Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Drechmeria_20coniospora_20[genbank_20GCA_5F001625195.1_202016-04-24] 28 sequences; 32,831,003 total letters Query= NC_025960.1 Length=148981 Score E Sequences producing significant alignments: (Bits) Value seq3 275 6e-69 >seq3 Length=9751215 Score = 275 bits (304), Expect = 6e-69 Identities = 1002/1540 (65%), Gaps = 45/1540 (3%) Strand=Plus/Minus Query 146893 TTGACCACTTGAAACTCGCCCGCCAGCACACGTCTGAGATACACATTGCTAGTGAAAGGC 146952 |||||||| ||||||||||| || || || || | | || | ||| ||| | ||| Sbjct 5390417 TTGACCACCTGAAACTCGCCGGCGAGGACGCGGCGCTGGTAGATGTTGGACGTGTACGGC 5390358 Query 146953 TCAAAAGACTCATTATTGCCTAATATTTGGGCCGTGGTTGCGGTAGGCATGTACGCCACC 147012 || || |||| || ||||| | || || | |||| | || || ||||| ||| | | Sbjct 5390357 TCGAAGCACTCGTTGTTGCCCAGGATCTGCGACGTGCTGGCCGTCGGCATCGGCGCGAGC 5390298 Query 147013 AACAATGAATTTCGCAGACCGTACGCACGGATGTTGTCCTTCAAAGTTTGCCAGTCCCAC 147072 | || || || | |||| | | ||| | | | || || | ||| ||||| Sbjct 5390297 AGCAGGCTGTTGCGGATGCCGTGCTCCTTGATCTCGGCGCGCAGCGTCTCCCACTCCCA- 5390239 Query 147073 ATCGAC-GAGGGCGTCACGTTCCACATGTCGTACTGGAGCACTCCT--CGACTGGCGGGA 147129 || | | || ||| | ||||||||||||||| ||||||| | || ||| ||| || Sbjct 5390238 ATGGTCCGACGGCTTGACGTTCCACATGTCGAACTGGAGGATGCCCTCCGA--GGCCGGC 5390181 Query 147130 CTGCCAGCGAACGTAGTGTAGCTTCCGTCGCGCTGCGCCAATTC-ACAGCTTGCCTCGAG 147188 || | || || | ||| || | || | || || || | | | || || Sbjct 5390180 GATCCCTCAAAGGTCGAGTACGGGCCCTGCTCCTTGGACAGCTCGACCGACTCCGTC-AG 5390122 Query 147189 CGCTCCATAGTATATGGTTTCGGCGATTTGTTTGTTTAGGACGGTCGCTTCTTCGCTCTC 147248 || | | ||| ||||| ||| ||| || ||||| || || ||| || | ||| Sbjct 5390121 GGCCGCGTGGTAGATGGTCTCGAAGATCTGCTTGTTCAGCTCGCGCGCCTCGGGGGACTC 5390062 Query 147249 GTAAGGCATACGCAGAAGCACAAAGGCATCGGCCAAACCCTGGATACCGACGCCGATAGG 147308 | | ||||| ||||| | ||||| ||||| | ||||||| ||||||||||| || Sbjct 5390061 GAAGGGCATGCGCAGCGCGAGGAAGGCGTCGGCGAGGCCCTGGACGCCGACGCCGATGGG 5390002 Query 147309 TCGATGCTTTTCGTTGCTGCGCTTCGCGCTCGCT--ATGGGATAGTGGTTGCGATCAATA 147366 ||| || ||||||| | ||||| || | ||| ||||||||| || || Sbjct 5390001 TCGGTGGCGGAAGTTGCTGT--TGCGCGCCTCCTGGACGGGGTAGTGGTTGACGTCGATG 5389944 Query 147367 ATCTTGTTGAGGTTACGCACTACAACTTTAGTTATTGTTTTGAGTTTCTCGAAATCATA- 147425 || ||||||||| || || || || || | | || |||| ||| || || Sbjct 5389943 ATGCGGTTGAGGTTGCGGACGACGACGCGCGTCACCTCGTGCAGCTTCTTGAAGTCGTAG 5389884 Query 147426 -AGTCC-CGTCTTCGAC-ACGTACGCATTGGTTCACGGCGATAGACGCCAGATTGCAGAC 147482 || || ||| | | | || | || || || ||||| ||||| || |||||||| Sbjct 5389883 CAGCCCTCGTTGTAGTCGACAAAGGCC--GG--CAGGGCGAGCGACGCGAGGTTGCAGAC 5389828 Query 147483 GGCCGTCTCTTCGG-CGTCGCTGTACTGCACGATTTCGGCGCACAGGTTGCTGCATTTTA 147541 |||| ||| |||| || || ||||| | ||| |||| |||||||||| || | Sbjct 5389827 GGCCACCTCGTCGGGCGCCGA-GTACTCGATGATCTCGGTGCACAGGTTGGAGCTGCGGA 5389769 Query 147542 TGACTCCCAAATTTTGCTGATTGCTTTTCCGATTGCACGCGTCTTTGAAGAGCATGTACG 147601 | || | || | ||| ||||| || || ||||||||||| ||| | |||||| | | Sbjct 5389768 TCGTCCCGAGGTTCTTCTGGTTGCTCTTGCGGTTGCACGCGTCCTTGTACAGCATGAAGG 5389709 Query 147602 GTCCGCCGGTCTCGACTTGCGTTTCAACGATAAACCTATGCAGGTCCTGCGCTCGCACCC 147661 | ||| ||||| || | || | ||| | || | ||| || || ||| Sbjct 5389708 GGTTGCCCGTCTCCGTCTGGGCCTCGAGGATCGAGTACCAGAGCTTCTGGGCGCGGACCG 5389649 Query 147662 GCTGCCGATAGCGGCCCTCGTTTTCGTACCGCTCGTACAACCGCTCAAACTCGTCGCCGT 147721 || || |||||||||| |||||| ||||||| | ||| ||||||||||||| Sbjct 5389648 TCTTGCGGCCGCGGCCCTCGCGCTCGTACTTTTCGTACAGCGCCTCGAACTCGTCGCCGT 5389589 Query 147722 AGCAATCGGCAAGGCCGGGACACTGATGCGGACACATCAGCGACCACATGTCGTCCGCGT 147781 |||| ||||| |||||||| |||| | || ||||| |||| ||| | ||| | | Sbjct 5389588 AGCAGTCGGCGAGGCCGGGGCACTCGTTGGGGCACATGAGCGTCCAGTCGCCGTTCTTCT 5389529 Query 147782 TAACGCGTCGCATAAACAGATCCGGCACCCACAGCGCGTACATAAGATCGCGCGCTTTGC 147841 ||||| ||| || || || || | ||| |||||| | || |||||||| || Sbjct 5389528 CGACGCGCTTCATGAAGAGGTCGGGGATCCAGAGCGCGAGGAACAGGTCGCGCGCGC-GC 5389470 Query 147842 AA----TCCTCGGCGCCCATGTTGCGTTTCAAATTAAGCACGCTATAGATGTCGGCGTGC 147897 | |||| | || | ||||| || | || | | | | |||||||||| Sbjct 5389469 ACCTCCTCCTTGCCGTGGTTCTTGCG---CAGGTCGAGAAACTCAAAAACGTCGGCGTGC 5389413 Query 147898 CAGGGTTCAATGTAGACGGCCAGCGCACCTTTACGCTTT---CCGCCCTGGTCGACATGG 147954 || ||||| | ||||| ||| | || || ||||| |||||||||||||| | Sbjct 5389412 CACGGTTCCAGGTAGATGGCGAAGGCGCCCGGCCGCTTGTTGCCGCCCTGGTCGACGTAC 5389353 Query 147955 CGCACCATGTTGTTAAACACGCGCACCATGGGTTCCAGGCCGCTCGCAGTGCCGTTGGTG 148014 || || ||||||| || ||||| | |||||| | |||| | | || ||||||||| Sbjct 5389352 CGGGCCGTGTTGTTGAAGACGCGAAGCATGGGCGTGATGCCGTTGGAGGTACCGTTGGTG 5389293 Query 148015 GAATTGATCTTGCTGCCGCGGGCTCGCACTTCGTGCACGTTAACGCCAATGCCGCCGCCG 148074 || | | ||| ||| || | ||| | ||| | ||| ||||||||| | Sbjct 5389292 CCGGCAATGTAGGATCCGGTGGCGCGGATGCGGTGGATGTTGAGGCCGATGCCGCCGGCC 5389233 Query 148075 TACTTTGATATGGCAGCGCAATCGCCC--AATGTCGTGTAGATGCCGTCGATGCTGTCGT 148132 ||| || || ||||| || | | || ||||||||| ||||||||||||| Sbjct 5389232 ATCTTGGAGATCATGGCGCA--CGTCTTGAGCGTGTCGTAGATGCCCTCGATGCTGTCGT 5389175 Query 148133 TTTTGACGCCAAGCAAAAAACACGAACACATTTGCGGAATCCGCGTTCCCGCCGAGAAAA 148192 || | | | | | || ||||| ||| |||| | |||| || || ||| | Sbjct 5389174 CCTTCATGTCGACGAGGAAGCACGACGACAGCTGCGCCTGCGGCGTGCCGGCGTTGAAGA 5389115 Query 148193 GGGTGGGACTCGCGTGCGTAAACAATTTTTGACTCATCATGCGA---TACGTCTCAATAG 148249 | || || |||||||| |||| | ||| ||| |||| || |||||||| || Sbjct 5389114 GCGTCGGCGAGGCGTGCGTGAACA--TCTTG-CTCGACATGAGATTGTACGTCTCGATGA 5389058 Query 148250 CGTCTTCGATGTCGTCGCCGTGAATGCCCAGCGCGACGCGCATGAGCATGTGCTGTGGTC 148309 || ||||||| |||||| ||||| | || |||||||||| ||||||||| |||| Sbjct 5389057 CGCGCTCGATGTTGTCGCCCCAGATGCCGACCGACACGCGCATGATCATGTGCTGCGGTC 5388998 Query 148310 GTTCGGC-AACTTGATTGTTGATCTTGAGAAGATATCCATTTTCGAGGGTTTTGTAACCA 148368 | ||| | | |||| ||||| |||||| || || ||||| || ||| | ||| Sbjct 5388997 GCTCGACGATCTTG-CCGTTGAGCTTGAGGAGGTAGGATCGCTCGAGAGTCTTGAAGCCA 5388939 Query 148369 AAGTACTTGTAATCAAAATCTAGCTCGTAAGCGATGGCCG 148408 ||||||| ||| | || || | ||||| ||||||||| Sbjct 5388938 AAGTACTGGTAGTTGAAGTCGCGGTCGTAGACGATGGCCG 5388899 Score = 86.0 bits (94), Expect = 6e-12 Identities = 134/192 (70%), Gaps = 0/192 (0%) Strand=Plus/Plus Query 131932 CTCTTTTTGAATGTTGTAGTCGCTCATGGTACGCGAATCTTCGAGCTGTTTACCGGAATA 131991 ||| || || |||||||||||||||| ||| || ||| |||||||| || |||| | Sbjct 625507 CTCCTTCTGGATGTTGTAGTCGCTCAGGGTGCGGCCATCCTCGAGCTGCTTGCCGGCGAA 625566 Query 131992 GATTAGACGCTGTTGATCTGGAGGTATGCCTTCTTTATCGGTAATTTTTTGTTTCAACTG 132051 ||| || |||||||| || || || ||||| || || || || || || | | Sbjct 625567 GATGAGGCGCTGTTGGTCGGGGGGGATGCCCTCCTTGTCCTGGATCTTGGACTTGACGTT 625626 Query 132052 TTCCACAGTATCGGTCGGCTCCACTTCGACCGTCAGCGTTTTACCAGTCAGAGTTTTTAT 132111 || | || |||| | |||||| || | || | ||| || || || || || || | Sbjct 625627 GTCGATGGTGTCGGAAGACTCCACCTCAAGGGTGATCGTCTTCCCCGTGAGGGTCTTGAC 625686 Query 132112 GAAAATCTGCAT 132123 |||||||||||| Sbjct 625687 GAAAATCTGCAT 625698 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 476611033186080