Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Drechmeria_20coniospora_20[genbank_20GCA_5F001625195.1_202016-04-24] 28 sequences; 32,831,003 total letters Query= NC_028110.1 Length=171045 Score E Sequences producing significant alignments: (Bits) Value seq3 338 7e-88 seq1 123 3e-23 >seq3 Length=9751215 Score = 338 bits (374), Expect = 7e-88 Identities = 535/758 (71%), Gaps = 14/758 (2%) Strand=Plus/Plus Query 53193 TCATGCGCGTCGCCTTGGGTATCCACGGTGACGACTACACGCGTGTCCGTGAGACGTACG 53252 |||||||||| | | || ||| || ||| || | ||| ||| ||||||||| Sbjct 5389013 TCATGCGCGTGTCGGTCGGCATCTGGGGCGACAACATCGAGCGCGTCATCGAGACGTACA 5389072 Query 53253 ACTTAATG---AGCCAAAAGTACTTTACGCACGCCACGCCAACCCTGTTCAACGCTGGTA 53309 | | ||| ||| | | || | ||||||||| |||| || || |||||||| || | Sbjct 5389073 ATCTCATGTCGAGCAAGATGTTC---ACGCACGCCTCGCCGACGCTCTTCAACGCCGGCA 5389129 Query 53310 CGAATCACCCTCAGATGTCGAGCTGCTTCCTGGTGGCGATGAAGGATGACTCGATCGACG 53369 || || | ||| ||||| |||||||| || | |||||||| ||| ||||| | Sbjct 5389130 CGCCGCAGGCGCAGCTGTCGTCGTGCTTCCTCGTCGACATGAAGGACGACAGCATCGAGG 5389189 Query 53370 GCATCTACGAGACGCTCAAGGAGTGTGCCCACATCTCCAAGTGGTCGGGTGGTATCGGTA 53429 |||||||||| ||||||||| ||| ||| ||||||||| | | || || ||||| Sbjct 5389190 GCATCTACGACACGCTCAAGACGTGCGCCATGATCTCCAAGATGGCCGGCGGCATCGGCC 5389249 Query 53430 TCCACTGCTCGAACG--TCCGTGCGAACGGCACACCAATCAAGGGGACGAACGGCGTCGC 53487 || || || | || |||| || | ||| | || || || ||||| | | Sbjct 5389250 TCAACA--TCCACCGCATCCGCGCCACCGGATCCTACATTGCCGGCACCAACGGTACCTC 5389307 Query 53488 CGATGGAATCGTGCCTATGCTCCGCGTCTTCAACAACACGGCCCGGTACGTCAACCAGGG 53547 | | || ||| ||| ||||| |||||||||||||||||||||||||||||| ||||||| Sbjct 5389308 CAACGGCATCACGCCCATGCTTCGCGTCTTCAACAACACGGCCCGGTACGTCGACCAGGG 5389367 Query 53548 TGGTGGGAAGCGCAAGGGGTCGTTCGCCATCTACCTCGAGCCGTGGCACGCCGACATTAT 53607 || ||||| ||| | |||||||||||||| || ||||||||||||||| || | Sbjct 5389368 CGGCAACAAGCGGCCGGGCGCCTTCGCCATCTACCTGGAACCGTGGCACGCCGACGTTTT 5389427 Query 53608 GGAGTTTCTCGAGCTGCGTCTGAATCAGGGTGACGAAGAGATGCGCTGCCGTGACCTGTT 53667 ||||||||||| ||||| ||| || || | || ||| ||||| || |||||||| Sbjct 5389428 TGAGTTTCTCGACCTGCGCAAGAACCACGGCAAGGAGGAGGTGCGCGCGCGCGACCTGTT 5389487 Query 53668 TACAGCTCTGTGGATTCCGGACCTCTTCATGCAAAAGGTGGAGAAGGACGAGGAGTGGTA 53727 || || ||||| || |||||||||||| | || |||||| ||| || ||| Sbjct 5389488 CCTCGCGCTCTGGATCCCCGACCTCTTCATGAAGCGCGTCGAGAAGAACGGCGACTGGAC 5389547 Query 53728 