Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Drechmeria_20coniospora_20[genbank_20GCA_5F001625195.1_202016-04-24] 28 sequences; 32,831,003 total letters Query= NC_026440.1 Length=2243109 Score E Sequences producing significant alignments: (Bits) Value seq3 233 3e-55 seq2 147 3e-29 seq1 87.8 3e-11 >seq3 Length=9751215 Score = 233 bits (258), Expect = 3e-55 Identities = 359/507 (71%), Gaps = 19/507 (4%) Strand=Plus/Plus Query 259681 GCACAAGGAGGTCCTCGACGCTGCCATCTGCCACGGCCGAGACTTTGGCTACTCGTACTT 259740 ||||||||||| |||||| | |||||| | ||| ||| ||||| |||| |||||| Sbjct 5388879 GCACAAGGAGGAGCTCGACTCGGCCATCGTCTACGACCGCGACTTCAACTACCAGTACTT 5388938 Query 259741 TGGTCTGGCGAC-CTTGCGCCGGTCCTACCTGACCAAAGTGCGCGATATTGTCGTCGAGC 259799 ||| | ||| || | || | |||||||| ||| | || | ||||||||| Sbjct 5388939 TGGCTTCAAGACTCTCGAGC-GATCCTACCTCCTCAAGCTCAACGGCAAGATCGTCGAGC 5388997 Query 259800 GGCCCCAGTATATGCTCATGCGTGTCGCCCTTGGCCATTATGGGTTTGCCGACGTCGACA 259859 | || ||| | ||| ||||||| || | | ||| | |||| ||||| Sbjct 5388998 GACCGCAGCACATGATCATGCGCGTGTCGGTCGGCA--TCTGGGG----------CGACA 5389045 Query 259860 ATGCGCTGGAGCACGTGCTCGCCACCTACGAGGCCATGTCGCAGCA-GTTGTTCACCTCA 259918 | | |||| ||| ||| || ||| | ||||||| |||| | ||||||| Sbjct 5389046 ACA---TCGAGCGCGTCATCGAGACGTACAATCTCATGTCG-AGCAAGATGTTCACGCAC 5389101 Query 259919 GCGACGCCCACGCTCTTTAATGCCGGCACGCCGCGCCCGCAGAATTCGTCGTGCTTTCTG 259978 || |||| |||||||| || ||||||||||||| ||||| ||||||||||| || Sbjct 5389102 GCCTCGCCGACGCTCTTCAACGCCGGCACGCCGCAGGCGCAGCTGTCGTCGTGCTTCCTC 5389161 Query 259979 TTGGACATGAAGGCCGATTCGATCGAGGGCATCTATGACACGCTCAAGCAGTGCGCGCTC 260038 | |||||||||| ||| |||||||||||||| |||||||||||| |||||| | Sbjct 5389162 GTCGACATGAAGGACGACAGCATCGAGGGCATCTACGACACGCTCAAGACGTGCGCCATG 5389221 Query 260039 ATCTCCAAGGCGGCCGGCGGCATCGGTTTTGCCGCACACAAGGTGCGCGCCGCGGGCGCC 260098 ||||||||| ||||||||||||||| | | ||| | |||||| | || || Sbjct 5389222 ATCTCCAAGATGGCCGGCGGCATCGGCCTCAACATCCACCGCATCCGCGCCACCGGATCC 5389281 Query 260099 TACGTGGCGGGCACCAACGGCCAGTCCAACGGCCTTGTGCCCATGCTTCGCGTTTTTAAC 260158 ||| | || ||||||||||| ||||||||| | ||||||||||||||| || ||| Sbjct 5389282 TACATTGCCGGCACCAACGGTACCTCCAACGGCATCACGCCCATGCTTCGCGTCTTCAAC 5389341 Query 260159 GACACGGCGCGCTACGTCGACCAGTGC 260185 ||||||| || |||||||||||| || Sbjct 5389342 AACACGGCCCGGTACGTCGACCAGGGC 5389368 Score = 174 bits (192), Expect = 2e-37 Identities = 368/543 (68%), Gaps = 22/543 (4%) Strand=Plus/Plus Query 262879 TGGGACTGGGACGCACTGCGGGCGTCG-GTTCGAC-AGCATGGCCTGCGCAACTCGTTGC 262936 ||||| ||||| | ||||| || || | || | |||| ||| | |||||| ||| Sbjct 5390239 TGGGAGTGGGAGACGCTGCGCGC--CGAGATCAAGGAGCACGGCATCCGCAACAGCCTGC 5390296 Query 262937 TCGTGGCGCTCATGCCCACGGCCACGACGTCGCAGATCCTGGGCAACACCGAGGCGTTCG 262996 | | |||| ||||| ||||||| |||||||||||||||||||||| |||| |||| Sbjct 5390297 TGCTCGCGCCGATGCCGACGGCCAGCACGTCGCAGATCCTGGGCAACAACGAGTGCTTCG 5390356 Query 262997 AGGTCATCACGAGCAACATCTACACGCGCCGCGTGCTCTCGGGCGACTTTACCGTGGTCA 263056 || |||| |||||||||| ||||||||| ||| | ||||| ||| ||||||| Sbjct 5390357 AGCCGTACACGTCCAACATCTACCAGCGCCGCGTCCTCGCCGGCGAGTTTCAGGTGGTCA 5390416 Query 263057 ACCGCCACCTGGTCAAGCGCATGGTGGCGCGCGGCCTGTGGACGCCCGACTTTCGCGACC 263116 ||| | ||| ||||| | | || | || || ||| | || | ||| Sbjct 5390417 ACCCCTGGCTGCTCAAGGACCTCGTCGACATGGGACTCTGGTCCGACGCGATGAAGAACC 5390476 Query 263117 GGCTCATTGCGGCACAGGGCTCGGTGCAGGGCTTTGACGACGAGGAGGTGCCGCCCGATC 263176 | |||| |||| | || ||| | ||| | ||| | || | ||| |||| Sbjct 5390477 GCATCATCGCGGAGAACGGGTCGATCCAGAACATTGCCAAC------ATCCCGGCCGACA 5390530 Query 263177 TCAAGGCTCTCTTCAAGACCGTGTGGGAGGTGCCCAACCGGGTGACCATTGATATGGCGG 263236 ||||||| |||| |||||| || |||||| | | | ||| | | | ||||||| Sbjct 5390531 TCAAGGCCCTCTACAAGACGGTCTGGGAGATTTCGCAGCGGCAGGTGGTGCAGATGGCGG 5390590 Query 263237 CCGACCGCGCGCCCTATGTCGACCAGAGCCAGTCGCTCAACCTGTACCTCGCCGACCCGA 263296 ||||||||| ||| |||||||| ||||||||||||| | || | ||||||| Sbjct 5390591 CCGACCGCGGCGCCTTCATCGACCAGTCCCAGTCGCTCAACATTCACATGAAGGACCCGA 5390650 Query 263297 C---GGCCGAGAGCATCACGTCGATGCAC---GCCTATGCGTGGCGTCGCGGCCTCAAGA 263350 | || | || |||||| |||||| ||| | ||| | ||||||||||| Sbjct 5390651 CCATGGGCAAG---ATCACGAGCATGCACTTTGCC---GGCTGGAAGCTCGGCCTCAAGA 5390704 Query 263351 CTGGCATGTACTATCTGCGCACCCGGCCCGCTGCCAACGCCATTCAATTCACCGTCGATC 263410 | ||||||||||| ||||| || | |||| ||| |||| || ||||||||||| | Sbjct 5390705 CGGGCATGTACTACCTGCGGACGCAAGCCGCCGCCGCGCCCATCCAGTTCACCGTCGACC 5390764 Query 263411 AGG 263413 ||| Sbjct 5390765 AGG 5390767 Score = 152 bits (168), Expect = 7e-31 Identities = 335/502 (67%), Gaps = 16/502 (3%) Strand=Plus/Plus Query 261788 GGCGGCGGCAAGCGCAAGGGCGCCTTTGCCTGCTACCTGGAACCGTGGCACGCCGACCTC 261847 |||||| |||||| ||||||||| ||| ||||||||||||||||||||||||| | Sbjct 5389366 GGCGGCAACAAGCGGCCGGGCGCCTTCGCCATCTACCTGGAACCGTGGCACGCCGACGTT 5389425 Query 261848 ATCAACTGGCTGGACCTCAAAAAGAACCACGGCAAGGGAGGGGGAGAACCGGGCGCGCGC 261907 | | | || ||||| |||||||||||||| ||||| || | |||||||| Sbjct 5389426 TTTGAGTTTCTCGACCTGCGCAAGAACCACGGCAA-GGAGGAGG-----TGCGCGCGCGC 5389479 Query 261908 GATCTCTTTTACGGCCTGTGGACGTGCGACCTGTTTATGCGCCGCATGGTGACCGGCCGC 261967 || || || || || |||| |||||| || ||| ||| | | || | || Sbjct 5389480 GACCTGTTCCTCGCGCTCTGGATCCCCGACCTCTTCATGAAGCGCGTCGAGAAGAACGGC 5389539 Query 261968 GACTGGTCGCTCTTTTGCCCGTCCGAGGCGCCCGGCCTGCACGAATGCTATGGCGCGGCC 262027 |||||| ||||| | ||||| |||| |||||||| ||| ||||| |||| | Sbjct 5389540 GACTGGACGCTCATGTGCCCCAACGAGTGCCCCGGCCTCGCCGACTGCTACGGCGACGAG 5389599 Query 262028 TTTGACGCCCTCTATGAGNNNNNNNNNNNNNNNNNNNNNNCGCGGAC---CGTC-GTGCC 262083 || || || || || || ||||| | | | || | Sbjct 5389600 TTCGAGGCGCTGTACGA----AAAGTACGAGCGCGAGGGCCGCGGCCGCAAGACGGTCCG 5389655 Query 262084 CGCACGACAGATCTGGTCGGCCATTGTCGCGGCCCATATCGAGACCGGCACGCCCTACAT 262143 ||| | || |||||| | || ||| |||||| | ||||| |||| |||| ||| Sbjct 5389656 CGCCCAGAAGCTCTGGTACTCGATCCTCGAGGCCCAGACGGAGACGGGCAACCCCTTCAT 5389715 Query 262144 GGTCTACAAGGACGCCGTCAACCTGACCAGCAACCAGCAGAACCTGGGCACCA-CGACAG 262202 | | ||||||||||| ||||| | ||||||||| ||||||| || || | | ||| Sbjct 5389716 GCTGTACAAGGACGCGTGCAACCGCAAGAGCAACCAGAAGAACCTCGGGACGATCCGCAG 5389775 Query 262203 AGGCCAACCTGTGCACCGAGATCGTCCAGTTTTCGTCGCCCACCGAGGCAAGTGTGTGCA 262262 |||||||||||||||||||| || ||| ||| ||||| ||||| || |||| Sbjct 5389776 -CTCCAACCTGTGCACCGAGATCATCGAGTACTCGGCGCCCGACGAGGTGGCCGTCTGCA 5389834 Query 262263 ACCTCTCGAGCGTGGCCCTGCC 262284 ||||| || | |||||||| Sbjct 5389835 ACCTCGCGTCGCTCGCCCTGCC 5389856 Score = 141 bits (156), Expect = 1e-27 Identities = 211/296 (71%), Gaps = 5/296 (2%) Strand=Plus/Minus Query 1455775 GATATGGGAAATGTACCAAAAAGGCCGAGGCCTCCTTTTGGACCGCCGAGGAGGTCGACC 1455834 ||| ||| |||||||| || ||||||||||| ||||| ||||| ||||| ||| |||| | Sbjct 2599515 GATCTGGCAAATGTAC-AAGAAGGCCGAGGCGTCCTTCTGGACGGCCGAAGAGATCGATC 2599457 Query 1455835 TCGGCGCCGACACGGTCCACTGGGTGTCGC---TGAGCGACGACGAGCGCCATTTCATCA 1455891 | | || | | ||||| | ||| ||||| ||||| ||||| || Sbjct 2599456 TTTCCAAGGATTTGCACGACTGGAACAACCGTTTGAATGACGATGAGCGGTATTTCGTCT 2599397 Query 1455892 AGCACGTCCTCGCCTTTTTTCGCCGCCAGCGATGGCATCGTGGCCGAGAACCTGGCCGGC 1455951 |||| | ||||| ||| |||||||| || || ||||| ||||||||| | || Sbjct 2599396 CGCACATTCTCGC-TTTCTTCGCCGCTTCGGACGGAATCGTCAACGAGAACCTTGTCGAA 2599338 Query 1455952 CGCTTTATGAAAGAGGTCCAATTGCCAGAGGCACGTTTGTTTTACGGGTTCCAGATCGCC 1456011 || || | ||||| ||| | || ||||| || | || ||||| ||||| ||| Sbjct 2599337 CGTTTCAGCGGCGAGGTGCAAATCCCCGAGGCTCGCTGCTTCTACGGTTTCCAAATCATG 2599278 Query 1456012 ATCGAAAACATCCACTCTGAAACCTACTCGCTCCTGATCGACACCTACGTCAAGGA 1456067 || ||||| |||||||| || |||||||||||| |||||||| | ||| ||||||| Sbjct 2599277 ATGGAAAATATCCACTCCGAGACCTACTCGCTCTTGATCGACTCGTACATCAAGGA 2599222 Score = 95.1 bits (104), Expect = 2e-13 Identities = 148/210 (70%), Gaps = 4/210 (2%) Strand=Plus/Plus Query 262418 CGCAACCTCAATCGTGTGATTGACATTAATCACTACCCGGTGCCCGAGGCCCGCCACTCG 262477 ||||||||||| || | || ||| | || |||||||| || | ||||| ||| || Sbjct 5389927 CGCAACCTCAACCGCATCATCGACGTCAACCACTACCCCGTCCAGGAGGCGCGCAACAGC 5389986 Query 262478 AATCTGCGCCATCGACCGATGGGCGTCGGCGTGCAGGGCCTCGCCGACGTGTTTGCCCTG 262537 || | ||||| ||||| || ||||||||||| |||||||||||||||| || | | Sbjct 5389987 AACTTCCGCCACCGACCCATCGGCGTCGGCGTCCAGGGCCTCGCCGACGCCTTCCTCGCG 5390046 Query 262538 ATGGACCTGCCGTGGGAGAGCGCC--GGCGCACGACGTCTCAACCGCGCCATCTTTGAGA 262595 || | |||| | ||| | || ||||| ||| || ||| ||||| |||| Sbjct 5390047 CTGCGCATGCCCTTCGAGTCCCCCGAGGCGCGCGA--GCTGAACAAGCAGATCTTCGAGA 5390104 Query 262596 CGGTCTACCATGCGGCGGCGACGGCGTCGG 262625 | ||||||| ||||| ||||| ||||| Sbjct 5390105 CCATCTACCACGCGGCCCTGACGGAGTCGG 5390134 Score = 87.8 bits (96), Expect = 3e-11 Identities = 173/251 (69%), Gaps = 4/251 (2%) Strand=Plus/Minus Query 1456523 ATCATCGTCGAGGCCGTCGAGATCGAGAAAGAGTTTGTCAGCGAGTCGCTGCCGGTGGCG 1456582 |||||| ||| |||||| || ||| | ||||| ||| |||| | || || || Sbjct 2598834 ATCATCACCGACGCCGTCACCATTGAGCAGGAGTTCCTCACCGAGGCCCTCCCATGTGCT 2598775 Query 1456583 CTCATCGGCATGAACGCCACCGCTCATGTGCCAGTACATTGAATTTTGTCGCCGACCGCC 1456642 || |||||||||| |||||| | ||| |||||||| || || || ||||| || | Sbjct 2598774 CTGCTCGGCATGAATGCCACCT-TGATGAAGCAGTACATCGAGTTC-GTTGCCGATCGTC 2598717 Query 1456643 TGCTCGCGGCGCTCGGCTGCGGAGAAGCACTACCGGACGGCCAACCCGTTCCCATGGATG 1456702 | || | || |||||| || ||||| ||| || | ||||| ||| | ||| Sbjct 2598716 TCCTTGTTGCTCTCGGCAACG-AGAAGGTGTACAAATCGTCGAACCCCTTCGACTTCATG 2598658 Query 1456703 GAGTTGATCTCGCTCGAGGGCAAGACCAACTTTTTCGAGCGCCGCG-TGGCGAGTACGCC 1456761 ||| ||||| |||| ||||||||||| || |||||| || | || ||| || Sbjct 2598657 GAGAACATCTCCCTCGGTGGCAAGACCAATTTCTTCGAGAAACGTGTTGCCGACTATCAA 2598598 Query 1456762 AAGGCCGGCGT 1456772 ||||||||||| Sbjct 2598597 AAGGCCGGCGT 2598587 >seq2 Length=10204147 Score = 147 bits (162), Expect = 3e-29 Identities = 337/497 (68%), Gaps = 24/497 (5%) Strand=Plus/Plus Query 1600258 CTCCATCTCTCCAAGGCGGAAGCCGCCCGAGCGCGAGCGGCCCTCGACCGGCTGCTTGGT 1600317 |||||| ||||| | || | |||||| ||||| ||| ||||| ||||||||| | || Sbjct 7430175 CTCCATTTCTCCGAACCGCAGGCCGCCATCGCGCGCGCGACCCTCCACCGGCTGCCTCGT 7430234 Query 1600318 GAGCATCTGGACGGGGCCGCGTGGTCGGGCGTGAATCTTGTCGATGGCCACGTGGCGCAG 1600377 | ||||| || || || || | || ||||||||||||||| | ||| ||| ||||| Sbjct 7430235 CATGATCTGCACCGGCCCTCGGGCGCGCGCGTGAATCTTGTCGTCGACCATGTGCCGCAG 7430294 Query 1600378 GGCCTGGTAGTAGACCGGCGCCGTA-AAGATCAACGCCTCCATGGGCTCGC---CGGTGT 1600433 |||||||||| ||| |||| | |||| | ||| || ||| || | |||| Sbjct 7430295 CCGCTGGTAGTAGGTCGG-GCCGAAGAAGACCTGCGCGCGCA---GCTTGCGACCCGTGT 7430350 Query 1600434 GCGGGTGGTAGAGCACCTCCTTGCCGTAGCGCTCGCATCCGTG---GCGAGCCAACTCGG 1600490 || || ||| | | ||| |||| || | | ||||| ||| || ||| | Sbjct 7430351 GCCCGTTGTACATGATCTCGAAGCCGCGAGACTGGTAGCCGTGCTTGCGCAGCAGCTCCG 7430410 Query 1600491 CGGCGACATCGTCGACGGTGACGCCGCCAAAGGGCGTGCCGTCGCCCACATAGCCCTCGC 1600550 | || |||||| || ||| || |||||||| | |||||| | ||||||| Sbjct 7430411 AG---ACCGAGTCGACCGTCACGTCGGTGAAGGGCGTCGCATCGCCCTCCATGCCCTCGA 7430467 Query 1600551 GGCAGGCCACCTTGCCCAGGAGGGCCTCCATCATCTTGCCCATGGTCATGCGCGACGGGA 1600610 | | || |||| ||||| ||| |||| | | | || ||||| |||||||| | Sbjct 7430468 GCGTCGAAACTTTGCTGAGGAGACACTCGATCAGATGGGCAATCGTCATTCGCGACGGAA 7430527 Query 1600611 TGGCGTGCGGGTTGATCACAATGTCGGGCGTGGCACCGCCGCGAGGCGACCAGGGCATGT 1600670 | ||||| |||||||| | |||||||||||| | || | | ||| ||||||||| Sbjct 7430528 TCGCGTGAGGGTTGATGATGATGTCGGGCGTGACGCCCTCCC---GCGTGAAGGGCATGT 7430584 Query 1600671 CCTC--GGTGGAGCG-CACGCTGCCCACGGTGCCCTTTTGGCCGTGGCGCGACGACAGTT 1600727 |||| | || || ||| ||| | |||||||| || ||||| ||||| | | | Sbjct 7430585 CCTCCTGCCGGTACGTCAC---GCCGATAGTGCCCTTCTGCCCGTGACGCGAGGCAAACT 7430641 Query 1600728 TGTCGCCCACCT-CGGG 1600743 ||||||| | || |||| Sbjct 7430642 TGTCGCCGATCTGCGGG 7430658 Score = 104 bits (114), Expect = 3e-16 Identities = 126/172 (73%), Gaps = 0/172 (0%) Strand=Plus/Plus Query 332874 AGCGCAGGATGGCACAACGGCTCTGCAGGGCCTCGATGACCATTGACGACGTGTTGCAGG 332933 |||| |||||||| || ||| ||||||| |||||||| | | || |||||||| Sbjct 9482198 AGCGGAGGATGGCGCATCGGGATTGCAGGGGCTCGATGATCTTGTTGGATTGGTTGCAGG 9482257 Query 332934 CCAGGGCAAACCGCGTCGTATTGGTATGCTTTTCCATGGTCGACCGGAGGGCCTGTTGGG 332993 | | ||| ||||| ||||| |||| || | ||||| ||| ||||| ||||| |||| Sbjct 9482258 CGAAGGCGAACCGAGTCGTGTTGGAATAAATCTCCATCGTCCTTCGGAGCGCCTGCTGGG 9482317 Query 332994 CCGCCGGCGTGAGGCAGTCGGCCTCGTCGAGGATGATGATCTTGTGGCGCCC 333045 | ||| || | || |||||| ||||||||||| | | |||||| | ||| Sbjct 9482318 CACCCGATGTCATGCTGTCGGCTTCGTCGAGGATCACCAGCTTGTGCCTCCC 9482369 >seq1 Length=12542233 Score = 87.8 bits (96), Expect = 3e-11 Identities = 110/147 (75%), Gaps = 12/147 (8%) Strand=Plus/Minus Query 2129723 GGCCGTCGACGGTGGTCACCATCTGGTGCACGGCGGCATAGGTCTCGATCGCCATCAGCC 2129782 |||||||||||| |||||||||||| ||||| || || ||||| ||| |||| Sbjct 10486335 GGCCGTCGACGGCCGTCACCATCTGGAACACGGTCGCGTACTCCTCGA-CGCG--CAGCA 10486279 Query 2129783 GGCCGCGCGGCACGACGACGCTGCCGGGCGCGCAGCACACGC---TCAGGTCGTTGCGCA 2129839 || | ||| ||| |||||||||| |||| ||| |||| ||||||| ||| | Sbjct 10486278 GGTC---CGGGACGGTGACGCTGCCG---GCGCCGCAGACGCCGTAGAGGTCGTGGCGGA 10486225 Query 2129840 CCAGATCGACGATCATGAGGTTCTCGG 2129866 | |||||||| ||||| |||||||||| Sbjct 10486224 CGAGATCGACAATCATCAGGTTCTCGG 10486198 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 7177808499348536