Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Drechmeria_20coniospora_20[genbank_20GCA_5F001625195.1_202016-04-24]
28 sequences; 32,831,003 total letters
Query= NC_029692.1
Length=362276
Score E
Sequences producing significant alignments: (Bits) Value
seq3 167 5e-36
seq1 120 7e-22
>seq3
Length=9751215
Score = 167 bits (184), Expect = 5e-36
Identities = 166/215 (77%), Gaps = 0/215 (0%)
Strand=Plus/Plus
Query 210903 AGGACAAGGTGAAGAGTGGACTCTTTTTGGATGTTATAATCCGCAAGGGTCCTTCCATCT 210962
|| || ||||| || ||| ||| || |||||||| || || ||||| | |||||
Sbjct 625487 AGCACGAGGTGCAGGGTGCTCTCCTTCTGGATGTTGTAGTCGCTCAGGGTGCGGCCATCC 625546
Query 210963 TCCAGCTGCTTGCCTGCGAAGATAAGGCGTTGTTGGTCAGGAGGAACTCCTTCCTTGTCC 211022
|| ||||||||||| |||||||| ||||| |||||||| || || | || |||||||||
Sbjct 625547 TCGAGCTGCTTGCCGGCGAAGATGAGGCGCTGTTGGTCGGGGGGGATGCCCTCCTTGTCC 625606
Query 211023 TGGATCTTTTGTTTCACGTTTTCGATGGTGTCAGAGCTTTCAACCTCGAGAGTGATCGTC 211082
|||||||| || ||||| ||||||||||| || || ||||| || |||||||||
Sbjct 625607 TGGATCTTGGACTTGACGTTGTCGATGGTGTCGGAAGACTCCACCTCAAGGGTGATCGTC 625666
Query 211083 TTTCCCGTGAGAGTCTTTACAAACACCTGCATTTT 211117
|| |||||||| ||||| || || | |||||| ||
Sbjct 625667 TTCCCCGTGAGGGTCTTGACGAAAATCTGCATCTT 625701
Score = 158 bits (174), Expect = 3e-33
Identities = 155/200 (78%), Gaps = 0/200 (0%)
Strand=Plus/Plus
Query 210903 AGGACAAGGTGAAGAGTGGACTCTTTTTGGATGTTATAATCCGCAAGGGTCCTTCCATCT 210962
||||| ||||| || || ||||| || |||||||| || || ||||||| || ||
Sbjct 4593111 AGGACGAGGTGGAGCGTCGACTCCTTCTGGATGTTGTAGTCGCTCAGGGTCCGGCCGTCC 4593170
Query 210963 TCCAGCTGCTTGCCTGCGAAGATAAGGCGTTGTTGGTCAGGAGGAACTCCTTCCTTGTCC 211022
|| ||||||||||| || ||||| |||||||| |||||||| || | || |||||||||
Sbjct 4593171 TCGAGCTGCTTGCCGGCAAAGATGAGGCGTTGCTGGTCAGGCGGGATGCCCTCCTTGTCC 4593230
Query 211023 TGGATCTTTTGTTTCACGTTTTCGATGGTGTCAGAGCTTTCAACCTCGAGAGTGATCGTC 211082
|||||||| || || || ||||| ||||| || || |||||||| ||||| |||
Sbjct 4593231 TGGATCTTCGACTTGACATTGTCGATTGTGTCCGAAGACTCCACCTCGAGGGTGATGGTC 4593290
Query 211083 TTTCCCGTGAGAGTCTTTAC 211102
|| |||||||| ||||| ||
Sbjct 4593291 TTGCCCGTGAGTGTCTTGAC 4593310
Score = 154 bits (170), Expect = 3e-32
Identities = 154/200 (77%), Gaps = 0/200 (0%)
Strand=Plus/Plus
Query 210893 ACGAAGTCTTAGGACAAGGTGAAGAGTGGACTCTTTTTGGATGTTATAATCCGCAAGGGT 210952
|||||| | ||||| ||||| || || ||||| || |||||||| ||||| | | |||
Sbjct 4593393 ACGAAGGCGGAGGACGAGGTGGAGCGTCGACTCCTTCTGGATGTTGTAATCGGACAAGGT 4593452
Query 210953 CCTTCCATCTTCCAGCTGCTTGCCTGCGAAGATAAGGCGTTGTTGGTCAGGAGGAACTCC 211012
|| ||||| || ||||||||||| ||||| || ||||| || ||||| ||||| | ||
Sbjct 4593453 CCGGCCATCCTCGAGCTGCTTGCCGGCGAAAATCAGGCGCTGCTGGTCGGGAGGGATGCC 4593512
Query 211013 TTCCTTGTCCTGGATCTTTTGTTTCACGTTTTCGATGGTGTCAGAGCTTTCAACCTCGAG 211072
||||||||||||||||| || || || ||||| ||||| || || ||||| ||
Sbjct 4593513 CTCCTTGTCCTGGATCTTCGACTTGACATTGTCGATCGTGTCCGACGACTCGACCTCAAG 4593572
Query 211073 AGTGATCGTCTTTCCCGTGA 211092
||||| ||||| |||||||