CCTGATGTGCCCGAACGAGTGCCCCGGCCTC-CAGGGTGTCTACGGTGAGGAGTTTAACG 53786 || |||||||| |||||||||||||||||| | | || |||||| || ||||| | | Sbjct 5389548 GCTCATGTGCCCCAACGAGTGCCCCGGCCTCGCCGACTG-CTACGGCGACGAGTTCGAGG 5389606 Query 53787 AGATGTATCGGACGTACGCAGTTC-AGGGCCGCTACAAGAAGAAGGTCAAGGCGCGTGAG 53845 | |||| | ||||| || | |||||||| | |||| |||| || | || Sbjct 5389607 CGCTGTACGAAAAGTACG-AGCGCGAGGGCCGCGGCCGCAAGACGGTCCGCGCCCAGAAG 5389665 Query 53846 GTATGGGATGCAATCCTCAAGAGCCAGGTGGAGACGGGAACGCCGTACATGTGCTACAAG 53905 | ||| | | |||||| || |||| ||||||||| | || | |||| |||||| Sbjct 5389666 CTCTGGTACTCGATCCTCGAGGCCCAGACGGAGACGGGCAACCCCTTCATGCTGTACAAG 5389725 Query 53906 GATTCGGTCAACGAGAAGAGCAACCAGAAGAACATCGG 53943 || || |||| |||||||||||||||||| |||| Sbjct 5389726 GACGCGTGCAACCGCAAGAGCAACCAGAAGAACCTCGG 5389763 Score = 188 bits (208), Expect = 8e-43 Identities = 564/851 (66%), Gaps = 36/851 (4%) Strand=Plus/Plus Query 55097 GACTTTGACAAGCTTCACGAAGTGACGCGTGTTGTGACTCGGAACCTGAACCGGGTCATC 55156 ||||| | ||||| ||||| |||||||| || || || ||||| ||||| ||||| Sbjct 5389888 GACTTCAAGAAGCTGCACGAGGTGACGCGCGTCGTCGTCCGCAACCTCAACCGCATCATC 5389947 Query 55157 GACAAGAATTACTACCCGACTGAAGCGGCGCGCAAGTCCAACCTCCGGCACCGGCCCATC 55216 ||| || ||||||| | | ||||||||| |||| |||| ||||| |||||| Sbjct 5389948 GACGTCAACCACTACCCCGTCCAGGAGGCGCGCAACAGCAACTTCCGCCACCGACCCATC 5390007 Query 55217 GCCATCGGTGTACAGGGCTTGGCCGACATCTTCATGATGCTCGGATTGCCCTTCGACTCG 55276 | | |||| || |||||| | |||||| |||| | ||| | |||||||||| || Sbjct 5390008 GGCGTCGGCGTCCAGGGCCTCGCCGACGCCTTCCTCGCGCTGCGCATGCCCTTCGAGTCC 5390067 Query 55277 GAACCTGCTCGAGAAATTAACCAGGACATCTTC-AGTCGCATCTACTTTGCAGCGCTCGA 55335 || || || | ||| || | |||||| || | ||||||| || || || Sbjct 5390068 CCCGAGGCGCGCGAGCTGAACAAGCAGATCTTCGAGAC-CATCTACCACGCGGCCCTGAC 5390126 Query 55336 GGAGTCGTGTC-ATCTGGCTATG-AGCGAGGGGACCTACGAGACGTTCCGTGATTCGCCA 55393 ||||||| ||| | ||| | | | ||| |||| | ||| ||| || | ||||| Sbjct 5390127 GGAGTCG-GTCGAGCTGTCCAAGGAGC-AGGGCCCGTACTCGACCTTTGAGGGATCGCCG 5390184 Query 55394 GCTGACAAGGGACTTCTCCAGTTCGATCTATGG---GGCAAG---TCTGACCCCAT---- 55443 || |||| | ||||||||||| | ||| | |||| || |||| || Sbjct 5390185 GCCTCGGAGGGCATCCTCCAGTTCGACATGTGGAACGTCAAGCCGTCGGACC--ATTGGG 5390242 Query 55444 -GTTTGACAAGTTGAAGCATGACATTCACTTGTGGGGCCTACGCAACTCCCTGCTCGTGG 55502 || || | | || || || | | ||| | |||||| |||||| | | Sbjct 5390243 AGTGGGAGACGCTGCGCGCCGAGATCAAGGAGCACGGCATCCGCAACAGCCTGCTGCTCG 5390302 Query 55503 CGCCAATGCCAACCGCGTCGACGGCTCAGATCATGGGCAACAACGAGGCGTTCGAGCCGT 55562 |||| ||||| || || ||| | |||||| |||||||||||||| |||||||||| Sbjct 5390303 CGCCGATGCCGACGGCCAGCACGTCGCAGATCCTGGGCAACAACGAGTGCTTCGAGCCGT 5390362 Query 55563 ACACGACCAACATCTACCTGCGCCGGACCCTAGCAGGTGAGTTTGTCATGATCAACAAGC 55622 ||||| |||||||||||| |||||| ||| || || |||||| || ||||| Sbjct 5390363 ACACGTCCAACATCTACCAGCGCCGCGTCCTCGCCGGCGAGTTTCAGGTGGTCAACCCCT 5390422 Query 55623 ACCTCGTCAAGGACCTGCAGAAGATCAACAAGTGGAAC-CCGCAGATCAAGA--CGGAT- 55678 || |||||||||| | || ||| | ||| ||| |||| || || Sbjct 5390423 GGCTGCTCAAGGACCTCGTCGACATGGGACTCTGGTCCGACGC-GATGAAGAACCGCATC 5390481 Query 55679 ATTGTGCGGAACGGGGGGTCCGTCCAGAATCTGG--AGATTCCTCTGCGTC-TCAAGGAG 55735 || | | |||| ||||| ||||||| | | | ||| || | |||||| Sbjct 5390482 ATCGCGGAGAAC---GGGTCGATCCAGAACATTGCCAACATCCCGGCCGACATCAAGGCC 5390538 Query 55736 ATTTACCGGACGGTGTGGGAGATTCCACAGAAGAGTCTGATTGACATGAGTGCTGATCGT 55795 | ||| |||||| ||||||||| | ||| | || | | ||| || || || Sbjct 5390539 CTCTACAAGACGGTCTGGGAGATTTCGCAGCGGCAGGTGGTGCAGATGGCGGCCGACCGC 5390598 Query 55796 GGTGCGTACATCGACCAGTCCCAGTCTCTGAACATCTTCATGGAGAATCCTTCACTGGCC 55855 || || | |||||||||||||||||| || ||||| |||| || | || | ||| | Sbjct 5390599 GGCGCCTTCATCGACCAGTCCCAGTCGCTCAACATTCACATGAAGGACCCGACCATGGGC 5390658 Query 55856 AAGTT---GAGCTCGATGCACTTTTACGGGTGGAAGAAGGGACTCAAGACGGGTATGTAC 55912 ||| | |||| ||||||||| ||| |||||| || ||||||||||| |||||| Sbjct 5390659 AAGATCACGAGC---ATGCACTTTGCCGGCTGGAAGCTCGGCCTCAAGACGGGCATGTAC 5390715 Query 55913 TATCTGCGGAC 55923 || |||||||| Sbjct 5390716 TACCTGCGGAC 5390726 Score = 93.3 bits (102), Expect = 5e-14 Identities = 84/106 (79%), Gaps = 0/106 (0%) Strand=Plus/Plus Query 74805 AGGCCAGGCATAAGTCCACGCTTCTTCAACCAAAAGATGGCACAGAAGGAACCACTGAAG 74864 || |||||||| || || |||||||||| ||| ||||| | ||| | ||| |||||| Sbjct 2598944 AGACCAGGCATGAGACCGCGCTTCTTCAGCCAGAAGATTGAGGCGAAAGCACCGCTGAAG 2599003 Query 74865 AAGATGCCTTCGACACACGCAAAGGCGACAAGGCGTTGCGCGAACG 74910 |||||||||||||| |||||||| ||||| | ||| ||||||| Sbjct 2599004 AAGATGCCTTCGACGGCGGCAAAGGCAACAAGTCTTTGGGCGAACG 2599049 >seq1 Length=12542233 Score = 123 bits (136), Expect = 3e-23 Identities = 211/304 (69%), Gaps = 4/304 (1%) Strand=Plus/Minus Query 117299 AGGCGAGTGAAAATGTAACGAGAGCTTGCAGCATCCTTGCCACCAGCAAGACGCGTACCG 117358 || || || || ||||||| | ||| || || || || || || || || | ||| Sbjct 2158400 AGACGGGTAAATGTGTAACGCGGGCTCGCGGCGTCGGAACCTCCGGCCAGTCGGGAACCA 2158341 Query 117359 AATTGTCCACTCGGCTCCAAGAGGTTCAGGTTGTTGGCGCCCACAAAGTTTTGAGCCAAG 117418 || | || |||||||| | ||| | |||||||| || || || || || |||||| Sbjct 2158340 AAGTTGCCGCTCGGCTCGAGACAGTTGATGTTGTTGGATCCGACGAAATTCTGGGCCAAG 2158281 Query 117419 TTGACAATCGTACCTTGGAGGCTCGCCTCACCATGGTGATACGCCGTCTGCTCCGCCACG 117478 || || || ||||| | |||| || ||||| || ||||||||||||| ||| Sbjct 2158280 CCGATGATGGTCTGCTGGAGCGACACCTCGCCGTGGTGGTAGGCCGTCTGCTCCGAGACG 2158221 Query 117479 TAGCCCGCCAGCTGAGCCACCTTCATGTC--TGACGTCAGGTTCTTCTTGAGGCAGGCAT 117536 || || || || | | |||||| |||| ||||| ||||| ||||| |||||| | Sbjct 2158220 TAACCTGCGAGTTCGACGACCTTCTTGTCCTTGACG--AGGTTTCGCTTGAAGCAGGCGT 2158163 Query 117537 AAATCACCTTGCGCTGACTTGGCTTCAGACCATCCGCCACGTGAGGGATCGAACGCTTGA 117596 |||||||||||||||| |||||||| || || ||| ||||| || ||| || Sbjct 2158162 GCATCACCTTGCGCTGACCAGGCTTCAGGCCGTCGAGAACGGAGGGGATGGATCGCATGT 2158103 Query 117597 TGTC 117600 |||| Sbjct 2158102 TGTC 2158099 Score = 109 bits (120), Expect = 6e-19 Identities = 204/300 (68%), Gaps = 0/300 (0%) Strand=Plus/Minus Query 152025 ACGCGTGAAGATGTATCGGGAGCTGGCCGCATCCTTGCCACCTGCCAGCCGCGTTCCAAA 152084 ||| || || |||| || | ||| || || || || || ||||| || | ||||| Sbjct 2158398 ACGGGTAAATGTGTAACGCGGGCTCGCGGCGTCGGAACCTCCGGCCAGTCGGGAACCAAA 2158339 Query 152085 CTGTCCAGAGGGCTCGAGGAGGTTGAGGTTGTTGGCGCCCACGAAATTCTGAGCCAAATT 152144 | || |||||||| ||||| |||||||| || ||||||||||| ||||| Sbjct 2158338 GTTGCCGCTCGGCTCGAGACAGTTGATGTTGTTGGATCCGACGAAATTCTGGGCCAAGCC 2158279 Query 152145 CACAATCGTGCCCTGCAGACTCGCTTCACCGTGGTGATACGCCGTCTGCTCCGCGATGTA 152204 | || || ||| || | | || |||||||| || ||||||||||||| || ||| Sbjct 2158278 GATGATGGTCTGCTGGAGCGACACCTCGCCGTGGTGGTAGGCCGTCTGCTCCGAGACGTA 2158219 Query 152205 TCCCGCCAACTGCGCCACCTTCATGTCCGTCGTCAGGTTCTTCTTGAGACAGGCGTAAAT 152264 || || | | | |||||| ||||| | ||||| ||||| ||||||| || Sbjct 2158218 ACCTGCGAGTTCGACGACCTTCTTGTCCTTGACGAGGTTTCGCTTGAAGCAGGCGTGCAT 2158159 Query 152265 CACCTTGCGCTGGGATGGTTTCAAACCGTCCACCACGTGAGGAATCGAACGCTTGATGTC 152324 |||||||||||| || |||| ||||| | ||| || || || ||| || |||| Sbjct 2158158 CACCTTGCGCTGACCAGGCTTCAGGCCGTCGAGAACGGAGGGGATGGATCGCATGTTGTC 2158099 Score = 104 bits (114), Expect = 3e-17 Identities = 232/342 (68%), Gaps = 6/342 (2%) Strand=Plus/Minus Query 152769 GTTGAGGACCAAGCCCTTGATGTGCGATCCGTCAAGATCCGCGTCGGTCATGATCATCAG 152828 ||||| || | |||||||||||| ||||| ||||| |||| |||||||||||| Sbjct 2157648 GTTGATGAGGAGGCCCTTGATGTGGCTACCGTCGTGATCCTGATCGGCCATGATCATCAG 2157589 Query 152829 ACGACCGTAGCGCAGGTCACGTAGTGAC-CCGTAGACCTTTCCATGTTGAAGCCCGAGGA 152887 | |||||||| ||| | | | ||| | |||||||| | || | || ||||||| Sbjct 2157588 GTGGCCGTAGCGAAGG-CTCTTGGTGTCGGTGTAGACCTGTTTGTGCTTGAGGCCGAGGA 2157530 Query 152888 TCTTTTTGAGGTTGGAAAATTCCTCATTATCGGTCACCTGTTTCACCGTGGCATCCCGAA 152947 || |||| ||| || |||| || | ||| | ||| | | || ||||| || | Sbjct 2157529 ACTGCTTGATGTTCTGAATCTCCTGGTTCTTGGTGATCTGGTCGATCGACGCATCGCGCA 2157470 Query 152948 CATTGCGCGGCTTTCCCCGGAGTGGAAACACGCCGAACGCGTTGCGG--CCTACAACGCT 153005 | || || ||| || ||||| || || |||||| | ||| | ||| | | ||| Sbjct 2157469 CGTTTAGCATCTTGCCTCGGAGCGGGAAGACGCCG-ATGCGGTCCGGGTCGAGGATGGCT 2157411 Query 153006 CAGACCGGCAATAGCAAGGGCTTTCGCCGAGTCACCCTCGGTGATAATAAGCGTACAGTC 153065 | | |||| | || ||| | || ||||||||||| ||||||| ||| || || || || Sbjct 2157410 C-GTCCGGTCACGGCCAGGCCCTTGGCCGAGTCACCTTCGGTGAGAATGAGGGTGCACTC 2157352 Query 153066 GTGAGACCGATGAGTACCGGCCCAGTTGGCGTCGTCAAGCTT 153107 || || || || ||| ||||||| ||| | ||||| Sbjct 2157351 ATGGCCACGCCTGGTGCCTGCCAAGTTGGCCTCGACGAGCTT 2157310 Score = 86.0 bits (94), Expect = 7e-12 Identities = 196/290 (68%), Gaps = 4/290 (1%) Strand=Plus/Minus Query 118012 GAGCCCCTTGATATGGGAACCGTCCAGATCCGCATCGGTCATGATCATCAGGCGGCCGTA 118071 ||| |||||||| ||| |||||| ||||| ||||| ||||||||||||| ||||||| Sbjct 2157639 GAGGCCCTTGATGTGGCTACCGTCGTGATCCTGATCGGCCATGATCATCAGGTGGCCGTA 2157580 Query 118072 CCGTAAATCTCTCAG-GGAGTTATAAACCTTACCATGTTGGAGCCCGAGGATCTTTTTAA 118130 || || |||| | | | | || |||| || | ||| ||||||| || || | Sbjct 2157579 GCG-AAGGCTCTTGGTGTCGGTGTAGACCTGTTTGTGCTTGAGGCCGAGGAACTGCTTGA 2157521 Query 118131 GGTTGGAAAATTCCTCATTTTCCGTCACCTGTTTTATGGTGGCGTCCCGAACGTTGCGCG 118190 ||| || |||| || | || | ||| | || | || || || ||||| || Sbjct 2157520 TGTTCTGAATCTCCTGGTTCTTGGTGATCTGGTCGATCGACGCATCGCGCACGTTTAGCA 2157461 Query 118191 GCTTACCCCGCAGTGGAAACACGCCAAACTTGTCACGGCCCA-CAACGCTCAAGCCGGCA 118249 ||| || || || || || ||||| | ||| || | | | |||| |||| Sbjct 2157460 TCTTGCCTCGGAGCGGGAAGACGCCGATGCGGTCCGGGTCGAGGATGGCTC-GTCCGGTC 2157402 Query 118250 ATAGCAAGGGCCTTCGCCGAGTCACCCTCGGTAATAATAAGAGTGCACTC 118299 | || ||| |||| ||||||||||| ||||| | ||| || |||||||| Sbjct 2157401 ACGGCCAGGCCCTTGGCCGAGTCACCTTCGGTGAGAATGAGGGTGCACTC 2157352 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 547215808474400