Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Drechmeria_20coniospora_20[genbank_20GCA_5F001625195.1_202016-04-24] 28 sequences; 32,831,003 total letters Query= NC_028112.1 Length=178262 Score E Sequences producing significant alignments: (Bits) Value seq3 462 2e-125 seq1 172 6e-38 >seq3 Length=9751215 Score = 462 bits (512), Expect = 2e-125 Identities = 860/1250 (69%), Gaps = 28/1250 (2%) Strand=Plus/Minus Query 80355 AAACTCTCCCGCGAGGGTGCGACGCAGATACAGGTTTGTAGTGTAAGGCTCAAATGCCTC 80414 |||||| || |||||| ||| ||| | || | ||| | ||||| ||||| || ||| Sbjct 5390406 AAACTCGCCGGCGAGGACGCGGCGCTGGTAGATGTTGGACGTGTACGGCTCGAAGCACTC 5390347 Query 80415 GTTGTTTCCGAGGATCTGAGCCGTGCTCGCCGTCGGCATCGGGCCGACCAACAGTGAATT 80474 |||||| || |||||||| | |||||| |||||||||||||| ||| || ||| || Sbjct 5390346 GTTGTTGCCCAGGATCTGCGACGTGCTGGCCGTCGGCATCGGCGCGAGCAGCAGGCTGTT 5390287 Query 80475 CCGCAGGCCGTGCTTCTTGATATCCTCGCGCAAA-TCTGACCAAAAATCAACC--CCAAC 80531 || | |||||||| |||||| || |||||| ||| || | ||| || || Sbjct 5390286 GCGGATGCCGTGCTCCTTGATCTCGGCGCGCAGCGTCT--CCCACTCCCAATGGTCCGAC 5390229 Query 80532 GCTGTGACC--CCACATGTCGTGCTGCAAGATGCCCTCCGACGCCGGAGACCCCGCGAAC 80589 | |||| |||||||||| ||| | |||||||||||| ||||| || ||| | || Sbjct 5390228 GGCTTGACGTTCCACATGTCGAACTGGAGGATGCCCTCCGAGGCCGGCGATCCCTCAAAG 5390169 Query 80590 GTCTCGTACGGGCCCTCCGTCTTGGCCAGCTCACACGACTCCATAAGGGCCGCGTGATAA 80649 ||| ||||||||||| | ||||| |||||| ||||||| | ||||||||||| || Sbjct 5390168 GTCGAGTACGGGCCCTGCTCCTTGGACAGCTCGACCGACTCCGTCAGGGCCGCGTGGTAG 5390109 Query 80650 ATGCACTCAAAGACGCCCTTGTTCACACCGCGCGCCTGTGGGTCGTCGAACGACAAGCCC 80709 ||| ||| |||| |||||||| ||||||||| ||| ||||| | || || | Sbjct 5390108 ATGGTCTCGAAGATCTGCTTGTTCAGCTCGCGCGCCTCGGGGGACTCGAAGGGCATGCGC 5390049 Query 80710 ATCATCATGAACACGTCAGCCAGGCCCTGAACGCCGATGGCGATCGGGCGGTGGCGCTTG 80769 | | | ||| |||| || |||||||| ||||||| | |||| || |||||||| | Sbjct 5390048 AGCGCGAGGAAGGCGTCGGCGAGGCCCTGGACGCCGACGCCGATGGGTCGGTGGCGGAAG 5389989 Query 80770 TT-CGATCGCTCGGCCTCCGGAATTGGGTAAAAGTTATTATCGATGACGCGGTTCAGGTT 80828 || | | || || ||||| | | ||||| ||| ||||||| |||||| ||||| Sbjct 5389988 TTGCTGTTGCGCG-CCTCCTGGACGGGGTAGTGGTTGACGTCGATGATGCGGTTGAGGTT 5389930 Query 80829 GCGTGTAACAACCCGTGTAACATCATGAAGTTTCTGAAAGTCGAATTGGTTCCCCTTC-- 80886 ||| || || || || || || || || |||| |||||| | | | | || Sbjct 5389929 GCGGACGACGACGCGCGTCACCTCGTGCAGCTTCTTGAAGTCGTAGCAGCCCTCGTTGTA 5389870 Query 80887 ----ACAAATGCCGGAAGGCTCAGGGACGCCAGATTGCACACGGCCACCTCTTCAGCATC 80942 ||||| ||||| ||| || ||||| || ||||| ||||||||||| || | | Sbjct 5389869 GTCGACAAAGGCCGGCAGGGCGAGCGACGCGAGGTTGCAGACGGCCACCTCGTCGGGCGC 5389810 Query 80943 TGTAAACTCGACGATTTCCGTGCACAAATTAGAAGACTTAATTGTACCCAGGTTTTTCTG 81002 | |||||| ||| || ||||||| || || || || || ||||| ||||| Sbjct 5389809 CGAGTACTCGATGATCTCGGTGCACAGGTTGGAGCTGCGGATCGTCCCGAGGTTCTTCTG 5389750 Query 81003 GTTTGACTTGGCGTTGCAAGCGTCCTTGTAGCACATGTACGGGGTACCGGTCTCGACCTG 81062 ||| |||| |||||| ||||||||||| |||| | ||| | || ||||| ||| Sbjct 5389749 GTTGCTCTTGCGGTTGCACGCGTCCTTGTACAGCATGAAGGGGTTGCCCGTCTCCGTCTG 5389690 Query 81063 TGACTTGAGGATGGCGTCCCAAATCTCGCGCGCCTTGACCACCTTGCGGAATTTGCCTTC 81122 | || |||||| | || ||| | || | || |||| ||||||| ||| || Sbjct 5389689 GGCCTCGAGGATCGAGTACCAGAGCTTCTGGGCGCGGACCGTCTTGCGGCCGCGGCCCTC 5389630 Query 81123 GGCCACATACTTGGCGTA-AGCTTCGTCGAACTTGGCACCGT-GAAGTTCAGTGAGGTCT 81180 | | | ||||| |||| ||| | ||||||| | | |||| | ||| | | |||| | Sbjct 5389629 GCGCTCGTACTTTTCGTACAGCGCC-TCGAACTCGTCGCCGTAGCAGT-CGGCGAGGCCG 5389572 Query 81181 GGGCACTCGTTAGGGCACATCAGGTGCCAGTCGGTGTCGTTCTCTACAGCCTTCATGAAA 81240 ||||||||||| |||||||| || ||||||| || ||||| || ||||||||| Sbjct 5389571 GGGCACTCGTTGGGGCACATGAGCGTCCAGTCGCCGTTCTTCTCGACGCGCTTCATGAAG 5389512 Query 81241 GCGTCAGGGATCCAGAGGGCGGTGAACAGGTCGCGGCAGCGCGCCTCCTCATCACCCTGG 81300 ||| ||||||||||| ||| |||||||||||| |||| ||||||| | || ||| Sbjct 5389511 AGGTCGGGGATCCAGAGCGCGAGGAACAGGTCGCGCGCGCGCACCTCCTCCTTGCCGTGG 5389452 Query 81301 TTGAGGCGCAACTCGAGAAAGTCCATGATGTCCGCATGCCATGGCTCCAGATACACGGCG 81360 || ||||| |||||||| || | | ||| || ||||| || ||||| || | |||| Sbjct 5389451 TTCTTGCGCAGGTCGAGAAACTCAAAAACGTCGGCGTGCCACGGTTCCAGGTAGATGGCG 5389392 Query 81361 A------TCGACCCCTTGCGACGGCCACCCTGGTTGACGTAACGGGCAGTCGCGTTAAAT 81414 | || || |||| ||| ||||||| |||||| ||||| || ||| || Sbjct 5389391 AAGGCGCCCGGCCGCTTG---TTGCCGCCCTGGTCGACGTACCGGGCCGTGTTGTTGAAG 5389335 Query 81415 ACACGCAACATAGGGATGATACCATCTGACTGACCGTTCGTACCCACGATACGCGACCCC 81474 || || | ||| || |||| || | || |||||| || || | || || || Sbjct 5389334 ACGCGAAGCATGGGCGTGATGCCGTTGGAGGTACCGTTGGTGCCGGCAATGTAGGATCCG 5389275 Query 81475 TTGGCGCGCACCTTGCTGATTGAAAGACCGATGCCACCTGACCACTTTGAAATCTGAGCA 81534 ||||||| | | ||| || |||||||| || | | ||| || ||| || Sbjct 5389274 GTGGCGCGGATGCGGTGGATGTTGAGGCCGATGCCGCCGGCCATCTTGGAGATCATGGCG 5389215 Query 81535 CACCGGTTCATGGTCTCATAAATTCCCTCGATGCTATCTTTTTTCATGTC 81584 ||| || | || || || || ||||||||||| || | |||||||| Sbjct 5389214 CACGTCTTGAGCGTGTCGTAGATGCCCTCGATGCTGTCGTCCTTCATGTC 5389165 Score = 143 bits (158), Expect = 3e-29 Identities = 172/231 (74%), Gaps = 2/231 (1%) Strand=Plus/Minus Query 27406 ATGCAAATCTTTGTCAAGACGCTTACCGGCAAGACTATTACTCTTGAGGTTGAGTCAGGT 27465 ||||| ||||| ||||||||| | ||||||||||| || || | ||||| || || Sbjct 4593094 ATGCAGATCTTCGTCAAGACGTTGACCGGCAAGACGATCACGTTGGAGGTGGAATCGTCG 4593035 Query 27466 GATAGCATTGCAAATTTGAAGGCTAAAATTCAGGACAAGGAGGGAATTCCTCCAGACCAG 27525 || | || | || | ||| || ||||||||||||||||| || || || |||||| Sbjct 4593034 GACACAATCGACAACGTAAAGAGCAAGATTCAGGACAAGGAGGGCATCCCGCCCGACCAG 4592975 Query 27526 CAGCGTCTAATTTTTGCTGGTAAGCAACTCGAGGATGATCGTACCCT-AGCAGACTATAA 27584 ||||| || ||||| || || ||||| |||||||| | |||||| | ||| ||||| || Sbjct 4592974 CAGCGCCTGATTTTCGCCGGCAAGCAGCTCGAGGACGGCCGTACCTTGAGC-GACTACAA 4592916 Query 27585 TGTCCAAAAGGAATCCACTCTTCATCTAGTCTTGCGTCTTCGCGGTGGACA 27635 |||| ||||| |||||| ||||| || |||| || ||||| || || Sbjct 4592915 CATCCAGAAGGAGAGCACTCTACATCTTGTACTGCGCCTGCGCGGCGGCCA 4592865 Score = 140 bits (154), Expect = 4e-28 Identities = 162/216 (75%), Gaps = 2/216 (1%) Strand=Plus/Minus Query 27418 GTCAAGACGCTTACCGGCAAGACTATTACTCTTGAGGTTGAGTCAGGTGATAGCATTGCA 27477 |||||||| || || |||||||| || || || ||||| ||||| || | || | Sbjct 4593310 GTCAAGACACTCACGGGCAAGACCATCACCCTCGAGGTGGAGTCTTCGGACACAATCGAC 4593251 Query 27478 AATTTGAAGGCTAAAATTCAGGACAAGGAGGGAATTCCTCCAGACCAGCAGCGTCTAATT 27537 ||| | ||| | || || |||||||||||||| || || || |||||||| || || || Sbjct 4593250 AATGTCAAGTCGAAGATCCAGGACAAGGAGGGCATCCCGCCTGACCAGCAACGCCTCATC 4593191 Query 27538 TTTGCTGGTAAGCAACTCGAGGATGATCGTACCCT-AGCAGACTATAATGTCCAAAAGGA 27596 ||||| || ||||| |||||||| | || ||||| ||| ||||| || |||| ||||| Sbjct 4593190 TTTGCCGGCAAGCAGCTCGAGGACGGCCGGACCCTGAGC-GACTACAACATCCAGAAGGA 4593132 Query 27597 ATCCACTCTTCATCTAGTCTTGCGTCTTCGCGGTGG 27632 || || || || || ||| | ||||| |||||||| Sbjct 4593131 GTCGACGCTCCACCTCGTCCTCCGTCTCCGCGGTGG 4593096 Score = 134 bits (148), Expect = 2e-26 Identities = 168/228 (74%), Gaps = 2/228 (1%) Strand=Plus/Minus Query 27406 ATGCAAATCTTTGTCAAGACGCTTACCGGCAAGACTATTACTCTTGAGGTTGAGTCAGGT 27465 ||||| || || |||||||| || || || ||||| || || |||||||| ||||| Sbjct 625698 ATGCAGATTTTCGTCAAGACCCTCACGGGGAAGACGATCACCCTTGAGGTGGAGTCTTCC 625639 Query 27466 GATAGCATTGCAAATTTGAAGGCTAAAATTCAGGACAAGGAGGGAATTCCTCCAGACCAG 27525 || | ||| | || | ||| | || || |||||||||||||| || || || ||||| Sbjct 625638 GACACCATCGACAACGTCAAGTCCAAGATCCAGGACAAGGAGGGCATCCCCCCCGACCAA 625579 Query 27526 CAGCGTCTAATTTTTGCTGGTAAGCAACTCGAGGATGATCGTACCCT-AGCAGACTATAA 27584 ||||| || || || || || ||||| |||||||||| || ||||| ||| ||||| || Sbjct 625578 CAGCGCCTCATCTTCGCCGGCAAGCAGCTCGAGGATGGCCGCACCCTGAGC-GACTACAA 625520 Query 27585 TGTCCAAAAGGAATCCACTCTTCATCTAGTCTTGCGTCTTCGCGGTGG 27632 |||| ||||| ||| || || || || |||| || || ||||| Sbjct 625519 CATCCAGAAGGAGAGCACCCTGCACCTCGTGCTGCGCCTCCGTGGTGG 625472 Score = 127 bits (140), Expect = 2e-24 Identities = 150/203 (74%), Gaps = 0/203 (0%) Strand=Plus/Minus Query 27430 ACCGGCAAGACTATTACTCTTGAGGTTGAGTCAGGTGATAGCATTGCAAATTTGAAGGCT 27489 || |||||||| || || |||||||| ||||| || | || | ||| | ||| | Sbjct 4593590 ACGGGCAAGACCATCACGCTTGAGGTCGAGTCGTCGGACACGATCGACAATGTCAAGTCG 4593531 Query 27490 AAAATTCAGGACAAGGAGGGAATTCCTCCAGACCAGCAGCGTCTAATTTTTGCTGGTAAG 27549 || || |||||||||||||| || ||||| ||||||||||| || ||||| || || ||| Sbjct 4593530 AAGATCCAGGACAAGGAGGGCATCCCTCCCGACCAGCAGCGCCTGATTTTCGCCGGCAAG 4593471 Query 27550 CAACTCGAGGATGATCGTACCCTAGCAGACTATAATGTCCAAAAGGAATCCACTCTTCAT 27609 || |||||||||| || ||| | | || || || |||| ||||| || || || || Sbjct 4593470 CAGCTCGAGGATGGCCGGACCTTGTCCGATTACAACATCCAGAAGGAGTCGACGCTCCAC 4593411 Query 27610 CTAGTCTTGCGTCTTCGCGGTGG 27632 || ||| | || ||||| || || Sbjct 4593410 CTCGTCCTCCGCCTTCGTGGCGG 4593388 Score = 100 bits (110), Expect = 3e-16 Identities = 109/145 (75%), Gaps = 0/145 (0%) Strand=Plus/Minus Query 80036 GCGTCCGCAGATAGTACATGCCCGTCTTGAGGCCCTTCTTCCAGCCGTACAGGTGCATAG 80095 |||||||||| ||||||||||||||||||||||| |||||||||| | |||||| Sbjct 5390728 GCGTCCGCAGGTAGTACATGCCCGTCTTGAGGCCGAGCTTCCAGCCGGCAAAGTGCATGC 5390669 Query 80096 AACTGAGCTTCGCAAGTGTGGGGTTCTCCATGAAGATGTTCAGAGACTGAGACTGACAGA 80155 ||| ||| | | || |||| || |||| ||||| || ||||| ||||| || Sbjct 5390668 TCGTGATCTTGCCCATGGTCGGGTCCTTCATGTGAATGTTGAGCGACTGGGACTGGTCGA 5390609 Query 80156 TGAAAGCCCCACGATCTGCCGCCAT 80180 |||| || || || || |||||||| Sbjct 5390608 TGAAGGCGCCGCGGTCGGCCGCCAT 5390584 >seq1 Length=12542233 Score = 172 bits (190), Expect = 6e-38 Identities = 294/421 (70%), Gaps = 4/421 (1%) Strand=Plus/Plus Query 31984 GACGGCCTCAAGCCTTCACAGCGCAAGGTGATATACGCCTGCCTCAAGAAGAACCT-GTC 32042 |||||||| |||||| |||||||||||||| |||||||| ||||| ||||| ||| Sbjct 2158129 GACGGCCTGAAGCCTGGTCAGCGCAAGGTGATGCACGCCTGCTTCAAGCGAAACCTCGTC 2158188 Query 32043 GAGTGACATGAAGGTGGCGCAGCTGTCGGGCTACGTGGCAGAGCAAACGGCCTATCACCA 32102 || |||| |||||| | | || | || ||||| | ||||| |||||||| ||||| Sbjct 2158189 AAG-GACAAGAAGGTCGTCGAACTCGCAGGTTACGTCTCGGAGCAGACGGCCTACCACCA 2158247 Query 32103 CGGCGAGGCGTCGCTCCAGGGCACCATTGTCAACCTTGCTCAGAACTTTGTCGGTGCAAA 32162 |||||||| |||||||||| ||||| || | | || ||||| || ||||| | || Sbjct 2158248 CGGCGAGGTGTCGCTCCAGCAGACCATCATCGGCTTGGCCCAGAATTTCGTCGGATCCAA 2158307 Query 32163 TAACCTGAACTTACTCGAGCCATCTGGACAGTTTGGGACCCGGCTCGCCGGTGGCAAGGA 32222 ||| | |||| |||||||| || | ||||| |||| || ||||| || || Sbjct 2158308 CAACATCAACTGTCTCGAGCCGAGCGGCAACTTTGGTTCCCGACTGGCCGGAGGTTCCGA 2158367 Query 32223 TGCTGCGAGCTCCCGTTACATCTTCACCCGTCTCGCACCTTCGACGCGCAAGATTTTCGA 32282 || |||||| | ||||||| || ||||||||| | || | |||| ||||| ||| Sbjct 2158368 CGCCGCGAGCCCGCGTTACACATTTACCCGTCTCTCGCCCTTTGCGCGGAAGATCTTCTC 2158427 Query 32283 C-CCGTCGGACGATGCGGTGCTCAAGTACAATTTTGATGACGGTCAGCGGGTCGAGCCGG 32341 | || || ||||| || |||||| | | || || || ||| | |||| ||| Sbjct 2158428 CGCCCTC-GACGAGCCGAACCTCAAGCCTCAGTACGACGATGGGAAGCCGATCGAACCGA 2158486 Query 32342 TGTTCTACAGTCCGGTGCTTCCGATGATCTTGGTGAACGGTGCAGAAGGCATCGGAACGG 32401 | | ||| || | | || ||| | | || ||||| || || |||||||| || | Sbjct 2158487 CGGTGTACTCGCCCATCATCCCCATGGTGCTCGTCAACGGCGCCGACGGCATCGGCACAG 2158546 Query 32402 G 32402 | Sbjct 2158547 G 2158547 Score = 111 bits (122), Expect = 2e-19 Identities = 133/181 (73%), Gaps = 0/181 (0%) Strand=Plus/Minus Query 27415 TTTGTCAAGACGCTTACCGGCAAGACTATTACTCTTGAGGTTGAGTCAGGTGATAGCATT 27474 || || ||||| || || |||||||| ||||| ||||| || ||||| ||| | || Sbjct 3488468 TTCGTGAAGACCCTAACGGGCAAGACGATTACGCTTGAAGTCGAGTCTTCTGACACTATC 3488409 Query 27475 GCAAATTTGAAGGCTAAAATTCAGGACAAGGAGGGAATTCCTCCAGACCAGCAGCGTCTA 27534 | ||| | ||| | || || |||||||||||||| ||||| || || ||||| | | Sbjct 3488408 GACAATGTCAAGTCCAAGATCCAGGACAAGGAGGGCATTCCCCCGGATCAGCAAAGATTG 3488349 Query 27535 ATTTTTGCTGGTAAGCAACTCGAGGATGATCGTACCCTAGCAGACTATAATGTCCAAAAG 27594 || |||||||||||||| ||||| |||| || || | | ||||| || |||| ||| Sbjct 3488348 ATCTTTGCTGGTAAGCAGCTCGAAGATGGACGGACTTTGTCGGACTACAACATCCAGAAG 3488289 Query 27595 G 27595 | Sbjct 3488288 G 3488288 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 570310200391360