Sbjct 4593573 CGTGATGGTCTTGCCCGTGA 4593592
Score = 134 bits (148), Expect = 3e-26
Identities = 159/213 (75%), Gaps = 2/213 (1%)
Strand=Plus/Plus
Query 210903 AGGACAAGGTGAAGAGTGGACTCTTTTTGGATGTTATAATC-CGCAAGGGTCCTTCCATC 210961
|| ||||| || |||||| ||| || |||||||| || || | ||||| | | || ||
Sbjct 4592883 AGTACAAGATGTAGAGTGCTCTCCTTCTGGATGTTGTAGTCGCTCAAGG-TACGGCCGTC 4592941
Query 210962 TTCCAGCTGCTTGCCTGCGAAGATAAGGCGTTGTTGGTCAGGAGGAACTCCTTCCTTGTC 211021
|| ||||||||||| ||||| || ||||| || ||||| || || | || ||||||||
Sbjct 4592942 CTCGAGCTGCTTGCCGGCGAAAATCAGGCGCTGCTGGTCGGGCGGGATGCCCTCCTTGTC 4593001
Query 211022 CTGGATCTTTTGTTTCACGTTTTCGATGGTGTCAGAGCTTTCAACCTCGAGAGTGATCGT 211081
||| ||||| || ||||| ||||| ||||| || ||| ||||| | ||||||||
Sbjct 4593002 CTGAATCTTGCTCTTTACGTTGTCGATTGTGTCCGACGATTCCACCTCCAACGTGATCGT 4593061
Query 211082 CTTTCCCGTGAGAGTCTTTACAAACACCTGCAT 211114
||| || || | ||||| || || | ||||||
Sbjct 4593062 CTTGCCGGTCAACGTCTTGACGAAGATCTGCAT 4593094
Score = 107 bits (118), Expect = 4e-18
Identities = 184/266 (69%), Gaps = 6/266 (2%)
Strand=Plus/Minus
Query 178093 GTTCTTTTGGTTGCTCTTTC---TGCAAATGGCATCTTTGTACGCAATGAAGGGCATTCC 178149
|||||| ||||||||||| | |||| || || |||||| |||||||| | ||
Sbjct 5389758 GTTCTTCTGGTTGCTCTTGCGGTTGCAC---GCGTCCTTGTACAGCATGAAGGGGTTGCC 5389702
Query 178150 CACCTCAGCTTGAGCCACGAGAATGTGATGCCAAAGCTCCTGGGCTCGGACAGTCTTTTT 178209
| ||| | || ||| |||| || | ||| |||| |||||| ||||| |||||
Sbjct 5389701 CGTCTCCGTCTGGGCCTCGAGGATCGAGTACCAGAGCTTCTGGGCGCGGACCGTCTTGCG 5389642
Query 178210 GGCTTTTCCTTCATTCTCGTACTTTTTGTAGAGCTCCTCGAATTCCGGTCCATAGACATC 178269
| | || || ||||||||||| ||| ||| ||||||| || || ||| ||
Sbjct 5389641 GCCGCGGCCCTCGCGCTCGTACTTTTCGTACAGCGCCTCGAACTCGTCGCCGTAGCAGTC 5389582
Query 178270 ATCGAGACCGGGAGCCTCATTGGGGCAGAAGAGACTCCACTGACCGTCTTCCTTCACTCG 178329
|||| ||||| ||| |||||||| | ||| |||| | |||| | || || ||
Sbjct 5389581 GGCGAGGCCGGGGCACTCGTTGGGGCACATGAGCGTCCAGTCGCCGTTCTTCTCGACGCG 5389522
Query 178330 TTTCATGAAGAGGTCAGAGGTCCAGA 178355
|||||||||||||| | | ||||||
Sbjct 5389521 CTTCATGAAGAGGTCGGGGATCCAGA 5389496
>seq1
Length=12542233
Score = 120 bits (132), Expect = 7e-22
Identities = 134/179 (75%), Gaps = 0/179 (0%)
Strand=Plus/Plus
Query 210927 TTTTGGATGTTATAATCCGCAAGGGTCCTTCCATCTTCCAGCTGCTTGCCTGCGAAGATA 210986
|| |||||||| || |||| | |||| ||||||||| |||||||| || || |||||
Sbjct 3488290 TTCTGGATGTTGTAGTCCGACAAAGTCCGTCCATCTTCGAGCTGCTTACCAGCAAAGATC 3488349
Query 210987 AGGCGTTGTTGGTCAGGAGGAACTCCTTCCTTGTCCTGGATCTTTTGTTTCACGTTTTCG 211046
| | ||| || || || |||| || ||||||||||||||||| || || || |||
Sbjct 3488350 AATCTTTGCTGATCCGGGGGAATGCCCTCCTTGTCCTGGATCTTGGACTTGACATTGTCG 3488409
Query 211047 ATGGTGTCAGAGCTTTCAACCTCGAGAGTGATCGTCTTTCCCGTGAGAGTCTTTACAAA 211105
|| |||||||| || || || || || |||||||| ||||| || ||||| || ||
Sbjct 3488410 ATAGTGTCAGAAGACTCGACTTCAAGCGTAATCGTCTTGCCCGTTAGGGTCTTCACGAA 3488468
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 1159151584154220
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |