || || ||||||||
Sbjct 625666 CTTCCCCGTGAGGGTCTTGACGAAAATCTGCAT 625698
Score = 91.5 bits (100), Expect = 1e-13
Identities = 144/204 (71%), Gaps = 8/204 (4%)
Strand=Plus/Plus
Query 34766 AGGACCAGGTGAATGGTGCTCTCCTTCTGAATGTTATAGTCCGATAGGCTGCGCTCATCG 34825
||||| ||||| | || ||||||||| ||||| ||||| ||| | || | ||
Sbjct 4593111 AGGACGAGGTGGAGCGTCGACTCCTTCTGGATGTTGTAGTCGCTCAGGGTCCGGCCGTCC 4593170
Query 34826 TCCAGTTGCTTTCCGGCGAAGATCAGTCGTTGCTGGTCTTGCGGCACCCCCTCCTTGTCG 34885
|| || ||||| ||||| ||||| || ||||||||||| |||| | |||||||||||
Sbjct 4593171 TCGAGCTGCTTGCCGGCAAAGATGAGGCGTTGCTGGTCAGGCGGGATGCCCTCCTTGTCC 4593230
Query 34886 TTTATTTTTTGTTTGACGGATGCTATCGAT----TCATTGGCCTCGACATCAACGGTTAT 34941
| || || ||||| || | ||||| || | ||| || || | ||| ||
Sbjct 4593231 TGGATCTTCGACTTGAC--AT--TGTCGATTGTGTCCGAAGACTCCACCTCGAGGGTGAT 4593286
Query 34942 GGTCTTTCCCGTGAGGGTCTTTAC 34965
|||||| |||||||| ||||| ||
Sbjct 4593287 GGTCTTGCCCGTGAGTGTCTTGAC 4593310
Score = 91.5 bits (100), Expect = 1e-13
Identities = 134/190 (71%), Gaps = 0/190 (0%)
Strand=Plus/Plus
Query 34766 AGGACCAGGTGAATGGTGCTCTCCTTCTGAATGTTATAGTCCGATAGGCTGCGCTCATCG 34825
||||| ||||| | || ||||||||| ||||| || || || | | | || ||||
Sbjct 4593403 AGGACGAGGTGGAGCGTCGACTCCTTCTGGATGTTGTAATCGGACAAGGTCCGGCCATCC 4593462
Query 34826 TCCAGTTGCTTTCCGGCGAAGATCAGTCGTTGCTGGTCTTGCGGCACCCCCTCCTTGTCG 34885
|| || ||||| |||||||| ||||| || |||||||| | || | |||||||||||
Sbjct 4593463 TCGAGCTGCTTGCCGGCGAAAATCAGGCGCTGCTGGTCGGGAGGGATGCCCTCCTTGTCC 4593522
Query 34886 TTTATTTTTTGTTTGACGGATGCTATCGATTCATTGGCCTCGACATCAACGGTTATGGTC 34945
| || || ||||| | |||| || | |||||| |||| || ||||||
Sbjct 4593523 TGGATCTTCGACTTGACATTGTCGATCGTGTCCGACGACTCGACCTCAAGCGTGATGGTC 4593582
Query 34946 TTTCCCGTGA 34955
|| |||||||
Sbjct 4593583 TTGCCCGTGA 4593592
Score = 84.2 bits (92), Expect = 1e-11
Identities = 147/214 (69%), Gaps = 0/214 (0%)
Strand=Plus/Plus
Query 34765 CAGGACCAGGTGAATGGTGCTCTCCTTCTGAATGTTATAGTCCGATAGGCTGCGCTCATC 34824
||| || || || | |||||||||||||| ||||| ||||| | | | || | ||
Sbjct 4592882 CAGTACAAGATGTAGAGTGCTCTCCTTCTGGATGTTGTAGTCGCTCAAGGTACGGCCGTC 4592941
Query 34825 GTCCAGTTGCTTTCCGGCGAAGATCAGTCGTTGCTGGTCTTGCGGCACCCCCTCCTTGTC 34884
|| || ||||| |||||||| ||||| || |||||||| |||| | |||||||||||
Sbjct 4592942 CTCGAGCTGCTTGCCGGCGAAAATCAGGCGCTGCTGGTCGGGCGGGATGCCCTCCTTGTC 4593001
Query 34885 GTTTATTTTTTGTTTGACGGATGCTATCGATTCATTGGCCTCGACATCAACGGTTATGGT 34944
| || || || ||| | || | || | || || || | || || ||
Sbjct 4593002 CTGAATCTTGCTCTTTACGTTGTCGATTGTGTCCGACGATTCCACCTCCAACGTGATCGT 4593061
Query 34945 CTTTCCCGTGAGGGTCTTTACAAAGATCTGCATG 34978
||| || || | ||||| || ||||||||||||
Sbjct 4593062 CTTGCCGGTCAACGTCTTGACGAAGATCTGCATG 4593095
>seq1
Length=12542233
Score = 84.2 bits (92), Expect = 1e-11
Identities = 131/185 (71%), Gaps = 8/185 (4%)
Strand=Plus/Plus
Query 34788 CCTTCTGAATGTTATAGTCCGATAGGCTGCGCTCATCGTCCAGTTGCTTTCCGGCGAAGA 34847
||||||| ||||| |||||||| | | || |||| || || ||||| || || ||||
Sbjct 3488288 CCTTCTGGATGTTGTAGTCCGACAAAGTCCGTCCATCTTCGAGCTGCTTACCAGCAAAGA 3488347
Query 34848 TCAGTCGTTGCTGGTCTTGCGGCACCCCCTCCTTGTCGTTTATTTTTTGTTTGACGGATG 34907
||| || |||||| || | || | ||||||||||| | || || ||||| ||
Sbjct 3488348 TCAATCTTTGCTGATCCGGGGGAATGCCCTCCTTGTCCTGGATCTTGGACTTGAC--AT- 3488404
Query 34908 CTATCGAT----TCATTGGCCTCGACATCAACGGTTATGGTCTTTCCCGTGAGGGTCTTT 34963
| ||||| ||| | |||||| |||| || || ||||| ||||| ||||||||
Sbjct 3488405 -TGTCGATAGTGTCAGAAGACTCGACTTCAAGCGTAATCGTCTTGCCCGTTAGGGTCTTC 3488463
Query 34964 ACAAA 34968
|| ||
Sbjct 3488464 ACGAA 3488468
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 325692688857332
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |