Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Drechmeria_20coniospora_20[genbank_20GCA_5F001625195.1_202016-04-24] 28 sequences; 32,831,003 total letters Query= NC_028093.1 Length=182309 Score E Sequences producing significant alignments: (Bits) Value seq3 156 5e-33 seq2 86.0 7e-12 >seq3 Length=9751215 Score = 156 bits (172), Expect = 5e-33 Identities = 947/1504 (63%), Gaps = 49/1504 (3%) Strand=Plus/Plus Query 104222 CCACAGTACATGTTCATGCGCGTGGCCATCGGTATTCATGGGGAAGACATTGATTCTGTC 104281 || ||| ||||| ||||||||||| | |||| || || || |||| || ||| Sbjct 5389000 CCGCAGCACATGATCATGCGCGTGTCGGTCGGCATCTGGGGCGACAACATCGAGCGCGTC 5389059 Query 104282 TTGGAGACATACGACAAGATGTCC--CAAGGTATGTTCATTCACGCAACACCAACCCTCT 104339 | ||||| ||| | ||||| |||| ||||||| ||||| | || || |||| Sbjct 5389060 ATCGAGACGTACAATCTCATGTCGAGCAAG--ATGTTCACGCACGCCTCGCCGACGCTCT 5389117 Query 104340 TCAATGCTGGTACACCAAGACCCCAAATGTCCAGTTGCTTCCTTATCGCCAACAAGGAGG 104399 |||| || || || || | || |||| |||||||| ||| || ||||| | Sbjct 5389118 TCAACGCCGGCACGCCGCAGGCGCAGCTGTCGTCGTGCTTCCTCGTCGACATGAAGGACG 5389177 Query 104400 ACTCAATCAACGGTATCTATGGAACTCTTACGGAGTGTGCGCAAATCTCAAAGTGGGCTG 104459 || ||| | || ||||| | || || | | ||| || ||||| ||| ||| | Sbjct 5389178 ACAGCATCGAGGGCATCTACGACACGCTCAAGACGTGCGCCATGATCTCCAAGATGGCCG 5389237 Query 104460 GGGGTATTGGGATGCACATCCATGATGTGAGAGCCAATAAATCTCGTATTCGGGGGACAA 104519 | || || || | ||||||| | | |||| ||| ||| || || | Sbjct 5389238 GCGGCATCGGCCTCAACATCCACCGCATCCGCGCCACCGGATCCTACATTGCCGGCACCA 5389297 Query 104520 ATGGTCAATCAGATGGTATTATTCCAATGCTTCGCGTATTTAACGCCACAGCGCGCTATG 104579 | ||| || | || || | || ||||||||||| || ||| ||| || || || | Sbjct 5389298 ACGGTACCTCCAACGGCATCACGCCCATGCTTCGCGTCTTCAACAACACGGCCCGGTACG 5389357 Query 104580 TAAATCAAGCTGGGCGTCGAAA-------GGGATCTATCGCAGTCTATCTTGAGCCATGG 104632 | | || ||||| | | | ||| | |||| |||| || || || ||| Sbjct 5389358 TCGACCA----GGGCGGCAACAAGCGGCCGGGCGCCTTCGCCATCTACCTGGAACCGTGG 5389413 Query 104633 CACGCGGATATCATGGAGTTCCTTGAGTTGCGTCTCAACCAAGGTGACGAGGAGGCGCGG 104692 ||||| || | | ||||| || || |||| ||||| || | ||||||| ||| Sbjct 5389414 CACGCCGACGTTTTTGAGTTTCTCGACCTGCGCAAGAACCACGGCAAGGAGGAGGTGCGC 5389473 Query 104693 TGCCGCGATCTCTTCTCCGCTCTCTGGATTCCAGATCTCTTCATGAAGAGAGTTGAGGAG 104752 ||||| || ||| ||| |||||||| || || |||||||||||| | || ||| || Sbjct 5389474 GCGCGCGACCTGTTCCTCGCGCTCTGGATCCCCGACCTCTTCATGAAGCGCGTCGAGAAG 5389533 Query 104753 AGTGGCAATTGGTCTCTCTTTTGTCCAGACAAGGCACCTGGTCTCTCCGATGCCGTGGGT 104812 | ||| | ||| | ||| | || || || || || || ||| |||| | || Sbjct 5389534 AACGGCGACTGGACGCTCATGTGCCCCAACGAGTGCCCCGGCCTCGCCGACTGCTACGGC 5389593 Query 104813 GAGGAGTTTGAAGCCCTTTACACAAAGTACGAGGAAGAAGGTCGGGCGACTGC--GACGG 104870 || ||||| || || || ||| |||||||||| || || | ||| | || ||||| Sbjct 5389594 GACGAGTTCGAGGCGCTGTACGAAAAGTACGAGCGCGAGGGCC--GCGGCCGCAAGACGG 5389651 Query 104871 TGCCAGCTGCCGATG-TGTGGAAAGCTATTCTCAAGTCTCAAACCGAGACTGGTACACCA 104929 | | || | || | | ||| | | || ||| || | || || ||||| || | || Sbjct 5389652 TCCGCGC-CCAGAAGCTCTGGTACTCGATCCTCGAGGCCCAGACGGAGACGGGCAACCCC 5389710 Query 104930 TACATGCTTTACAAAGACGCCTGTAACCAAAAGAGTAATCAAAAGAATTTGGGTGTGATC 104989 | |||||| ||||| ||||| || |||| ||||| || || ||||| | || |||| Sbjct 5389711 TTCATGCTGTACAAGGACGCGTGCAACCGCAAGAGCAACCAGAAGAACCTCGGGACGATC 5389770 Query 104990 AAGAGTTCCAATCTCTGTACAGAAATCTTGGAATTTACAGACAAAGATGAGACGGCTGTG 105049 || ||||| || || || || ||| | || | | | || ||| ||| || Sbjct 5389771 CGCAGCTCCAACCTGTGCACCGAGATCATCGAGTACTCGGCGCCCGACGAGGTGGCCGTC 5389830 Query 105050 TGTAACCTCGCATCAATCGCTCTCCCCAAGTATGTGGATCCAGAGACAAAGAC--ATTTG 105107 || |||||||| || |||| || || | ||| || | | | || | | | | | Sbjct 5389831 TGCAACCTCGCGTCGCTCGCCCTGCCGGCCTTTGTCGA-CTACA-ACGAGGGCTGCTACG 5389888 Query 105108 ATTATGAAAAACTCCACGAAGTTACGAAAACTGTCACCAAAAACCTAAACAGAGTTATTG 105167 | | | || || ||||| || ||| ||| | ||||| ||| | | || | Sbjct 5389889 ACTTCAAGAAGCTGCACGAGGTGACGCGCGTCGTCGTCCGCAACCTCAACCGCATCATCG 5389948 Query 105168 ATAGAAATTTTTACCCCGTTGAGACTGCTCGTAAATCTAATATGAGACACCGTCCAATTG 105227 | || |||||||| || || || || || | | ||||| || || | Sbjct 5389949 ACGTCAACCACTACCCCGTCCAGGAGGCGCGCAACAGCAACTTCCGCCACCGACCCATCG 5390008 Query 105228 GTCTCGGTGTTCAGGGTCTCGCGGATGTATTCATTCTTTGTCGCCACGCA-----TTTGA 105282 | |||| || ||||| ||||| || | | ||| | | ||| |||| || || Sbjct 5390009 GCGTCGGCGTCCAGGGCCTCGCCGACG----CCTTCCTCG-CGCTGCGCATGCCCTTCGA 5390063 Query 105283 TTCCGACGAAGCGAAGGAAATCAATGCGCGCATATTTGAGACCATGTATCACGCCGCTCT 105342 ||| ||| ||| || | || || || || |||||||| || ||||| || | Sbjct 5390064 GTCCCCCGAGGCGCGCGAGCTGAACAAGCAGATCTTCGAGACCATCTACCACGCGGC-CC 5390122 Query 105343 TGAGGCGAGT---TCAGAGTTGGCAGAGGTTGATGGTCCATATGAAACCTTTGAGGGTTC 105399 ||| | |||| || ||| || | ||| | || || || ||||||||||| || Sbjct 5390123 TGACG-GAGTCGGTC-GAGCTGTCCAAGGAGCAGGGCCCGTACTCGACCTTTGAGGGATC 5390180 Query 105400 TCCAGCTTCACAAGGGGTGCTTCAATTTGATATGTGGGAAGGTGAGACCAAGCTTCACTA 105459 || || || | || | || || || || |||||| | | || | | || | Sbjct 5390181 GCCGGCCTCGGAGGGCATCCTCCAGTTCGACATGTGGAACGTCAAGCCGTCGGACCATTG 5390240 Query 105460 CGACTGGGAAGCTCTCAAGGAACGC----ATCAAGGAGAAGGGTCTTCGTAACAGTCTCC 105515 || ||||| | || | ||| ||||||||| | || | || ||||| || | Sbjct 5390241 GGAGTGGGAGACGCT----GCGCGCCGAGATCAAGGAGCACGGCATCCGCAACAGCCTGC 5390296 Query 105516 TCATGGCTCCAATGCCAACAGCCTCCACCGCACAAATCTTGGGTAATAATGAATGCTTTG 105575 | | || || ||||| || ||| ||| | || ||| |||| || || || ||||| | Sbjct 5390297 TGCTCGCGCCGATGCCGACGGCCAGCACGTCGCAGATCCTGGGCAACAACGAGTGCTTCG 5390356 Query 105576 AACCCTACACGACGAACATCTATCTGAGAAGAACCCTCGCGGGAGAGTTTGTGATTGTCA 105635 | || |||||| | |||||||| | | | | |||||| || |||||| | | |||| Sbjct 5390357 AGCCGTACACGTCCAACATCTACCAGCGCCGCGTCCTCGCCGGCGAGTTTCAGGTGGTCA 5390416 Query 105636 ACAAGCATCTCGTGGATGACCTCAAAGAGATTGGTCTCTGGTCCAAGGATATGAAGGATC 105695 || || | | |||||| || || || ||||||||| | | |||||| | | Sbjct 5390417 ACCCCTGGCTGCTCAAGGACCTCGTCGACATGGGACTCTGGTCCGACGCGATGAAGAACC 5390476 Query 105696 TCAT 105699 ||| Sbjct 5390477 GCAT 5390480 Score = 96.9 bits (106), Expect = 4e-15 Identities = 161/229 (70%), Gaps = 8/229 (3%) Strand=Plus/Minus Query 94732 ACAGTTCCGTGTATTCAAAAGAAAGCGGATTGGGCTATGAAGTGGTTTGAT-ACAA--AG 94788 |||||||| || || | ||||| || |||||||| || ||| | | |||| || Sbjct 2599113 ACAGTTCCTTGCATCCGCAAGAAGGCTGATTGGGCCCTGCGTTGGATCCAAGACAAGGAG 2599054 Query 94789 TCG-CGTTCCTTTGCTGAGCGACTCTTCGCATTTGCGTGTGTTGAGGGTATCTTCTTCTC 94847 || ||||| || | |||| | || ||||| || || || ||||||||| Sbjct 2599053 TCCACGTTC----GCCCAAAGACTTGTTGCCTTTGCCGCCGTCGAAGGCATCTTCTTCAG 2598998 Query 94848 TGGTTCCTTCTGCGCTATTTATTGGCTCAAGAAGCGAGGTCTCATGCCAGGTCTCTGCTT 94907 ||| | ||| | | || | ||||| |||||||| ||||||||||| ||||| || Sbjct 2598997 CGGTGCTTTCGCCTCAATCTTCTGGCTGAAGAAGCGCGGTCTCATGCCTGGTCTGACATT 2598938 Query 94908 CTCCAACGAGCTTATCTCTCGTGACGAGGGACTCCACCAAGAGTTTGCG 94956 |||||||||||| ||||| ||||| ||||| || ||| || |||||| Sbjct 2598937 CTCCAACGAGCTCATCTCGCGTGATGAGGGTCTTCACACCGATTTTGCG 2598889 >seq2 Length=10204147 Score = 86.0 bits (94), Expect = 7e-12 Identities = 165/241 (68%), Gaps = 2/241 (1%) Strand=Plus/Plus Query 9688 GCGTTGCTTTCCCACGGCATCAATCTCATCAATGAAGACGATGCATGGTTGATTTTCGCG 9747 |||| | |||| | ||| || || || || ||||||| |||||| || ||| | ||| Sbjct 3082846 GCGTGCCCTTCCGATGGCGTCGATTTCGTCGATGAAGATGATGCACGGCGCATTCTTGCG 3082905 Query 9748 AGCGACTTCAAAGAGATCCCGTACACGCTTGGCGCCCACACCAACAAACATCTCCACAAA 9807 | | | || || || || || || || ||| || || || ||||| |||||||| Sbjct 3082906 GCCCTCGGCGAACAGGTCACGCACGCGAGAGGGGCCAACGCCGACGAACATTTCCACAAA 3082965 Query 9808 GTTTGCGGCGGA-ACATTGGATGAAGGGGACATTAGATTCACCCGCAATGGCTCGGGCGA 9866 | | | || || || | |||||| || ||| || || || |||| ||||| Sbjct 3082966 CTCGGAGCCGCTGACGCTGAA-GAAGGGCACGCCAGACTCGCCGGCCGTGGCCTTGGCGA 3083024 Query 9867 GAAGAGTCTTACCCGTACCTGGCTTACCCGCGAGGAGGGCACCTCGTGGAATCTTGGCGC 9926 | || ||||| ||||| || ||| || ||||||| ||| || || || |||||||||| Sbjct 3083025 GGAGCGTCTTGCCCGTGCCGGGCGGGCCGGCGAGGATGGCGCCGCGAGGGATCTTGGCGC 3083084 Query 9927 C 9927 | Sbjct 3083085 C 3083085 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 583260595858720