Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Drechmeria_20coniospora_20[genbank_20GCA_5F001625195.1_202016-04-24]
28 sequences; 32,831,003 total letters
Query= NC_028094.1
Length=473558
Score E
Sequences producing significant alignments: (Bits) Value
seq1 167 7e-36
>seq1
Length=12542233
Score = 167 bits (184), Expect = 7e-36
Identities = 694/1079 (64%), Gaps = 21/1079 (2%)
Strand=Plus/Plus
Query 349262 GAAATAATTGCAAATGATCAAGGTAACAGAACAACGCCATCATACGTTGCATTTACCGAA 349321
|| || ||||| || || || || ||| |||| ||||| || | |||||| || || ||
Sbjct 9149259 GACATCATTGCCAACGACCAGGGCAACCGAACGACGCCCTCGTTCGTTGCCTTCACTGAC 9149318
Query 349322 ACTGAGCGTATGATTGGTGATTCTGCAAAAAATCAAGCTGCTGCTAATCCAAAAAATACG 349381
|| ||||| ||||||||||| | || || || || | || || || | || ||
Sbjct 9149319 ACGGAGCGCCTGATTGGTGATGCCGCCAAGAACCAGGTGGCCATGAACCCTCACAACACT 9149378
Query 349382 GTTTTTGATGCTAAGCGACTTATTGGTAG-AAGTTT--TTCTGACAAA-TCTACACAATC 349437
|| ||||| || |||||| | ||||| | ||||| | || | | || ||| |
Sbjct 9149379 GTCTTTGACGCCAAGCGATTGATTGGCCGCAAGTTCAGTGATGCCGAGGTC----CAAGC 9149434
Query 349438 TGATCTAAAACATTTTCCTTTTACTGTTGTTCCAAAAGACGGTGATAAACCAATTATTGA 349497
|| | || || || || || | | | || | ||| |||| || || || || ||
Sbjct 9149435 CGACATGAAGCACTTCCCCTTCAA-GATCATCGACAAG--GGTGGCAAGCCCATAATCGA 9149491
Query 349498 GGTTGAATATAAAGGTGAACAAAAACAATTTTTACCCGAAGAAATTTCATCAATGGTTTT 349557
||| || | || || || || || || ||||| || || || || ||||| |
Sbjct 9149492 GGTCGAGTTCAAGGGCGAGCAGAAGACGTTCACTCCCGAGGAGATCTCCTCCATGGTCCT 9149551
Query 349558 AGTTAAAATGAAGGAAATTGCTGA-AGCATATTTAGG-TGAAACAGTAACTGATGCTGTT 349615
|| ||| || | ||| || ||| || | || || | ||| || | |||||
Sbjct 9149552 CACCAAGATGCGTGAGACTGCCGAGAGC-TACCTCGGCTGCCA-AGTGACCAACGCTGTC 9149609
Query 349616 ATTACTGTACCAGCCTATTTTAATGATGCCCAGCGTTCTGCAACAAAAGATGCTGGCAGC 349675
| || || || ||||| || || || ||||||| || || || || || || |
Sbjct 9149610 GTCACCGTTCCTGCCTACTTCAACGACAGCCAGCGTCAGGCCACCAAGGACGCCGGTCTC 9149669
Query 349676 ATTGCGGGGTTAAATGTTCTAAGAATGATTAATGAACCCACTGCTGCAGCAATTGCATAT 349735
||||| || | || || || |||| || || || || || ||||| || ||||| |||
Sbjct 9149670 ATTGCCGGTCTCAACGTCCTCCGAATCATCAACGAGCCTACCGCTGCCGCCATTGCCTAT 9149729
Query 349736 GGGCTTGATAAAATGAGTGACCAAGaaaaaaaTATTCTTATTTTTGATTTAGGTGGTGGT 349795
|| || || || | | || || || | || ||||| ||| | |||||||||
Sbjct 9149730 GGTCTCGACAAGAAGGTCGAGGGCGAGCGCAACGTCCTCATTTTCGATCTCGGTGGTGGT 9149789
Query 349796 ACTTTTGATGTATCACTACTAACACTTGAAGAGGGAATTTTTGAAGTTAAAGCAACTGCT 349855
|| |||||||| || || || || | || ||||| || || || || || | ||||||
Sbjct 9149790 ACCTTTGATGTCTCTCTCCTTACCATCGAGGAGGGCATCTTCGAGGTCAAGTCGACTGCT 9149849
Query 349856 GGTGATACACATCTTGGTGGAGAAGATTTTGATAATCGTCTCGTTTCGCATTTTGTTAAA 349915
||||| || || | || || || || || || || || || || || || || ||
Sbjct 9149850 GGTGACACTCACTTGGGCGGTGAGGACTTCGACAACCGCCTGGTGAACCACTTCGTCAAT 9149909
Query 349916 GAATTTAAGCGTCAAGC-TAAAATTGA--TATTGGAGATAATCCTAGAGCAATGCGTCGC 349972
|| || ||||| ||||| || | || | | | | || | || |||| ||
Sbjct 9149910 GAGTTCAAGCG-CAAGCACAAGAAGGACCTGTCTACCAACAGCC--GTGCCCTGCGACGT 9149966
Query 349973 CTAAGAACTGCGTGTGAACGTGCTAAGCGTTCCTTATCATCTACTACCCAAACCTCTATT 350032
|| |||| || || || || || |||||| | | || || || |||| || || ||
Sbjct 9149967 CTCCGAACCGCTTGCGAGCGCGCCAAGCGTACTCTGTCTTCCTCTGCCCAGACGTCGATC 9150026
Query 350033 GAAATTGATTCTCTTGCTGATGGCAAAGATTTCTTTTCATCTATTACACGTGCTCGGTTT 350092
||||| || ||||| ||| |||| ||||||| | || || || || ||||| ||
Sbjct 9150027 GAAATCGACTCTCTGTTTGAGGGCATCGATTTCTACACCTCCATCACCCGCGCTCGTTTC 9150086
Query 350093 GAAGAATTATGTATGGATCTTTTTAGAGCAACAATGGATCCTGTGGAAAAAGTATTAAAA 350152
|| || | || |||||| || | | || || | ||||| || || | |
Sbjct 9150087 GAGGAGCTCTGCCAGGATCTGTTCCGCTCCACCATCCAGCCTGTCGACCGCGTCCTGACC 9150146
Query 350153 GATGCAAAAATGTCCAAAAATCAGATTGATGAAGTAGTTTTAGTTGGTGGTTCTACACGT 350212
|| || || || ||| | ||| || | || | || | || ||||| || || |||
Sbjct 9150147 GACGCCAAGGTGGACAAGAGCCAGGTTCACGAGATCGTCCTTGTCGGTGGCTCCACTCGT 9150206
Query 350213 ATTCCAAAAGTTCAACAGTTACTATCTGAGTTTTTTAATGGCAAAGAACCTTCTAGATCA 350272
|| || ||| || || | | | || | || || ||||| || || | |||
Sbjct 9150207 ATCCCCCGAGTGCAGAAGCTCATCACCGACTACTTCAACGGCAAGGAGCCCAACAAGTCA 9150266
Query 350273 ATTAATCCAGATGAAGCTGTTGCATATGGTGCTGCTGTTCAGGCATCTATTTTATCTGG 350331
|| || || || || |||||||| || ||||| || || ||||| ||||| | |||||
Sbjct 9150267 ATCAACCCTGACGAGGCTGTTGCCTACGGTGCCGCCGTCCAGGCTGCTATTCTCTCTGG 9150325
Score = 109 bits (120), Expect = 2e-18
Identities = 132/180 (73%), Gaps = 0/180 (0%)
Strand=Plus/Plus
Query 140550 TTTTGAATATTATAATCAGATAATGTTCGCCCATCTTCAAGTTGTTTTCCAGCAAAGATT 140609
|| || || || || || || || || || |||||||| || || || |||||||||||
Sbjct 3488290 TTCTGGATGTTGTAGTCCGACAAAGTCCGTCCATCTTCGAGCTGCTTACCAGCAAAGATC 3488349
Query 140610 AGACGTTGCTGATCAGGAGGAATTCCTTCTTTATCCTGAATTTTAGCTTTTACATTATCA 140669
| | ||||||||| || ||||| || || || ||||| || || | || ||||| ||
Sbjct 3488350 AATCTTTGCTGATCCGGGGGAATGCCCTCCTTGTCCTGGATCTTGGACTTGACATTGTCG 3488409
Query 140670 ATCGAATCAGATGGTTCAACTTCAAGTGTAACTGTCTTTCCGGTTAGTGTTTTTACAAAA 140729
|| | ||||| | || |||||||| |||| ||||| || ||||| || || || |||
Sbjct 3488410 ATAGTGTCAGAAGACTCGACTTCAAGCGTAATCGTCTTGCCCGTTAGGGTCTTCACGAAA 3488469
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 1515253856402484
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |