Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Drechmeria_20coniospora_20[genbank_20GCA_5F001625195.1_202016-04-24]
28 sequences; 32,831,003 total letters
Query= NC_028112.1
Length=178262
Score E
Sequences producing significant alignments: (Bits) Value
seq3 462 2e-125
seq1 172 6e-38
>seq3
Length=9751215
Score = 462 bits (512), Expect = 2e-125
Identities = 860/1250 (69%), Gaps = 28/1250 (2%)
Strand=Plus/Minus
Query 80355 AAACTCTCCCGCGAGGGTGCGACGCAGATACAGGTTTGTAGTGTAAGGCTCAAATGCCTC 80414
|||||| || |||||| ||| ||| | || | ||| | ||||| ||||| || |||
Sbjct 5390406 AAACTCGCCGGCGAGGACGCGGCGCTGGTAGATGTTGGACGTGTACGGCTCGAAGCACTC 5390347
Query 80415 GTTGTTTCCGAGGATCTGAGCCGTGCTCGCCGTCGGCATCGGGCCGACCAACAGTGAATT 80474
|||||| || |||||||| | |||||| |||||||||||||| ||| || ||| ||
Sbjct 5390346 GTTGTTGCCCAGGATCTGCGACGTGCTGGCCGTCGGCATCGGCGCGAGCAGCAGGCTGTT 5390287
Query 80475 CCGCAGGCCGTGCTTCTTGATATCCTCGCGCAAA-TCTGACCAAAAATCAACC--CCAAC 80531
|| | |||||||| |||||| || |||||| ||| || | ||| || ||
Sbjct 5390286 GCGGATGCCGTGCTCCTTGATCTCGGCGCGCAGCGTCT--CCCACTCCCAATGGTCCGAC 5390229
Query 80532 GCTGTGACC--CCACATGTCGTGCTGCAAGATGCCCTCCGACGCCGGAGACCCCGCGAAC 80589
| |||| |||||||||| ||| | |||||||||||| ||||| || ||| | ||
Sbjct 5390228 GGCTTGACGTTCCACATGTCGAACTGGAGGATGCCCTCCGAGGCCGGCGATCCCTCAAAG 5390169
Query 80590 GTCTCGTACGGGCCCTCCGTCTTGGCCAGCTCACACGACTCCATAAGGGCCGCGTGATAA 80649
||| ||||||||||| | ||||| |||||| ||||||| | ||||||||||| ||
Sbjct 5390168 GTCGAGTACGGGCCCTGCTCCTTGGACAGCTCGACCGACTCCGTCAGGGCCGCGTGGTAG 5390109
Query 80650 ATGCACTCAAAGACGCCCTTGTTCACACCGCGCGCCTGTGGGTCGTCGAACGACAAGCCC 80709
||| ||| |||| |||||||| ||||||||| ||| ||||| | || || |
Sbjct 5390108 ATGGTCTCGAAGATCTGCTTGTTCAGCTCGCGCGCCTCGGGGGACTCGAAGGGCATGCGC 5390049
Query 80710 ATCATCATGAACACGTCAGCCAGGCCCTGAACGCCGATGGCGATCGGGCGGTGGCGCTTG 80769
| | | ||| |||| || |||||||| ||||||| | |||| || |||||||| |
Sbjct 5390048 AGCGCGAGGAAGGCGTCGGCGAGGCCCTGGACGCCGACGCCGATGGGTCGGTGGCGGAAG 5389989
Query 80770 TT-CGATCGCTCGGCCTCCGGAATTGGGTAAAAGTTATTATCGATGACGCGGTTCAGGTT 80828
|| | | || || ||||| | | ||||| ||| ||||||| |||||| |||||
Sbjct 5389988 TTGCTGTTGCGCG-CCTCCTGGACGGGGTAGTGGTTGACGTCGATGATGCGGTTGAGGTT 5389930
Query 80829 GCGTGTAACAACCCGTGTAACATCATGAAGTTTCTGAAAGTCGAATTGGTTCCCCTTC-- 80886
||| || || || || || || || || |||| |||||| | | | | ||
Sbjct 5389929 GCGGACGACGACGCGCGTCACCTCGTGCAGCTTCTTGAAGTCGTAGCAGCCCTCGTTGTA 5389870
Query 80887 ----ACAAATGCCGGAAGGCTCAGGGACGCCAGATTGCACACGGCCACCTCTTCAGCATC 80942
||||| ||||| ||| || ||||| || ||||| ||||||||||| || | |
Sbjct 5389869 GTCGACAAAGGCCGGCAGGGCGAGCGACGCGAGGTTGCAGACGGCCACCTCGTCGGGCGC 5389810
Query 80943 TGTAAACTCGACGATTTCCGTGCACAAATTAGAAGACTTAATTGTACCCAGGTTTTTCTG 81002
| |||||| ||| || ||||||| || || || || || ||||| |||||
Sbjct 5389809 CGAGTACTCGATGATCTCGGTGCACAGGTTGGAGCTGCGGATCGTCCCGAGGTTCTTCTG 5389750
Query 81003 GTTTGACTTGGCGTTGCAAGCGTCCTTGTAGCACATGTACGGGGTACCGGTCTCGACCTG 81062
||| |||| |||||| ||||||||||| |||| | ||| | || ||||| |||
Sbjct 5389749 GTTGCTCTTGCGGTTGCACGCGTCCTTGTACAGCATGAAGGGGTTGCCCGTCTCCGTCTG 5389690
Query 81063 TGACTTGAGGATGGCGTCCCAAATCTCGCGCGCCTTGACCACCTTGCGGAATTTGCCTTC 81122
| || |||||| | || ||| | || | || |||| ||||||| ||| ||
Sbjct 5389689 GGCCTCGAGGATCGAGTACCAGAGCTTCTGGGCGCGGACCGTCTTGCGGCCGCGGCCCTC 5389630
Query 81123 GGCCACATACTTGGCGTA-AGCTTCGTCGAACTTGGCACCGT-GAAGTTCAGTGAGGTCT 81180
| | | ||||| |||| ||| | ||||||| | | |||| | ||| | | |||| |
Sbjct 5389629 GCGCTCGTACTTTTCGTACAGCGCC-TCGAACTCGTCGCCGTAGCAGT-CGGCGAGGCCG 5389572
Query 81181 GGGCACTCGTTAGGGCACATCAGGTGCCAGTCGGTGTCGTTCTCTACAGCCTTCATGAAA 81240
||||||||||| |||||||| || ||||||| || ||||| || |||||||||
Sbjct 5389571 GGGCACTCGTTGGGGCACATGAGCGTCCAGTCGCCGTTCTTCTCGACGCGCTTCATGAAG 5389512
Query 81241 GCGTCAGGGATCCAGAGGGCGGTGAACAGGTCGCGGCAGCGCGCCTCCTCATCACCCTGG 81300
||| ||||||||||| ||| |||||||||||| |||| ||||||| | || |||
Sbjct 5389511 AGGTCGGGGATCCAGAGCGCGAGGAACAGGTCGCGCGCGCGCACCTCCTCCTTGCCGTGG 5389452
Query 81301 TTGAGGCGCAACTCGAGAAAGTCCATGATGTCCGCATGCCATGGCTCCAGATACACGGCG 81360
|| ||||| |||||||| || | | ||| || ||||| || ||||| || | ||||
Sbjct 5389451 TTCTTGCGCAGGTCGAGAAACTCAAAAACGTCGGCGTGCCACGGTTCCAGGTAGATGGCG 5389392
Query 81361 A------TCGACCCCTTGCGACGGCCACCCTGGTTGACGTAACGGGCAGTCGCGTTAAAT 81414
| || || |||| ||| ||||||| |||||| ||||| || ||| ||
Sbjct 5389391 AAGGCGCCCGGCCGCTTG---TTGCCGCCCTGGTCGACGTACCGGGCCGTGTTGTTGAAG 5389335
Query 81415 ACACGCAACATAGGGATGATACCATCTGACTGACCGTTCGTACCCACGATACGCGACCCC 81474
|| || | ||| || |||| || | || |||||| || || | || || ||
Sbjct 5389334 ACGCGAAGCATGGGCGTGATGCCGTTGGAGGTACCGTTGGTGCCGGCAATGTAGGATCCG 5389275
Query 81475 TTGGCGCGCACCTTGCTGATTGAAAGACCGATGCCACCTGACCACTTTGAAATCTGAGCA 81534
||||||| | | ||| || |||||||| || | | ||| || ||| ||
Sbjct 5389274 GTGGCGCGGATGCGGTGGATGTTGAGGCCGATGCCGCCGGCCATCTTGGAGATCATGGCG 5389215
Query 81535 CACCGGTTCATGGTCTCATAAATTCCCTCGATGCTATCTTTTTTCATGTC 81584
||| || | || || || || ||||||||||| || | ||||||||
Sbjct 5389214 CACGTCTTGAGCGTGTCGTAGATGCCCTCGATGCTGTCGTCCTTCATGTC 5389165
Score = 143 bits (158), Expect = 3e-29
Identities = 172/231 (74%), Gaps = 2/231 (1%)
Strand=Plus/Minus
Query 27406 ATGCAAATCTTTGTCAAGACGCTTACCGGCAAGACTATTACTCTTGAGGTTGAGTCAGGT 27465
||||| ||||| ||||||||| | ||||||||||| || || | ||||| || ||
Sbjct 4593094 ATGCAGATCTTCGTCAAGACGTTGACCGGCAAGACGATCACGTTGGAGGTGGAATCGTCG 4593035
Query 27466 GATAGCATTGCAAATTTGAAGGCTAAAATTCAGGACAAGGAGGGAATTCCTCCAGACCAG 27525
|| | || | || | ||| || ||||||||||||||||| || || || ||||||
Sbjct 4593034 GACACAATCGACAACGTAAAGAGCAAGATTCAGGACAAGGAGGGCATCCCGCCCGACCAG 4592975
Query 27526 CAGCGTCTAATTTTTGCTGGTAAGCAACTCGAGGATGATCGTACCCT-AGCAGACTATAA 27584
||||| || ||||| || || ||||| |||||||| | |||||| | ||| ||||| ||
Sbjct 4592974 CAGCGCCTGATTTTCGCCGGCAAGCAGCTCGAGGACGGCCGTACCTTGAGC-GACTACAA 4592916
Query 27585 TGTCCAAAAGGAATCCACTCTTCATCTAGTCTTGCGTCTTCGCGGTGGACA 27635
|||| ||||| |||||| ||||| || |||| || ||||| || ||
Sbjct 4592915 CATCCAGAAGGAGAGCACTCTACATCTTGTACTGCGCCTGCGCGGCGGCCA 4592865
Score = 140 bits (154), Expect = 4e-28
Identities = 162/216 (75%), Gaps = 2/216 (1%)
Strand=Plus/Minus
Query 27418 GTCAAGACGCTTACCGGCAAGACTATTACTCTTGAGGTTGAGTCAGGTGATAGCATTGCA 27477
|||||||| || || |||||||| || || || ||||| ||||| || | || |
Sbjct 4593310 GTCAAGACACTCACGGGCAAGACCATCACCCTCGAGGTGGAGTCTTCGGACACAATCGAC 4593251
Query 27478 AATTTGAAGGCTAAAATTCAGGACAAGGAGGGAATTCCTCCAGACCAGCAGCGTCTAATT 27537
||| | ||| | || || |||||||||||||| || || || |||||||| || || ||
Sbjct 4593250 AATGTCAAGTCGAAGATCCAGGACAAGGAGGGCATCCCGCCTGACCAGCAACGCCTCATC 4593191
Query 27538 TTTGCTGGTAAGCAACTCGAGGATGATCGTACCCT-AGCAGACTATAATGTCCAAAAGGA 27596
||||| || ||||| |||||||| | || ||||| ||| ||||| || |||| |||||
Sbjct 4593190 TTTGCCGGCAAGCAGCTCGAGGACGGCCGGACCCTGAGC-GACTACAACATCCAGAAGGA 4593132
Query 27597 ATCCACTCTTCATCTAGTCTTGCGTCTTCGCGGTGG 27632
|| || || || || ||| | ||||| ||||||||
Sbjct 4593131 GTCGACGCTCCACCTCGTCCTCCGTCTCCGCGGTGG 4593096
Score = 134 bits (148), Expect = 2e-26
Identities = 168/228 (74%), Gaps = 2/228 (1%)
Strand=Plus/Minus
Query 27406 ATGCAAATCTTTGTCAAGACGCTTACCGGCAAGACTATTACTCTTGAGGTTGAGTCAGGT 27465
||||| || || |||||||| || || || ||||| || || |||||||| |||||
Sbjct 625698 ATGCAGATTTTCGTCAAGACCCTCACGGGGAAGACGATCACCCTTGAGGTGGAGTCTTCC 625639
Query 27466 GATAGCATTGCAAATTTGAAGGCTAAAATTCAGGACAAGGAGGGAATTCCTCCAGACCAG 27525
|| | ||| | || | ||| | || || |||||||||||||| || || || |||||
Sbjct 625638 GACACCATCGACAACGTCAAGTCCAAGATCCAGGACAAGGAGGGCATCCCCCCCGACCAA 625579
Query 27526 CAGCGTCTAATTTTTGCTGGTAAGCAACTCGAGGATGATCGTACCCT-AGCAGACTATAA 27584
||||| || || || || || ||||| |||||||||| || ||||| ||| ||||| ||
Sbjct 625578 CAGCGCCTCATCTTCGCCGGCAAGCAGCTCGAGGATGGCCGCACCCTGAGC-GACTACAA 625520
Query 27585 TGTCCAAAAGGAATCCACTCTTCATCTAGTCTTGCGTCTTCGCGGTGG 27632
|||| ||||| ||| || || || || |||| || || |||||
Sbjct 625519 CATCCAGAAGGAGAGCACCCTGCACCTCGTGCTGCGCCTCCGTGGTGG 625472
Score = 127 bits (140), Expect = 2e-24
Identities = 150/203 (74%), Gaps = 0/203 (0%)
Strand=Plus/Minus
Query 27430 ACCGGCAAGACTATTACTCTTGAGGTTGAGTCAGGTGATAGCATTGCAAATTTGAAGGCT 27489
|| |||||||| || || |||||||| ||||| || | || | ||| | ||| |
Sbjct 4593590 ACGGGCAAGACCATCACGCTTGAGGTCGAGTCGTCGGACACGATCGACAATGTCAAGTCG 4593531
Query 27490 AAAATTCAGGACAAGGAGGGAATTCCTCCAGACCAGCAGCGTCTAATTTTTGCTGGTAAG 27549
|| || |||||||||||||| || ||||| ||||||||||| || ||||| || || |||
Sbjct 4593530 AAGATCCAGGACAAGGAGGGCATCCCTCCCGACCAGCAGCGCCTGATTTTCGCCGGCAAG 4593471
Query 27550 CAACTCGAGGATGATCGTACCCTAGCAGACTATAATGTCCAAAAGGAATCCACTCTTCAT 27609
|| |||||||||| || ||| | | || || || |||| ||||| || || || ||
Sbjct 4593470 CAGCTCGAGGATGGCCGGACCTTGTCCGATTACAACATCCAGAAGGAGTCGACGCTCCAC 4593411
Query 27610 CTAGTCTTGCGTCTTCGCGGTGG 27632
|| ||| | || ||||| || ||
Sbjct 4593410 CTCGTCCTCCGCCTTCGTGGCGG 4593388
Score = 100 bits (110), Expect = 3e-16
Identities = 109/145 (75%), Gaps = 0/145 (0%)
Strand=Plus/Minus
Query 80036 GCGTCCGCAGATAGTACATGCCCGTCTTGAGGCCCTTCTTCCAGCCGTACAGGTGCATAG 80095
|||||||||| ||||||||||||||||||||||| |||||||||| | ||||||
Sbjct 5390728 GCGTCCGCAGGTAGTACATGCCCGTCTTGAGGCCGAGCTTCCAGCCGGCAAAGTGCATGC 5390669
Query 80096 AACTGAGCTTCGCAAGTGTGGGGTTCTCCATGAAGATGTTCAGAGACTGAGACTGACAGA 80155
||| ||| | | || |||| || |||| ||||| || ||||| ||||| ||
Sbjct 5390668 TCGTGATCTTGCCCATGGTCGGGTCCTTCATGTGAATGTTGAGCGACTGGGACTGGTCGA 5390609
Query 80156 TGAAAGCCCCACGATCTGCCGCCAT 80180
|||| || || || || ||||||||
Sbjct 5390608 TGAAGGCGCCGCGGTCGGCCGCCAT 5390584
>seq1
Length=12542233
Score = 172 bits (190), Expect = 6e-38
Identities = 294/421 (70%), Gaps = 4/421 (1%)
Strand=Plus/Plus
Query 31984 GACGGCCTCAAGCCTTCACAGCGCAAGGTGATATACGCCTGCCTCAAGAAGAACCT-GTC 32042
|||||||| |||||| |||||||||||||| |||||||| ||||| ||||| |||
Sbjct 2158129 GACGGCCTGAAGCCTGGTCAGCGCAAGGTGATGCACGCCTGCTTCAAGCGAAACCTCGTC 2158188
Query 32043 GAGTGACATGAAGGTGGCGCAGCTGTCGGGCTACGTGGCAGAGCAAACGGCCTATCACCA 32102
|| |||| |||||| | | || | || ||||| | ||||| |||||||| |||||
Sbjct 2158189 AAG-GACAAGAAGGTCGTCGAACTCGCAGGTTACGTCTCGGAGCAGACGGCCTACCACCA 2158247
Query 32103 CGGCGAGGCGTCGCTCCAGGGCACCATTGTCAACCTTGCTCAGAACTTTGTCGGTGCAAA 32162
|||||||| |||||||||| ||||| || | | || ||||| || ||||| | ||
Sbjct 2158248 CGGCGAGGTGTCGCTCCAGCAGACCATCATCGGCTTGGCCCAGAATTTCGTCGGATCCAA 2158307
Query 32163 TAACCTGAACTTACTCGAGCCATCTGGACAGTTTGGGACCCGGCTCGCCGGTGGCAAGGA 32222
||| | |||| |||||||| || | ||||| |||| || ||||| || ||
Sbjct 2158308 CAACATCAACTGTCTCGAGCCGAGCGGCAACTTTGGTTCCCGACTGGCCGGAGGTTCCGA 2158367
Query 32223 TGCTGCGAGCTCCCGTTACATCTTCACCCGTCTCGCACCTTCGACGCGCAAGATTTTCGA 32282
|| |||||| | ||||||| || ||||||||| | || | |||| ||||| |||
Sbjct 2158368 CGCCGCGAGCCCGCGTTACACATTTACCCGTCTCTCGCCCTTTGCGCGGAAGATCTTCTC 2158427
Query 32283 C-CCGTCGGACGATGCGGTGCTCAAGTACAATTTTGATGACGGTCAGCGGGTCGAGCCGG 32341
| || || ||||| || |||||| | | || || || ||| | |||| |||
Sbjct 2158428 CGCCCTC-GACGAGCCGAACCTCAAGCCTCAGTACGACGATGGGAAGCCGATCGAACCGA 2158486
Query 32342 TGTTCTACAGTCCGGTGCTTCCGATGATCTTGGTGAACGGTGCAGAAGGCATCGGAACGG 32401
| | ||| || | | || ||| | | || ||||| || || |||||||| || |
Sbjct 2158487 CGGTGTACTCGCCCATCATCCCCATGGTGCTCGTCAACGGCGCCGACGGCATCGGCACAG 2158546
Query 32402 G 32402
|
Sbjct 2158547 G 2158547
Score = 111 bits (122), Expect = 2e-19
Identities = 133/181 (73%), Gaps = 0/181 (0%)
Strand=Plus/Minus
Query 27415 TTTGTCAAGACGCTTACCGGCAAGACTATTACTCTTGAGGTTGAGTCAGGTGATAGCATT 27474
|| || ||||| || || |||||||| ||||| ||||| || ||||| ||| | ||
Sbjct 3488468 TTCGTGAAGACCCTAACGGGCAAGACGATTACGCTTGAAGTCGAGTCTTCTGACACTATC 3488409
Query 27475 GCAAATTTGAAGGCTAAAATTCAGGACAAGGAGGGAATTCCTCCAGACCAGCAGCGTCTA 27534
| ||| | ||| | || || |||||||||||||| ||||| || || ||||| | |
Sbjct 3488408 GACAATGTCAAGTCCAAGATCCAGGACAAGGAGGGCATTCCCCCGGATCAGCAAAGATTG 3488349
Query 27535 ATTTTTGCTGGTAAGCAACTCGAGGATGATCGTACCCTAGCAGACTATAATGTCCAAAAG 27594
|| |||||||||||||| ||||| |||| || || | | ||||| || |||| |||
Sbjct 3488348 ATCTTTGCTGGTAAGCAGCTCGAAGATGGACGGACTTTGTCGGACTACAACATCCAGAAG 3488289
Query 27595 G 27595
|
Sbjct 3488288 G 3488288
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 570310200391360
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