Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Drechmeria_20coniospora_20[genbank_20GCA_5F001625195.1_202016-04-24] 28 sequences; 32,831,003 total letters Query= NC_027213.1 Length=214699 Score E Sequences producing significant alignments: (Bits) Value seq3 96.9 5e-15 >seq3 Length=9751215 Score = 96.9 bits (106), Expect = 5e-15 Identities = 124/168 (74%), Gaps = 5/168 (3%) Strand=Plus/Plus Query 39659 TCGTTAGAAAATGTGAGTCCAGGCATTAGACCACGCTTTTTGAGCCAAAATATGGCAGCA 39718 ||||| || ||||| || |||||||| ||||| ||||| || ||||| || || | || Sbjct 2598929 TCGTTGGAGAATGTCAGACCAGGCATGAGACCGCGCTTCTTCAGCCAGAAGATTGAGGCG 2598988 Query 39719 AAAGATCCAGAAAAGAAGATGCCTTCTACTGCTGCAAATGCAACAAGTCTCTCTCCGTAA 39778 |||| || |||||||||||||| || || ||||| ||||||||||| | || || Sbjct 2598989 AAAGCACCGCTGAAGAAGATGCCTTCGACGGCGGCAAAGGCAACAAGTCTTTGGGCG-AA 2599047 Query 39779 CTTGTA-TCATT---ATGTATCCACTTCTGTGCCCAATCAGCTTTCTT 39822 | || | || || || ||||| | | ||||||||||| ||||| Sbjct 2599048 CGTGGACTCCTTGTCTTGGATCCAACGCAGGGCCCAATCAGCCTTCTT 2599095 Score = 86.0 bits (94), Expect = 9e-12 Identities = 348/540 (64%), Gaps = 14/540 (3%) Strand=Plus/Minus Query 69679 AGATCGAGAAACTCCATAATATCAGAATGCCATGGTTCTAGATATATCGCCATGACTCCC 69738 || ||||||||||| | || || | ||||| ||||| || || || || | | | ||| Sbjct 5389442 AGGTCGAGAAACTCAAAAACGTCGGCGTGCCACGGTTCCAGGTAGATGGCGAAGGCGCCC 5389383 Query 69739 GGTCGTTTATTTCCTCCCTGATCTATGTATCTGGCAGTGTTATTATAGACTCTCAGCATC 69798 || || || || || ||||| || | ||| | ||| ||||| || |||| | ||||| Sbjct 5389382 GGCCGCTTGTTGCCGCCCTGGTCGACGTACCGGGCCGTGTTGTTGAAGACGCGAAGCATG 5389323 Query 69799 GGAATAATACCATTAGATTTACCATTTGTTCCAGAAATATAACTTCCTCTTGCGCGAATA 69858 || | || || || || |||| || || || | ||| || ||| | ||||| || Sbjct 5389322 GGCGTGATGCCGTTGGAGGTACCGTTGGTGCCGGCAATGTAGGATCCGGTGGCGCGGATG 5389263 Query 69859 TTACTAATAGATAGACCTATTCCTCCTGCCATTTTAGAGATTAGAGCACAACGT-TTCAA 69917 || || || || || || ||||| || ||||| | || | |||| || | Sbjct 5389262 CGGTGGATGTTGAGGCCGATGCCGCCGGCCATCTTGGAGATCATGGCGC-ACGTCTTGAG 5389204 Query 69918 TGTGTCATATATACCCTCTATGCTATCATCTATCATGTTAAGAAGAAAACAGCTAGACAT 69977 ||||| || || ||||| ||||| || || |||||| | || || || |||| Sbjct 5389203 CGTGTCGTAGATGCCCTCGATGCTGTCGTCCTTCATGTCGACGAGGAAGCACGACGACAG 5389144 Query 69978 TTGATGATGTATAGTTCCCGCATTAAATAATGTAGGAGATGCGTGAGTGAACCATTTTTC 70037 || || || || || || || | || || || ||||| ||||| ||| || | Sbjct 5389143 CTGCGCCTGCGGCGTGCCGGCGTTGAAGAGCGTCGGCGAGGCGTGCGTGAA-CATCTTGC 5389085 Query 70038 -AGAAAGCAGATTGTATGTTTCAAT----AGCT-GATTCTATATCCCACTGATGAATTCC 70091 || | |||||||| || || || ||| ||| | | ||| | |||| || Sbjct 5389084 TCGACATGAGATTGTACGTCTCGATGACGCGCTCGATGTTGTCGCCC-CAGATG----CC 5389030 Query 70092 TATCGCGACACGCATCAACATATGCTGAGGTCGTTCTACCGTTTTATTATTTATTTTCAA 70151 | || || ||||| | ||| ||||| ||||| || || | || || | || | Sbjct 5389029 GACCGACACGCGCATGATCATGTGCTGCGGTCGCTCGACGATCTTGCCGTTGAGCTTGAG 5388970 Query 70152 CAGGTATGATTTTTCCAGAGTTTTAAACCCAAAATAGTTGTATGAAAAGTCTCTTTCGTA 70211 ||||| ||| || ||||| || || ||||| || | ||| ||||| | ||||| Sbjct 5388969 GAGGTAGGATCGCTCGAGAGTCTTGAAGCCAAAGTACTGGTAGTTGAAGTCGCGGTCGTA 5388910 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 686908559581920