Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Drechmeria_20coniospora_20[genbank_20GCA_5F001625195.1_202016-04-24]
28 sequences; 32,831,003 total letters
Query= NC_026440.1
Length=2243109
Score E
Sequences producing significant alignments: (Bits) Value
seq3 233 3e-55
seq2 147 3e-29
seq1 87.8 3e-11
>seq3
Length=9751215
Score = 233 bits (258), Expect = 3e-55
Identities = 359/507 (71%), Gaps = 19/507 (4%)
Strand=Plus/Plus
Query 259681 GCACAAGGAGGTCCTCGACGCTGCCATCTGCCACGGCCGAGACTTTGGCTACTCGTACTT 259740
||||||||||| |||||| | |||||| | ||| ||| ||||| |||| ||||||
Sbjct 5388879 GCACAAGGAGGAGCTCGACTCGGCCATCGTCTACGACCGCGACTTCAACTACCAGTACTT 5388938
Query 259741 TGGTCTGGCGAC-CTTGCGCCGGTCCTACCTGACCAAAGTGCGCGATATTGTCGTCGAGC 259799
||| | ||| || | || | |||||||| ||| | || | |||||||||
Sbjct 5388939 TGGCTTCAAGACTCTCGAGC-GATCCTACCTCCTCAAGCTCAACGGCAAGATCGTCGAGC 5388997
Query 259800 GGCCCCAGTATATGCTCATGCGTGTCGCCCTTGGCCATTATGGGTTTGCCGACGTCGACA 259859
| || ||| | ||| ||||||| || | | ||| | |||| |||||
Sbjct 5388998 GACCGCAGCACATGATCATGCGCGTGTCGGTCGGCA--TCTGGGG----------CGACA 5389045
Query 259860 ATGCGCTGGAGCACGTGCTCGCCACCTACGAGGCCATGTCGCAGCA-GTTGTTCACCTCA 259918
| | |||| ||| ||| || ||| | ||||||| |||| | |||||||
Sbjct 5389046 ACA---TCGAGCGCGTCATCGAGACGTACAATCTCATGTCG-AGCAAGATGTTCACGCAC 5389101
Query 259919 GCGACGCCCACGCTCTTTAATGCCGGCACGCCGCGCCCGCAGAATTCGTCGTGCTTTCTG 259978
|| |||| |||||||| || ||||||||||||| ||||| ||||||||||| ||
Sbjct 5389102 GCCTCGCCGACGCTCTTCAACGCCGGCACGCCGCAGGCGCAGCTGTCGTCGTGCTTCCTC 5389161
Query 259979 TTGGACATGAAGGCCGATTCGATCGAGGGCATCTATGACACGCTCAAGCAGTGCGCGCTC 260038
| |||||||||| ||| |||||||||||||| |||||||||||| |||||| |
Sbjct 5389162 GTCGACATGAAGGACGACAGCATCGAGGGCATCTACGACACGCTCAAGACGTGCGCCATG 5389221
Query 260039 ATCTCCAAGGCGGCCGGCGGCATCGGTTTTGCCGCACACAAGGTGCGCGCCGCGGGCGCC 260098
||||||||| ||||||||||||||| | | ||| | |||||| | || ||
Sbjct 5389222 ATCTCCAAGATGGCCGGCGGCATCGGCCTCAACATCCACCGCATCCGCGCCACCGGATCC 5389281
Query 260099 TACGTGGCGGGCACCAACGGCCAGTCCAACGGCCTTGTGCCCATGCTTCGCGTTTTTAAC 260158
||| | || ||||||||||| ||||||||| | ||||||||||||||| || |||
Sbjct 5389282 TACATTGCCGGCACCAACGGTACCTCCAACGGCATCACGCCCATGCTTCGCGTCTTCAAC 5389341
Query 260159 GACACGGCGCGCTACGTCGACCAGTGC 260185
||||||| || |||||||||||| ||
Sbjct 5389342 AACACGGCCCGGTACGTCGACCAGGGC 5389368
Score = 174 bits (192), Expect = 2e-37
Identities = 368/543 (68%), Gaps = 22/543 (4%)
Strand=Plus/Plus
Query 262879 TGGGACTGGGACGCACTGCGGGCGTCG-GTTCGAC-AGCATGGCCTGCGCAACTCGTTGC 262936
||||| ||||| | ||||| || || | || | |||| ||| | |||||| |||
Sbjct 5390239 TGGGAGTGGGAGACGCTGCGCGC--CGAGATCAAGGAGCACGGCATCCGCAACAGCCTGC 5390296
Query 262937 TCGTGGCGCTCATGCCCACGGCCACGACGTCGCAGATCCTGGGCAACACCGAGGCGTTCG 262996
| | |||| ||||| ||||||| |||||||||||||||||||||| |||| ||||
Sbjct 5390297 TGCTCGCGCCGATGCCGACGGCCAGCACGTCGCAGATCCTGGGCAACAACGAGTGCTTCG 5390356
Query 262997 AGGTCATCACGAGCAACATCTACACGCGCCGCGTGCTCTCGGGCGACTTTACCGTGGTCA 263056
|| |||| |||||||||| ||||||||| ||| | ||||| ||| |||||||
Sbjct 5390357 AGCCGTACACGTCCAACATCTACCAGCGCCGCGTCCTCGCCGGCGAGTTTCAGGTGGTCA 5390416
Query 263057 ACCGCCACCTGGTCAAGCGCATGGTGGCGCGCGGCCTGTGGACGCCCGACTTTCGCGACC 263116
||| | ||| ||||| | | || | || || ||| | || | |||
Sbjct 5390417 ACCCCTGGCTGCTCAAGGACCTCGTCGACATGGGACTCTGGTCCGACGCGATGAAGAACC 5390476
Query 263117 GGCTCATTGCGGCACAGGGCTCGGTGCAGGGCTTTGACGACGAGGAGGTGCCGCCCGATC 263176
| |||| |||| | || ||| | ||| | ||| | || | ||| ||||
Sbjct 5390477 GCATCATCGCGGAGAACGGGTCGATCCAGAACATTGCCAAC------ATCCCGGCCGACA 5390530
Query 263177 TCAAGGCTCTCTTCAAGACCGTGTGGGAGGTGCCCAACCGGGTGACCATTGATATGGCGG 263236
||||||| |||| |||||| || |||||| | | | ||| | | | |||||||
Sbjct 5390531 TCAAGGCCCTCTACAAGACGGTCTGGGAGATTTCGCAGCGGCAGGTGGTGCAGATGGCGG 5390590
Query 263237 CCGACCGCGCGCCCTATGTCGACCAGAGCCAGTCGCTCAACCTGTACCTCGCCGACCCGA 263296
||||||||| ||| |||||||| ||||||||||||| | || | |||||||
Sbjct 5390591 CCGACCGCGGCGCCTTCATCGACCAGTCCCAGTCGCTCAACATTCACATGAAGGACCCGA 5390650
Query 263297 C---GGCCGAGAGCATCACGTCGATGCAC---GCCTATGCGTGGCGTCGCGGCCTCAAGA 263350
| || | || |||||| |||||| ||| | ||| | |||||||||||
Sbjct 5390651 CCATGGGCAAG---ATCACGAGCATGCACTTTGCC---GGCTGGAAGCTCGGCCTCAAGA 5390704
Query 263351 CTGGCATGTACTATCTGCGCACCCGGCCCGCTGCCAACGCCATTCAATTCACCGTCGATC 263410
| ||||||||||| ||||| || | |||| ||| |||| || ||||||||||| |
Sbjct 5390705 CGGGCATGTACTACCTGCGGACGCAAGCCGCCGCCGCGCCCATCCAGTTCACCGTCGACC 5390764
Query 263411 AGG 263413
|||
Sbjct 5390765 AGG 5390767
Score = 152 bits (168), Expect = 7e-31
Identities = 335/502 (67%), Gaps = 16/502 (3%)
Strand=Plus/Plus
Query 261788 GGCGGCGGCAAGCGCAAGGGCGCCTTTGCCTGCTACCTGGAACCGTGGCACGCCGACCTC 261847
|||||| |||||| ||||||||| ||| ||||||||||||||||||||||||| |
Sbjct 5389366 GGCGGCAACAAGCGGCCGGGCGCCTTCGCCATCTACCTGGAACCGTGGCACGCCGACGTT 5389425
Query 261848 ATCAACTGGCTGGACCTCAAAAAGAACCACGGCAAGGGAGGGGGAGAACCGGGCGCGCGC 261907
| | | || ||||| |||||||||||||| ||||| || | ||||||||
Sbjct 5389426 TTTGAGTTTCTCGACCTGCGCAAGAACCACGGCAA-GGAGGAGG-----TGCGCGCGCGC 5389479
Query 261908 GATCTCTTTTACGGCCTGTGGACGTGCGACCTGTTTATGCGCCGCATGGTGACCGGCCGC 261967
|| || || || || |||| |||||| || ||| ||| | | || | ||
Sbjct 5389480 GACCTGTTCCTCGCGCTCTGGATCCCCGACCTCTTCATGAAGCGCGTCGAGAAGAACGGC 5389539
Query 261968 GACTGGTCGCTCTTTTGCCCGTCCGAGGCGCCCGGCCTGCACGAATGCTATGGCGCGGCC 262027
|||||| ||||| | ||||| |||| |||||||| ||| ||||| |||| |
Sbjct 5389540 GACTGGACGCTCATGTGCCCCAACGAGTGCCCCGGCCTCGCCGACTGCTACGGCGACGAG 5389599
Query 262028 TTTGACGCCCTCTATGAGNNNNNNNNNNNNNNNNNNNNNNCGCGGAC---CGTC-GTGCC 262083
|| || || || || || ||||| | | | || |
Sbjct 5389600 TTCGAGGCGCTGTACGA----AAAGTACGAGCGCGAGGGCCGCGGCCGCAAGACGGTCCG 5389655
Query 262084 CGCACGACAGATCTGGTCGGCCATTGTCGCGGCCCATATCGAGACCGGCACGCCCTACAT 262143
||| | || |||||| | || ||| |||||| | ||||| |||| |||| |||
Sbjct 5389656 CGCCCAGAAGCTCTGGTACTCGATCCTCGAGGCCCAGACGGAGACGGGCAACCCCTTCAT 5389715
Query 262144 GGTCTACAAGGACGCCGTCAACCTGACCAGCAACCAGCAGAACCTGGGCACCA-CGACAG 262202
| | ||||||||||| ||||| | ||||||||| ||||||| || || | | |||
Sbjct 5389716 GCTGTACAAGGACGCGTGCAACCGCAAGAGCAACCAGAAGAACCTCGGGACGATCCGCAG 5389775
Query 262203 AGGCCAACCTGTGCACCGAGATCGTCCAGTTTTCGTCGCCCACCGAGGCAAGTGTGTGCA 262262
|||||||||||||||||||| || ||| ||| ||||| ||||| || ||||
Sbjct 5389776 -CTCCAACCTGTGCACCGAGATCATCGAGTACTCGGCGCCCGACGAGGTGGCCGTCTGCA 5389834
Query 262263 ACCTCTCGAGCGTGGCCCTGCC 262284
||||| || | ||||||||
Sbjct 5389835 ACCTCGCGTCGCTCGCCCTGCC 5389856
Score = 141 bits (156), Expect = 1e-27
Identities = 211/296 (71%), Gaps = 5/296 (2%)
Strand=Plus/Minus
Query 1455775 GATATGGGAAATGTACCAAAAAGGCCGAGGCCTCCTTTTGGACCGCCGAGGAGGTCGACC 1455834
||| ||| |||||||| || ||||||||||| ||||| ||||| ||||| ||| |||| |
Sbjct 2599515 GATCTGGCAAATGTAC-AAGAAGGCCGAGGCGTCCTTCTGGACGGCCGAAGAGATCGATC 2599457
Query 1455835 TCGGCGCCGACACGGTCCACTGGGTGTCGC---TGAGCGACGACGAGCGCCATTTCATCA 1455891
| | || | | ||||| | ||| ||||| ||||| ||||| ||
Sbjct 2599456 TTTCCAAGGATTTGCACGACTGGAACAACCGTTTGAATGACGATGAGCGGTATTTCGTCT 2599397
Query 1455892 AGCACGTCCTCGCCTTTTTTCGCCGCCAGCGATGGCATCGTGGCCGAGAACCTGGCCGGC 1455951
|||| | ||||| ||| |||||||| || || ||||| ||||||||| | ||
Sbjct 2599396 CGCACATTCTCGC-TTTCTTCGCCGCTTCGGACGGAATCGTCAACGAGAACCTTGTCGAA 2599338
Query 1455952 CGCTTTATGAAAGAGGTCCAATTGCCAGAGGCACGTTTGTTTTACGGGTTCCAGATCGCC 1456011
|| || | ||||| ||| | || ||||| || | || ||||| ||||| |||
Sbjct 2599337 CGTTTCAGCGGCGAGGTGCAAATCCCCGAGGCTCGCTGCTTCTACGGTTTCCAAATCATG 2599278
Query 1456012 ATCGAAAACATCCACTCTGAAACCTACTCGCTCCTGATCGACACCTACGTCAAGGA 1456067
|| ||||| |||||||| || |||||||||||| |||||||| | ||| |||||||
Sbjct 2599277 ATGGAAAATATCCACTCCGAGACCTACTCGCTCTTGATCGACTCGTACATCAAGGA 2599222
Score = 95.1 bits (104), Expect = 2e-13
Identities = 148/210 (70%), Gaps = 4/210 (2%)
Strand=Plus/Plus
Query 262418 CGCAACCTCAATCGTGTGATTGACATTAATCACTACCCGGTGCCCGAGGCCCGCCACTCG 262477
||||||||||| || | || ||| | || |||||||| || | ||||| ||| ||
Sbjct 5389927 CGCAACCTCAACCGCATCATCGACGTCAACCACTACCCCGTCCAGGAGGCGCGCAACAGC 5389986
Query 262478 AATCTGCGCCATCGACCGATGGGCGTCGGCGTGCAGGGCCTCGCCGACGTGTTTGCCCTG 262537
|| | ||||| ||||| || ||||||||||| |||||||||||||||| || | |
Sbjct 5389987 AACTTCCGCCACCGACCCATCGGCGTCGGCGTCCAGGGCCTCGCCGACGCCTTCCTCGCG 5390046
Query 262538 ATGGACCTGCCGTGGGAGAGCGCC--GGCGCACGACGTCTCAACCGCGCCATCTTTGAGA 262595
|| | |||| | ||| | || ||||| ||| || ||| ||||| ||||
Sbjct 5390047 CTGCGCATGCCCTTCGAGTCCCCCGAGGCGCGCGA--GCTGAACAAGCAGATCTTCGAGA 5390104
Query 262596 CGGTCTACCATGCGGCGGCGACGGCGTCGG 262625
| ||||||| ||||| ||||| |||||
Sbjct 5390105 CCATCTACCACGCGGCCCTGACGGAGTCGG 5390134
Score = 87.8 bits (96), Expect = 3e-11
Identities = 173/251 (69%), Gaps = 4/251 (2%)
Strand=Plus/Minus
Query 1456523 ATCATCGTCGAGGCCGTCGAGATCGAGAAAGAGTTTGTCAGCGAGTCGCTGCCGGTGGCG 1456582
|||||| ||| |||||| || ||| | ||||| ||| |||| | || || ||
Sbjct 2598834 ATCATCACCGACGCCGTCACCATTGAGCAGGAGTTCCTCACCGAGGCCCTCCCATGTGCT 2598775
Query 1456583 CTCATCGGCATGAACGCCACCGCTCATGTGCCAGTACATTGAATTTTGTCGCCGACCGCC 1456642
|| |||||||||| |||||| | ||| |||||||| || || || ||||| || |
Sbjct 2598774 CTGCTCGGCATGAATGCCACCT-TGATGAAGCAGTACATCGAGTTC-GTTGCCGATCGTC 2598717
Query 1456643 TGCTCGCGGCGCTCGGCTGCGGAGAAGCACTACCGGACGGCCAACCCGTTCCCATGGATG 1456702
| || | || |||||| || ||||| ||| || | ||||| ||| | |||
Sbjct 2598716 TCCTTGTTGCTCTCGGCAACG-AGAAGGTGTACAAATCGTCGAACCCCTTCGACTTCATG 2598658
Query 1456703 GAGTTGATCTCGCTCGAGGGCAAGACCAACTTTTTCGAGCGCCGCG-TGGCGAGTACGCC 1456761
||| ||||| |||| ||||||||||| || |||||| || | || ||| ||
Sbjct 2598657 GAGAACATCTCCCTCGGTGGCAAGACCAATTTCTTCGAGAAACGTGTTGCCGACTATCAA 2598598
Query 1456762 AAGGCCGGCGT 1456772
|||||||||||
Sbjct 2598597 AAGGCCGGCGT 2598587
>seq2
Length=10204147
Score = 147 bits (162), Expect = 3e-29
Identities = 337/497 (68%), Gaps = 24/497 (5%)
Strand=Plus/Plus
Query 1600258 CTCCATCTCTCCAAGGCGGAAGCCGCCCGAGCGCGAGCGGCCCTCGACCGGCTGCTTGGT 1600317
|||||| ||||| | || | |||||| ||||| ||| ||||| ||||||||| | ||
Sbjct 7430175 CTCCATTTCTCCGAACCGCAGGCCGCCATCGCGCGCGCGACCCTCCACCGGCTGCCTCGT 7430234
Query 1600318 GAGCATCTGGACGGGGCCGCGTGGTCGGGCGTGAATCTTGTCGATGGCCACGTGGCGCAG 1600377
| ||||| || || || || | || ||||||||||||||| | ||| ||| |||||
Sbjct 7430235 CATGATCTGCACCGGCCCTCGGGCGCGCGCGTGAATCTTGTCGTCGACCATGTGCCGCAG 7430294
Query 1600378 GGCCTGGTAGTAGACCGGCGCCGTA-AAGATCAACGCCTCCATGGGCTCGC---CGGTGT 1600433
|||||||||| ||| |||| | |||| | ||| || ||| || | ||||
Sbjct 7430295 CCGCTGGTAGTAGGTCGG-GCCGAAGAAGACCTGCGCGCGCA---GCTTGCGACCCGTGT 7430350
Query 1600434 GCGGGTGGTAGAGCACCTCCTTGCCGTAGCGCTCGCATCCGTG---GCGAGCCAACTCGG 1600490
|| || ||| | | ||| |||| || | | ||||| ||| || ||| |
Sbjct 7430351 GCCCGTTGTACATGATCTCGAAGCCGCGAGACTGGTAGCCGTGCTTGCGCAGCAGCTCCG 7430410
Query 1600491 CGGCGACATCGTCGACGGTGACGCCGCCAAAGGGCGTGCCGTCGCCCACATAGCCCTCGC 1600550
| || |||||| || ||| || |||||||| | |||||| | |||||||
Sbjct 7430411 AG---ACCGAGTCGACCGTCACGTCGGTGAAGGGCGTCGCATCGCCCTCCATGCCCTCGA 7430467
Query 1600551 GGCAGGCCACCTTGCCCAGGAGGGCCTCCATCATCTTGCCCATGGTCATGCGCGACGGGA 1600610
| | || |||| ||||| ||| |||| | | | || ||||| |||||||| |
Sbjct 7430468 GCGTCGAAACTTTGCTGAGGAGACACTCGATCAGATGGGCAATCGTCATTCGCGACGGAA 7430527
Query 1600611 TGGCGTGCGGGTTGATCACAATGTCGGGCGTGGCACCGCCGCGAGGCGACCAGGGCATGT 1600670
| ||||| |||||||| | |||||||||||| | || | | ||| |||||||||
Sbjct 7430528 TCGCGTGAGGGTTGATGATGATGTCGGGCGTGACGCCCTCCC---GCGTGAAGGGCATGT 7430584
Query 1600671 CCTC--GGTGGAGCG-CACGCTGCCCACGGTGCCCTTTTGGCCGTGGCGCGACGACAGTT 1600727
|||| | || || ||| ||| | |||||||| || ||||| ||||| | | |
Sbjct 7430585 CCTCCTGCCGGTACGTCAC---GCCGATAGTGCCCTTCTGCCCGTGACGCGAGGCAAACT 7430641
Query 1600728 TGTCGCCCACCT-CGGG 1600743
||||||| | || ||||
Sbjct 7430642 TGTCGCCGATCTGCGGG 7430658
Score = 104 bits (114), Expect = 3e-16
Identities = 126/172 (73%), Gaps = 0/172 (0%)
Strand=Plus/Plus
Query 332874 AGCGCAGGATGGCACAACGGCTCTGCAGGGCCTCGATGACCATTGACGACGTGTTGCAGG 332933
|||| |||||||| || ||| ||||||| |||||||| | | || ||||||||
Sbjct 9482198 AGCGGAGGATGGCGCATCGGGATTGCAGGGGCTCGATGATCTTGTTGGATTGGTTGCAGG 9482257
Query 332934 CCAGGGCAAACCGCGTCGTATTGGTATGCTTTTCCATGGTCGACCGGAGGGCCTGTTGGG 332993
| | ||| ||||| ||||| |||| || | ||||| ||| ||||| ||||| ||||
Sbjct 9482258 CGAAGGCGAACCGAGTCGTGTTGGAATAAATCTCCATCGTCCTTCGGAGCGCCTGCTGGG 9482317
Query 332994 CCGCCGGCGTGAGGCAGTCGGCCTCGTCGAGGATGATGATCTTGTGGCGCCC 333045
| ||| || | || |||||| ||||||||||| | | |||||| | |||
Sbjct 9482318 CACCCGATGTCATGCTGTCGGCTTCGTCGAGGATCACCAGCTTGTGCCTCCC 9482369
>seq1
Length=12542233
Score = 87.8 bits (96), Expect = 3e-11
Identities = 110/147 (75%), Gaps = 12/147 (8%)
Strand=Plus/Minus
Query 2129723 GGCCGTCGACGGTGGTCACCATCTGGTGCACGGCGGCATAGGTCTCGATCGCCATCAGCC 2129782
|||||||||||| |||||||||||| ||||| || || ||||| ||| ||||
Sbjct 10486335 GGCCGTCGACGGCCGTCACCATCTGGAACACGGTCGCGTACTCCTCGA-CGCG--CAGCA 10486279
Query 2129783 GGCCGCGCGGCACGACGACGCTGCCGGGCGCGCAGCACACGC---TCAGGTCGTTGCGCA 2129839
|| | ||| ||| |||||||||| |||| ||| |||| ||||||| ||| |
Sbjct 10486278 GGTC---CGGGACGGTGACGCTGCCG---GCGCCGCAGACGCCGTAGAGGTCGTGGCGGA 10486225
Query 2129840 CCAGATCGACGATCATGAGGTTCTCGG 2129866
| |||||||| ||||| ||||||||||
Sbjct 10486224 CGAGATCGACAATCATCAGGTTCTCGG 10486198
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 7177808499348536
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