Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Drechmeria_20coniospora_20[genbank_20GCA_5F001625195.1_202016-04-24]
28 sequences; 32,831,003 total letters
Query= NC_028110.1
Length=171045
Score E
Sequences producing significant alignments: (Bits) Value
seq3 338 7e-88
seq1 123 3e-23
>seq3
Length=9751215
Score = 338 bits (374), Expect = 7e-88
Identities = 535/758 (71%), Gaps = 14/758 (2%)
Strand=Plus/Plus
Query 53193 TCATGCGCGTCGCCTTGGGTATCCACGGTGACGACTACACGCGTGTCCGTGAGACGTACG 53252
|||||||||| | | || ||| || ||| || | ||| ||| |||||||||
Sbjct 5389013 TCATGCGCGTGTCGGTCGGCATCTGGGGCGACAACATCGAGCGCGTCATCGAGACGTACA 5389072
Query 53253 ACTTAATG---AGCCAAAAGTACTTTACGCACGCCACGCCAACCCTGTTCAACGCTGGTA 53309
| | ||| ||| | | || | ||||||||| |||| || || |||||||| || |
Sbjct 5389073 ATCTCATGTCGAGCAAGATGTTC---ACGCACGCCTCGCCGACGCTCTTCAACGCCGGCA 5389129
Query 53310 CGAATCACCCTCAGATGTCGAGCTGCTTCCTGGTGGCGATGAAGGATGACTCGATCGACG 53369
|| || | ||| ||||| |||||||| || | |||||||| ||| ||||| |
Sbjct 5389130 CGCCGCAGGCGCAGCTGTCGTCGTGCTTCCTCGTCGACATGAAGGACGACAGCATCGAGG 5389189
Query 53370 GCATCTACGAGACGCTCAAGGAGTGTGCCCACATCTCCAAGTGGTCGGGTGGTATCGGTA 53429
|||||||||| ||||||||| ||| ||| ||||||||| | | || || |||||
Sbjct 5389190 GCATCTACGACACGCTCAAGACGTGCGCCATGATCTCCAAGATGGCCGGCGGCATCGGCC 5389249
Query 53430 TCCACTGCTCGAACG--TCCGTGCGAACGGCACACCAATCAAGGGGACGAACGGCGTCGC 53487
|| || || | || |||| || | ||| | || || || ||||| | |
Sbjct 5389250 TCAACA--TCCACCGCATCCGCGCCACCGGATCCTACATTGCCGGCACCAACGGTACCTC 5389307
Query 53488 CGATGGAATCGTGCCTATGCTCCGCGTCTTCAACAACACGGCCCGGTACGTCAACCAGGG 53547
| | || ||| ||| ||||| |||||||||||||||||||||||||||||| |||||||
Sbjct 5389308 CAACGGCATCACGCCCATGCTTCGCGTCTTCAACAACACGGCCCGGTACGTCGACCAGGG 5389367
Query 53548 TGGTGGGAAGCGCAAGGGGTCGTTCGCCATCTACCTCGAGCCGTGGCACGCCGACATTAT 53607
|| ||||| ||| | |||||||||||||| || ||||||||||||||| || |
Sbjct 5389368 CGGCAACAAGCGGCCGGGCGCCTTCGCCATCTACCTGGAACCGTGGCACGCCGACGTTTT 5389427
Query 53608 GGAGTTTCTCGAGCTGCGTCTGAATCAGGGTGACGAAGAGATGCGCTGCCGTGACCTGTT 53667
||||||||||| ||||| ||| || || | || ||| ||||| || ||||||||
Sbjct 5389428 TGAGTTTCTCGACCTGCGCAAGAACCACGGCAAGGAGGAGGTGCGCGCGCGCGACCTGTT 5389487
Query 53668 TACAGCTCTGTGGATTCCGGACCTCTTCATGCAAAAGGTGGAGAAGGACGAGGAGTGGTA 53727
|| || ||||| || |||||||||||| | || |||||| ||| || |||
Sbjct 5389488 CCTCGCGCTCTGGATCCCCGACCTCTTCATGAAGCGCGTCGAGAAGAACGGCGACTGGAC 5389547
Query 53728 CCTGATGTGCCCGAACGAGTGCCCCGGCCTC-CAGGGTGTCTACGGTGAGGAGTTTAACG 53786
|| |||||||| |||||||||||||||||| | | || |||||| || ||||| | |
Sbjct 5389548 GCTCATGTGCCCCAACGAGTGCCCCGGCCTCGCCGACTG-CTACGGCGACGAGTTCGAGG 5389606
Query 53787 AGATGTATCGGACGTACGCAGTTC-AGGGCCGCTACAAGAAGAAGGTCAAGGCGCGTGAG 53845
| |||| | ||||| || | |||||||| | |||| |||| || | ||
Sbjct 5389607 CGCTGTACGAAAAGTACG-AGCGCGAGGGCCGCGGCCGCAAGACGGTCCGCGCCCAGAAG 5389665
Query 53846 GTATGGGATGCAATCCTCAAGAGCCAGGTGGAGACGGGAACGCCGTACATGTGCTACAAG 53905
| ||| | | |||||| || |||| ||||||||| | || | |||| ||||||
Sbjct 5389666 CTCTGGTACTCGATCCTCGAGGCCCAGACGGAGACGGGCAACCCCTTCATGCTGTACAAG 5389725
Query 53906 GATTCGGTCAACGAGAAGAGCAACCAGAAGAACATCGG 53943
|| || |||| |||||||||||||||||| ||||
Sbjct 5389726 GACGCGTGCAACCGCAAGAGCAACCAGAAGAACCTCGG 5389763
Score = 188 bits (208), Expect = 8e-43
Identities = 564/851 (66%), Gaps = 36/851 (4%)
Strand=Plus/Plus
Query 55097 GACTTTGACAAGCTTCACGAAGTGACGCGTGTTGTGACTCGGAACCTGAACCGGGTCATC 55156
||||| | ||||| ||||| |||||||| || || || ||||| ||||| |||||
Sbjct 5389888 GACTTCAAGAAGCTGCACGAGGTGACGCGCGTCGTCGTCCGCAACCTCAACCGCATCATC 5389947
Query 55157 GACAAGAATTACTACCCGACTGAAGCGGCGCGCAAGTCCAACCTCCGGCACCGGCCCATC 55216
||| || ||||||| | | ||||||||| |||| |||| ||||| ||||||
Sbjct 5389948 GACGTCAACCACTACCCCGTCCAGGAGGCGCGCAACAGCAACTTCCGCCACCGACCCATC 5390007
Query 55217 GCCATCGGTGTACAGGGCTTGGCCGACATCTTCATGATGCTCGGATTGCCCTTCGACTCG 55276
| | |||| || |||||| | |||||| |||| | ||| | |||||||||| ||
Sbjct 5390008 GGCGTCGGCGTCCAGGGCCTCGCCGACGCCTTCCTCGCGCTGCGCATGCCCTTCGAGTCC 5390067
Query 55277 GAACCTGCTCGAGAAATTAACCAGGACATCTTC-AGTCGCATCTACTTTGCAGCGCTCGA 55335
|| || || | ||| || | |||||| || | ||||||| || || ||
Sbjct 5390068 CCCGAGGCGCGCGAGCTGAACAAGCAGATCTTCGAGAC-CATCTACCACGCGGCCCTGAC 5390126
Query 55336 GGAGTCGTGTC-ATCTGGCTATG-AGCGAGGGGACCTACGAGACGTTCCGTGATTCGCCA 55393
||||||| ||| | ||| | | | ||| |||| | ||| ||| || | |||||
Sbjct 5390127 GGAGTCG-GTCGAGCTGTCCAAGGAGC-AGGGCCCGTACTCGACCTTTGAGGGATCGCCG 5390184
Query 55394 GCTGACAAGGGACTTCTCCAGTTCGATCTATGG---GGCAAG---TCTGACCCCAT---- 55443
|| |||| | ||||||||||| | ||| | |||| || |||| ||
Sbjct 5390185 GCCTCGGAGGGCATCCTCCAGTTCGACATGTGGAACGTCAAGCCGTCGGACC--ATTGGG 5390242
Query 55444 -GTTTGACAAGTTGAAGCATGACATTCACTTGTGGGGCCTACGCAACTCCCTGCTCGTGG 55502
|| || | | || || || | | ||| | |||||| |||||| | |
Sbjct 5390243 AGTGGGAGACGCTGCGCGCCGAGATCAAGGAGCACGGCATCCGCAACAGCCTGCTGCTCG 5390302
Query 55503 CGCCAATGCCAACCGCGTCGACGGCTCAGATCATGGGCAACAACGAGGCGTTCGAGCCGT 55562
|||| ||||| || || ||| | |||||| |||||||||||||| ||||||||||
Sbjct 5390303 CGCCGATGCCGACGGCCAGCACGTCGCAGATCCTGGGCAACAACGAGTGCTTCGAGCCGT 5390362
Query 55563 ACACGACCAACATCTACCTGCGCCGGACCCTAGCAGGTGAGTTTGTCATGATCAACAAGC 55622
||||| |||||||||||| |||||| ||| || || |||||| || |||||
Sbjct 5390363 ACACGTCCAACATCTACCAGCGCCGCGTCCTCGCCGGCGAGTTTCAGGTGGTCAACCCCT 5390422
Query 55623 ACCTCGTCAAGGACCTGCAGAAGATCAACAAGTGGAAC-CCGCAGATCAAGA--CGGAT- 55678
|| |||||||||| | || ||| | ||| ||| |||| || ||
Sbjct 5390423 GGCTGCTCAAGGACCTCGTCGACATGGGACTCTGGTCCGACGC-GATGAAGAACCGCATC 5390481
Query 55679 ATTGTGCGGAACGGGGGGTCCGTCCAGAATCTGG--AGATTCCTCTGCGTC-TCAAGGAG 55735
|| | | |||| ||||| ||||||| | | | ||| || | ||||||
Sbjct 5390482 ATCGCGGAGAAC---GGGTCGATCCAGAACATTGCCAACATCCCGGCCGACATCAAGGCC 5390538
Query 55736 ATTTACCGGACGGTGTGGGAGATTCCACAGAAGAGTCTGATTGACATGAGTGCTGATCGT 55795
| ||| |||||| ||||||||| | ||| | || | | ||| || || ||
Sbjct 5390539 CTCTACAAGACGGTCTGGGAGATTTCGCAGCGGCAGGTGGTGCAGATGGCGGCCGACCGC 5390598
Query 55796 GGTGCGTACATCGACCAGTCCCAGTCTCTGAACATCTTCATGGAGAATCCTTCACTGGCC 55855
|| || | |||||||||||||||||| || ||||| |||| || | || | ||| |
Sbjct 5390599 GGCGCCTTCATCGACCAGTCCCAGTCGCTCAACATTCACATGAAGGACCCGACCATGGGC 5390658
Query 55856 AAGTT---GAGCTCGATGCACTTTTACGGGTGGAAGAAGGGACTCAAGACGGGTATGTAC 55912
||| | |||| ||||||||| ||| |||||| || ||||||||||| ||||||
Sbjct 5390659 AAGATCACGAGC---ATGCACTTTGCCGGCTGGAAGCTCGGCCTCAAGACGGGCATGTAC 5390715
Query 55913 TATCTGCGGAC 55923
|| ||||||||
Sbjct 5390716 TACCTGCGGAC 5390726
Score = 93.3 bits (102), Expect = 5e-14
Identities = 84/106 (79%), Gaps = 0/106 (0%)
Strand=Plus/Plus
Query 74805 AGGCCAGGCATAAGTCCACGCTTCTTCAACCAAAAGATGGCACAGAAGGAACCACTGAAG 74864
|| |||||||| || || |||||||||| ||| ||||| | ||| | ||| ||||||
Sbjct 2598944 AGACCAGGCATGAGACCGCGCTTCTTCAGCCAGAAGATTGAGGCGAAAGCACCGCTGAAG 2599003
Query 74865 AAGATGCCTTCGACACACGCAAAGGCGACAAGGCGTTGCGCGAACG 74910
|||||||||||||| |||||||| ||||| | ||| |||||||
Sbjct 2599004 AAGATGCCTTCGACGGCGGCAAAGGCAACAAGTCTTTGGGCGAACG 2599049
>seq1
Length=12542233
Score = 123 bits (136), Expect = 3e-23
Identities = 211/304 (69%), Gaps = 4/304 (1%)
Strand=Plus/Minus
Query 117299 AGGCGAGTGAAAATGTAACGAGAGCTTGCAGCATCCTTGCCACCAGCAAGACGCGTACCG 117358
|| || || || ||||||| | ||| || || || || || || || || | |||
Sbjct 2158400 AGACGGGTAAATGTGTAACGCGGGCTCGCGGCGTCGGAACCTCCGGCCAGTCGGGAACCA 2158341
