Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Drechmeria_20coniospora_20[genbank_20GCA_5F001625195.1_202016-04-24] 28 sequences; 32,831,003 total letters Query= NC_028094.1 Length=473558 Score E Sequences producing significant alignments: (Bits) Value seq1 167 7e-36 >seq1 Length=12542233 Score = 167 bits (184), Expect = 7e-36 Identities = 694/1079 (64%), Gaps = 21/1079 (2%) Strand=Plus/Plus Query 349262 GAAATAATTGCAAATGATCAAGGTAACAGAACAACGCCATCATACGTTGCATTTACCGAA 349321 || || ||||| || || || || ||| |||| ||||| || | |||||| || || || Sbjct 9149259 GACATCATTGCCAACGACCAGGGCAACCGAACGACGCCCTCGTTCGTTGCCTTCACTGAC 9149318 Query 349322 ACTGAGCGTATGATTGGTGATTCTGCAAAAAATCAAGCTGCTGCTAATCCAAAAAATACG 349381 || ||||| ||||||||||| | || || || || | || || || | || || Sbjct 9149319 ACGGAGCGCCTGATTGGTGATGCCGCCAAGAACCAGGTGGCCATGAACCCTCACAACACT 9149378 Query 349382 GTTTTTGATGCTAAGCGACTTATTGGTAG-AAGTTT--TTCTGACAAA-TCTACACAATC 349437 || ||||| || |||||| | ||||| | ||||| | || | | || ||| | Sbjct 9149379 GTCTTTGACGCCAAGCGATTGATTGGCCGCAAGTTCAGTGATGCCGAGGTC----CAAGC 9149434 Query 349438 TGATCTAAAACATTTTCCTTTTACTGTTGTTCCAAAAGACGGTGATAAACCAATTATTGA 349497 || | || || || || || | | | || | ||| |||| || || || || || Sbjct 9149435 CGACATGAAGCACTTCCCCTTCAA-GATCATCGACAAG--GGTGGCAAGCCCATAATCGA 9149491 Query 349498 GGTTGAATATAAAGGTGAACAAAAACAATTTTTACCCGAAGAAATTTCATCAATGGTTTT 349557 ||| || | || || || || || || ||||| || || || || ||||| | Sbjct 9149492 GGTCGAGTTCAAGGGCGAGCAGAAGACGTTCACTCCCGAGGAGATCTCCTCCATGGTCCT 9149551 Query 349558 AGTTAAAATGAAGGAAATTGCTGA-AGCATATTTAGG-TGAAACAGTAACTGATGCTGTT 349615 || ||| || | ||| || ||| || | || || | ||| || | ||||| Sbjct 9149552 CACCAAGATGCGTGAGACTGCCGAGAGC-TACCTCGGCTGCCA-AGTGACCAACGCTGTC 9149609 Query 349616 ATTACTGTACCAGCCTATTTTAATGATGCCCAGCGTTCTGCAACAAAAGATGCTGGCAGC 349675 | || || || ||||| || || || ||||||| || || || || || || | Sbjct 9149610 GTCACCGTTCCTGCCTACTTCAACGACAGCCAGCGTCAGGCCACCAAGGACGCCGGTCTC 9149669 Query 349676 ATTGCGGGGTTAAATGTTCTAAGAATGATTAATGAACCCACTGCTGCAGCAATTGCATAT 349735 ||||| || | || || || |||| || || || || || ||||| || ||||| ||| Sbjct 9149670 ATTGCCGGTCTCAACGTCCTCCGAATCATCAACGAGCCTACCGCTGCCGCCATTGCCTAT 9149729 Query 349736 GGGCTTGATAAAATGAGTGACCAAGaaaaaaaTATTCTTATTTTTGATTTAGGTGGTGGT 349795 || || || || | | || || || | || ||||| ||| | ||||||||| Sbjct 9149730 GGTCTCGACAAGAAGGTCGAGGGCGAGCGCAACGTCCTCATTTTCGATCTCGGTGGTGGT 9149789 Query 349796 ACTTTTGATGTATCACTACTAACACTTGAAGAGGGAATTTTTGAAGTTAAAGCAACTGCT 349855 || |||||||| || || || || | || ||||| || || || || || | |||||| Sbjct 9149790 ACCTTTGATGTCTCTCTCCTTACCATCGAGGAGGGCATCTTCGAGGTCAAGTCGACTGCT 9149849 Query 349856 GGTGATACACATCTTGGTGGAGAAGATTTTGATAATCGTCTCGTTTCGCATTTTGTTAAA 349915 ||||| || || | || || || || || || || || || || || || || || Sbjct 9149850 GGTGACACTCACTTGGGCGGTGAGGACTTCGACAACCGCCTGGTGAACCACTTCGTCAAT 9149909 Query 349916 GAATTTAAGCGTCAAGC-TAAAATTGA--TATTGGAGATAATCCTAGAGCAATGCGTCGC 349972 || || ||||| ||||| || | || | | | | || | || |||| || Sbjct 9149910 GAGTTCAAGCG-CAAGCACAAGAAGGACCTGTCTACCAACAGCC--GTGCCCTGCGACGT 9149966 Query 349973 CTAAGAACTGCGTGTGAACGTGCTAAGCGTTCCTTATCATCTACTACCCAAACCTCTATT 350032 || |||| || || || || || |||||| | | || || || |||| || || || Sbjct 9149967 CTCCGAACCGCTTGCGAGCGCGCCAAGCGTACTCTGTCTTCCTCTGCCCAGACGTCGATC 9150026 Query 350033 GAAATTGATTCTCTTGCTGATGGCAAAGATTTCTTTTCATCTATTACACGTGCTCGGTTT 350092 ||||| || ||||| ||| |||| ||||||| | || || || || ||||| || Sbjct 9150027 GAAATCGACTCTCTGTTTGAGGGCATCGATTTCTACACCTCCATCACCCGCGCTCGTTTC 9150086 Query 350093 GAAGAATTATGTATGGATCTTTTTAGAGCAACAATGGATCCTGTGGAAAAAGTATTAAAA 350152 || || | || |||||| || | | || || | ||||| || || | | Sbjct 9150087 GAGGAGCTCTGCCAGGATCTGTTCCGCTCCACCATCCAGCCTGTCGACCGCGTCCTGACC 9150146 Query 350153 GATGCAAAAATGTCCAAAAATCAGATTGATGAAGTAGTTTTAGTTGGTGGTTCTACACGT 350212 || || || || ||| | ||| || | || | || | || ||||| || || ||| Sbjct 9150147 GACGCCAAGGTGGACAAGAGCCAGGTTCACGAGATCGTCCTTGTCGGTGGCTCCACTCGT 9150206 Query 350213 ATTCCAAAAGTTCAACAGTTACTATCTGAGTTTTTTAATGGCAAAGAACCTTCTAGATCA 350272 || || ||| || || | | | || | || || ||||| || || | ||| Sbjct 9150207 ATCCCCCGAGTGCAGAAGCTCATCACCGACTACTTCAACGGCAAGGAGCCCAACAAGTCA 9150266 Query 350273 ATTAATCCAGATGAAGCTGTTGCATATGGTGCTGCTGTTCAGGCATCTATTTTATCTGG 350331 || || || || || |||||||| || ||||| || || ||||| ||||| | ||||| Sbjct 9150267 ATCAACCCTGACGAGGCTGTTGCCTACGGTGCCGCCGTCCAGGCTGCTATTCTCTCTGG 9150325 Score = 109 bits (120), Expect = 2e-18 Identities = 132/180 (73%), Gaps = 0/180 (0%) Strand=Plus/Plus Query 140550 TTTTGAATATTATAATCAGATAATGTTCGCCCATCTTCAAGTTGTTTTCCAGCAAAGATT 140609 || || || || || || || || || || |||||||| || || || ||||||||||| Sbjct 3488290 TTCTGGATGTTGTAGTCCGACAAAGTCCGTCCATCTTCGAGCTGCTTACCAGCAAAGATC 3488349 Query 140610 AGACGTTGCTGATCAGGAGGAATTCCTTCTTTATCCTGAATTTTAGCTTTTACATTATCA 140669 | | ||||||||| || ||||| || || || ||||| || || | || ||||| || Sbjct 3488350 AATCTTTGCTGATCCGGGGGAATGCCCTCCTTGTCCTGGATCTTGGACTTGACATTGTCG 3488409 Query 140670 ATCGAATCAGATGGTTCAACTTCAAGTGTAACTGTCTTTCCGGTTAGTGTTTTTACAAAA 140729 || | ||||| | || |||||||| |||| ||||| || ||||| || || || ||| Sbjct 3488410 ATAGTGTCAGAAGACTCGACTTCAAGCGTAATCGTCTTGCCCGTTAGGGTCTTCACGAAA 3488469 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1515253856402484