Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Drechmeria_20coniospora_20[genbank_20GCA_5F001625195.1_202016-04-24] 28 sequences; 32,831,003 total letters Query= NC_027925.1 Length=496396 Score E Sequences producing significant alignments: (Bits) Value seq3 161 3e-34 >seq3 Length=9751215 Score = 161 bits (178), Expect = 3e-34 Identities = 366/539 (68%), Gaps = 10/539 (2%) Strand=Plus/Plus Query 254971 CGGCATTATACCAATGATCCGTGTGTTCAACAACGTGGCTCGCTACGTCGATCAAGGGGG 255030 |||||| | || ||| | || || ||||||||| ||| || |||||||| || || || Sbjct 5389311 CGGCATCACGCCCATGCTTCGCGTCTTCAACAACACGGCCCGGTACGTCGACCAGGGCGG 5389370 Query 255031 CGGCAAACGCCCAGGAGCGTTCACCATCTACCTGGAGCCGTGGCACGCCGACATTGAACG 255090 | ||| || || || || ||| ||||||||||||| ||||||||||||||| || Sbjct 5389371 CAACAAGCGGCCGGGCGCCTTCGCCATCTACCTGGAACCGTGGCACGCCGACGTTTTTGA 5389430 Query 255091 GTTTTTACTGCTGTCCGACAAGACCGGCACCGAGGAGCTGATCGCCCGCGACATCTACAC 255150 |||| | ||| | | || ||||| |||||| || ||| |||||| | | | Sbjct 5389431 GTTTCTCGACCTGCGCAAGAACCACGGCAAGGAGGAGGTGCGCGCGCGCGACCTGTTCCT 5389490 Query 255151 CGCTGTCTGGTGCTGCGATCTGTTTATGCGACGCGTGGA-ACGAGACGAGACCTGGAGCC 255209 ||| ||||| | ||| || || ||| ||||| || | || ||| ||||| | Sbjct 5389491 CGCGCTCTGGATCCCCGACCTCTTCATGAAGCGCGTCGAGAAGA-ACGGCGACTGGACGC 5389549 Query 255210 TCATGTGTCCCAACTTATCGCCCGGTCTAGTCGACTCTTGGGGTGACGAGTTTGAAAAAC 255269 ||||||| |||||| | ||||| || | ||||| | || |||||||| || | Sbjct 5389550 TCATGTGCCCCAACGAGTGCCCCGGCCTCGCCGACTGCTACGGCGACGAGTTCGAGGCGC 5389609 Query 255270 TGTATCTGGAGTACGAGCGTGCCGGCCG-GTTCGTACGCCAAGTGCCCGCGAAGAAGATC 255328 |||| |||||||||| | ||||| | || | | | || | ||| ||||| || Sbjct 5389610 TGTACGAAAAGTACGAGCGCGAGGGCCGCGGCCGCAAGAC-GGTCCGCGCCCAGAAGCTC 5389668 Query 255329 TGGAACACGATGGTGCGCATG--CAGCTGGAAACCGGAATGCCGTTCCTATTGCACAAAG 255386 ||| || |||| | || | | ||| ||| || || | || ||| | || |||| | Sbjct 5389669 TGGTACTCGATCCT-CG-AGGCCCAGACGGAGACGGGCAACCCCTTCATGCTGTACAAGG 5389726 Query 255387 AC-CACATAAACGCACGGTCGAACCAACGCCACCGCGGTACGATACGCGGCTCGAACCTG 255445 || | || |||| | | ||||| ||| ||| ||||| ||| |||| |||||| Sbjct 5389727 ACGCGTGCAACCGCAAGAGC-AACCAGAAGAACCTCGGGACGATCCGCAGCTCCAACCTG 5389785 Query 255446 TGCACCGAGATTACGTTGCACACGTCAGCGCAAGAGGTGGCCGTTTGCAACTTGGCGTC 255504 ||||||||||| | | || || | | | ||||||||||| |||||| | ||||| Sbjct 5389786 TGCACCGAGATCATCGAGTACTCGGCGCCCGACGAGGTGGCCGTCTGCAACCTCGCGTC 5389844 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1588335430184460