Query 117359 AATTGTCCACTCGGCTCCAAGAGGTTCAGGTTGTTGGCGCCCACAAAGTTTTGAGCCAAG 117418
|| | || |||||||| | ||| | |||||||| || || || || || ||||||
Sbjct 2158340 AAGTTGCCGCTCGGCTCGAGACAGTTGATGTTGTTGGATCCGACGAAATTCTGGGCCAAG 2158281
Query 117419 TTGACAATCGTACCTTGGAGGCTCGCCTCACCATGGTGATACGCCGTCTGCTCCGCCACG 117478
|| || || ||||| | |||| || ||||| || ||||||||||||| |||
Sbjct 2158280 CCGATGATGGTCTGCTGGAGCGACACCTCGCCGTGGTGGTAGGCCGTCTGCTCCGAGACG 2158221
Query 117479 TAGCCCGCCAGCTGAGCCACCTTCATGTC--TGACGTCAGGTTCTTCTTGAGGCAGGCAT 117536
|| || || || | | |||||| |||| ||||| ||||| ||||| |||||| |
Sbjct 2158220 TAACCTGCGAGTTCGACGACCTTCTTGTCCTTGACG--AGGTTTCGCTTGAAGCAGGCGT 2158163
Query 117537 AAATCACCTTGCGCTGACTTGGCTTCAGACCATCCGCCACGTGAGGGATCGAACGCTTGA 117596
|||||||||||||||| |||||||| || || ||| ||||| || ||| ||
Sbjct 2158162 GCATCACCTTGCGCTGACCAGGCTTCAGGCCGTCGAGAACGGAGGGGATGGATCGCATGT 2158103
Query 117597 TGTC 117600
||||
Sbjct 2158102 TGTC 2158099
Score = 109 bits (120), Expect = 6e-19
Identities = 204/300 (68%), Gaps = 0/300 (0%)
Strand=Plus/Minus
Query 152025 ACGCGTGAAGATGTATCGGGAGCTGGCCGCATCCTTGCCACCTGCCAGCCGCGTTCCAAA 152084
||| || || |||| || | ||| || || || || || ||||| || | |||||
Sbjct 2158398 ACGGGTAAATGTGTAACGCGGGCTCGCGGCGTCGGAACCTCCGGCCAGTCGGGAACCAAA 2158339
Query 152085 CTGTCCAGAGGGCTCGAGGAGGTTGAGGTTGTTGGCGCCCACGAAATTCTGAGCCAAATT 152144
| || |||||||| ||||| |||||||| || ||||||||||| |||||
Sbjct 2158338 GTTGCCGCTCGGCTCGAGACAGTTGATGTTGTTGGATCCGACGAAATTCTGGGCCAAGCC 2158279
Query 152145 CACAATCGTGCCCTGCAGACTCGCTTCACCGTGGTGATACGCCGTCTGCTCCGCGATGTA 152204
| || || ||| || | | || |||||||| || ||||||||||||| || |||
Sbjct 2158278 GATGATGGTCTGCTGGAGCGACACCTCGCCGTGGTGGTAGGCCGTCTGCTCCGAGACGTA 2158219
Query 152205 TCCCGCCAACTGCGCCACCTTCATGTCCGTCGTCAGGTTCTTCTTGAGACAGGCGTAAAT 152264
|| || | | | |||||| ||||| | ||||| ||||| ||||||| ||
Sbjct 2158218 ACCTGCGAGTTCGACGACCTTCTTGTCCTTGACGAGGTTTCGCTTGAAGCAGGCGTGCAT 2158159
Query 152265 CACCTTGCGCTGGGATGGTTTCAAACCGTCCACCACGTGAGGAATCGAACGCTTGATGTC 152324
|||||||||||| || |||| ||||| | ||| || || || ||| || ||||
Sbjct 2158158 CACCTTGCGCTGACCAGGCTTCAGGCCGTCGAGAACGGAGGGGATGGATCGCATGTTGTC 2158099
Score = 104 bits (114), Expect = 3e-17
Identities = 232/342 (68%), Gaps = 6/342 (2%)
Strand=Plus/Minus
Query 152769 GTTGAGGACCAAGCCCTTGATGTGCGATCCGTCAAGATCCGCGTCGGTCATGATCATCAG 152828
||||| || | |||||||||||| ||||| ||||| |||| ||||||||||||
Sbjct 2157648 GTTGATGAGGAGGCCCTTGATGTGGCTACCGTCGTGATCCTGATCGGCCATGATCATCAG 2157589
Query 152829 ACGACCGTAGCGCAGGTCACGTAGTGAC-CCGTAGACCTTTCCATGTTGAAGCCCGAGGA 152887
| |||||||| ||| | | | ||| | |||||||| | || | || |||||||
Sbjct 2157588 GTGGCCGTAGCGAAGG-CTCTTGGTGTCGGTGTAGACCTGTTTGTGCTTGAGGCCGAGGA 2157530
Query 152888 TCTTTTTGAGGTTGGAAAATTCCTCATTATCGGTCACCTGTTTCACCGTGGCATCCCGAA 152947
|| |||| ||| || |||| || | ||| | ||| | | || ||||| || |
Sbjct 2157529 ACTGCTTGATGTTCTGAATCTCCTGGTTCTTGGTGATCTGGTCGATCGACGCATCGCGCA 2157470
Query 152948 CATTGCGCGGCTTTCCCCGGAGTGGAAACACGCCGAACGCGTTGCGG--CCTACAACGCT 153005
| || || ||| || ||||| || || |||||| | ||| | ||| | | |||
Sbjct 2157469 CGTTTAGCATCTTGCCTCGGAGCGGGAAGACGCCG-ATGCGGTCCGGGTCGAGGATGGCT 2157411
Query 153006 CAGACCGGCAATAGCAAGGGCTTTCGCCGAGTCACCCTCGGTGATAATAAGCGTACAGTC 153065
| | |||| | || ||| | || ||||||||||| ||||||| ||| || || || ||
Sbjct 2157410 C-GTCCGGTCACGGCCAGGCCCTTGGCCGAGTCACCTTCGGTGAGAATGAGGGTGCACTC 2157352
Query 153066 GTGAGACCGATGAGTACCGGCCCAGTTGGCGTCGTCAAGCTT 153107
|| || || || ||| ||||||| ||| | |||||
Sbjct 2157351 ATGGCCACGCCTGGTGCCTGCCAAGTTGGCCTCGACGAGCTT 2157310
Score = 86.0 bits (94), Expect = 7e-12
Identities = 196/290 (68%), Gaps = 4/290 (1%)
Strand=Plus/Minus
Query 118012 GAGCCCCTTGATATGGGAACCGTCCAGATCCGCATCGGTCATGATCATCAGGCGGCCGTA 118071
||| |||||||| ||| |||||| ||||| ||||| ||||||||||||| |||||||
Sbjct 2157639 GAGGCCCTTGATGTGGCTACCGTCGTGATCCTGATCGGCCATGATCATCAGGTGGCCGTA 2157580
Query 118072 CCGTAAATCTCTCAG-GGAGTTATAAACCTTACCATGTTGGAGCCCGAGGATCTTTTTAA 118130
|| || |||| | | | | || |||| || | ||| ||||||| || || |
Sbjct 2157579 GCG-AAGGCTCTTGGTGTCGGTGTAGACCTGTTTGTGCTTGAGGCCGAGGAACTGCTTGA 2157521
Query 118131 GGTTGGAAAATTCCTCATTTTCCGTCACCTGTTTTATGGTGGCGTCCCGAACGTTGCGCG 118190
||| || |||| || | || | ||| | || | || || || ||||| ||
Sbjct 2157520 TGTTCTGAATCTCCTGGTTCTTGGTGATCTGGTCGATCGACGCATCGCGCACGTTTAGCA 2157461
Query 118191 GCTTACCCCGCAGTGGAAACACGCCAAACTTGTCACGGCCCA-CAACGCTCAAGCCGGCA 118249
||| || || || || || ||||| | ||| || | | | |||| ||||
Sbjct 2157460 TCTTGCCTCGGAGCGGGAAGACGCCGATGCGGTCCGGGTCGAGGATGGCTC-GTCCGGTC 2157402
Query 118250 ATAGCAAGGGCCTTCGCCGAGTCACCCTCGGTAATAATAAGAGTGCACTC 118299
| || ||| |||| ||||||||||| ||||| | ||| || ||||||||
Sbjct 2157401 ACGGCCAGGCCCTTGGCCGAGTCACCTTCGGTGAGAATGAGGGTGCACTC 2157352
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 547215808474400
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