Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Drechmeria_20coniospora_20[genbank_20GCA_5F001625195.1_202016-04-24]
28 sequences; 32,831,003 total letters
Query= NC_027213.1
Length=214699
Score E
Sequences producing significant alignments: (Bits) Value
seq3 96.9 5e-15
>seq3
Length=9751215
Score = 96.9 bits (106), Expect = 5e-15
Identities = 124/168 (74%), Gaps = 5/168 (3%)
Strand=Plus/Plus
Query 39659 TCGTTAGAAAATGTGAGTCCAGGCATTAGACCACGCTTTTTGAGCCAAAATATGGCAGCA 39718
||||| || ||||| || |||||||| ||||| ||||| || ||||| || || | ||
Sbjct 2598929 TCGTTGGAGAATGTCAGACCAGGCATGAGACCGCGCTTCTTCAGCCAGAAGATTGAGGCG 2598988
Query 39719 AAAGATCCAGAAAAGAAGATGCCTTCTACTGCTGCAAATGCAACAAGTCTCTCTCCGTAA 39778
|||| || |||||||||||||| || || ||||| ||||||||||| | || ||
Sbjct 2598989 AAAGCACCGCTGAAGAAGATGCCTTCGACGGCGGCAAAGGCAACAAGTCTTTGGGCG-AA 2599047
Query 39779 CTTGTA-TCATT---ATGTATCCACTTCTGTGCCCAATCAGCTTTCTT 39822
| || | || || || ||||| | | ||||||||||| |||||
Sbjct 2599048 CGTGGACTCCTTGTCTTGGATCCAACGCAGGGCCCAATCAGCCTTCTT 2599095
Score = 86.0 bits (94), Expect = 9e-12
Identities = 348/540 (64%), Gaps = 14/540 (3%)
Strand=Plus/Minus
Query 69679 AGATCGAGAAACTCCATAATATCAGAATGCCATGGTTCTAGATATATCGCCATGACTCCC 69738
|| ||||||||||| | || || | ||||| ||||| || || || || | | | |||
Sbjct 5389442 AGGTCGAGAAACTCAAAAACGTCGGCGTGCCACGGTTCCAGGTAGATGGCGAAGGCGCCC 5389383
Query 69739 GGTCGTTTATTTCCTCCCTGATCTATGTATCTGGCAGTGTTATTATAGACTCTCAGCATC 69798
|| || || || || ||||| || | ||| | ||| ||||| || |||| | |||||
Sbjct 5389382 GGCCGCTTGTTGCCGCCCTGGTCGACGTACCGGGCCGTGTTGTTGAAGACGCGAAGCATG 5389323
Query 69799 GGAATAATACCATTAGATTTACCATTTGTTCCAGAAATATAACTTCCTCTTGCGCGAATA 69858
|| | || || || || |||| || || || | ||| || ||| | ||||| ||
Sbjct 5389322 GGCGTGATGCCGTTGGAGGTACCGTTGGTGCCGGCAATGTAGGATCCGGTGGCGCGGATG 5389263
Query 69859 TTACTAATAGATAGACCTATTCCTCCTGCCATTTTAGAGATTAGAGCACAACGT-TTCAA 69917
|| || || || || || ||||| || ||||| | || | |||| || |
Sbjct 5389262 CGGTGGATGTTGAGGCCGATGCCGCCGGCCATCTTGGAGATCATGGCGC-ACGTCTTGAG 5389204
Query 69918 TGTGTCATATATACCCTCTATGCTATCATCTATCATGTTAAGAAGAAAACAGCTAGACAT 69977
||||| || || ||||| ||||| || || |||||| | || || || ||||
Sbjct 5389203 CGTGTCGTAGATGCCCTCGATGCTGTCGTCCTTCATGTCGACGAGGAAGCACGACGACAG 5389144
Query 69978 TTGATGATGTATAGTTCCCGCATTAAATAATGTAGGAGATGCGTGAGTGAACCATTTTTC 70037
|| || || || || || || | || || || ||||| ||||| ||| || |
Sbjct 5389143 CTGCGCCTGCGGCGTGCCGGCGTTGAAGAGCGTCGGCGAGGCGTGCGTGAA-CATCTTGC 5389085
Query 70038 -AGAAAGCAGATTGTATGTTTCAAT----AGCT-GATTCTATATCCCACTGATGAATTCC 70091
|| | |||||||| || || || ||| ||| | | ||| | |||| ||
Sbjct 5389084 TCGACATGAGATTGTACGTCTCGATGACGCGCTCGATGTTGTCGCCC-CAGATG----CC 5389030
Query 70092 TATCGCGACACGCATCAACATATGCTGAGGTCGTTCTACCGTTTTATTATTTATTTTCAA 70151
| || || ||||| | ||| ||||| ||||| || || | || || | || |
Sbjct 5389029 GACCGACACGCGCATGATCATGTGCTGCGGTCGCTCGACGATCTTGCCGTTGAGCTTGAG 5388970
Query 70152 CAGGTATGATTTTTCCAGAGTTTTAAACCCAAAATAGTTGTATGAAAAGTCTCTTTCGTA 70211
||||| ||| || ||||| || || ||||| || | ||| ||||| | |||||
Sbjct 5388969 GAGGTAGGATCGCTCGAGAGTCTTGAAGCCAAAGTACTGGTAGTTGAAGTCGCGGTCGTA 5388910
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 686908559581920
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |