Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Drechmeria_20coniospora_20[genbank_20GCA_5F001625195.1_202016-04-24] 28 sequences; 32,831,003 total letters Query= NC_030230.1 Length=372707 Score E Sequences producing significant alignments: (Bits) Value seq3 145 2e-29 seq1 120 7e-22 >seq3 Length=9751215 Score = 145 bits (160), Expect = 2e-29 Identities = 151/198 (76%), Gaps = 0/198 (0%) Strand=Plus/Plus Query 225492 ACGAAGTCTCAGGACAAGGTGGAGAGTGGATTCTTTTTGGACATTGTAATCGGCCAAAGT 225551 |||||| | ||||| |||||||| || || || || |||| |||||||||| ||| || Sbjct 4593393 ACGAAGGCGGAGGACGAGGTGGAGCGTCGACTCCTTCTGGATGTTGTAATCGGACAAGGT 4593452 Query 225552 TCTCCCATCTTCTAGCTGCTTCCCAGCGAAGATAAGTCGTTGTTGGTCGGGCGGAATACC 225611 | ||||| || |||||||| || ||||| || || || || |||||||| || || || Sbjct 4593453 CCGGCCATCCTCGAGCTGCTTGCCGGCGAAAATCAGGCGCTGCTGGTCGGGAGGGATGCC 4593512 Query 225612 TTCCTTGTCTTGGATCTTTTGCTTCACAGCTTCGATGGTGTCTGAGGTTTCCACGTCTAA 225671 |||||||| |||||||| ||| ||| ||||| ||||| || | || || || | Sbjct 4593513 CTCCTTGTCCTGGATCTTCGACTTGACATTGTCGATCGTGTCCGACGACTCGACCTCAAG 4593572 Query 225672 CGTGATCGTCTTGCCCGT 225689 |||||| ||||||||||| Sbjct 4593573 CGTGATGGTCTTGCCCGT 4593590 Score = 141 bits (156), Expect = 2e-28 Identities = 164/221 (74%), Gaps = 0/221 (0%) Strand=Plus/Plus Query 225493 CGAAGTCTCAGGACAAGGTGGAGAGTGGATTCTTTTTGGACATTGTAATCGGCCAAAGTT 225552 || || | ||| ||||| || |||||| || || |||| ||||| ||| ||| || Sbjct 4592874 CGCAGGCGCAGTACAAGATGTAGAGTGCTCTCCTTCTGGATGTTGTAGTCGCTCAAGGTA 4592933 Query 225553 CTCCCATCTTCTAGCTGCTTCCCAGCGAAGATAAGTCGTTGTTGGTCGGGCGGAATACCT 225612 | || || || |||||||| || ||||| || || || || ||||||||||| || || Sbjct 4592934 CGGCCGTCCTCGAGCTGCTTGCCGGCGAAAATCAGGCGCTGCTGGTCGGGCGGGATGCCC 4592993 Query 225613 TCCTTGTCTTGGATCTTTTGCTTCACAGCTTCGATGGTGTCTGAGGTTTCCACGTCTAAC 225672 |||||||| || ||||| ||| || ||||| ||||| || | |||||| || ||| Sbjct 4592994 TCCTTGTCCTGAATCTTGCTCTTTACGTTGTCGATTGTGTCCGACGATTCCACCTCCAAC 4593053 Query 225673 GTGATCGTCTTGCCCGTCAAAGTTTTTATGAACACTTGCAT 225713 |||||||||||||| ||||| || || | ||| | ||||| Sbjct 4593054 GTGATCGTCTTGCCGGTCAACGTCTTGACGAAGATCTGCAT 4593094 Score = 131 bits (144), Expect = 4e-25 Identities = 164/225 (73%), Gaps = 0/225 (0%) Strand=Plus/Plus Query 225492 ACGAAGTCTCAGGACAAGGTGGAGAGTGGATTCTTTTTGGACATTGTAATCGGCCAAAGT 225551 ||| || | ||| || ||||| || ||| || || |||| ||||| ||| || || Sbjct 625477 ACGGAGGCGCAGCACGAGGTGCAGGGTGCTCTCCTTCTGGATGTTGTAGTCGCTCAGGGT 625536 Query 225552 TCTCCCATCTTCTAGCTGCTTCCCAGCGAAGATAAGTCGTTGTTGGTCGGGCGGAATACC 225611 | ||||| || |||||||| || |||||||| || || ||||||||||| || || || Sbjct 625537 GCGGCCATCCTCGAGCTGCTTGCCGGCGAAGATGAGGCGCTGTTGGTCGGGGGGGATGCC 625596 Query 225612 TTCCTTGTCTTGGATCTTTTGCTTCACAGCTTCGATGGTGTCTGAGGTTTCCACGTCTAA 225671 |||||||| |||||||| ||| || ||||||||||| || | ||||| || | Sbjct 625597 CTCCTTGTCCTGGATCTTGGACTTGACGTTGTCGATGGTGTCGGAAGACTCCACCTCAAG 625656 Query 225672 CGTGATCGTCTTGCCCGTCAAAGTTTTTATGAACACTTGCATTTT 225716 ||||||||||| ||||| | || || | ||| | ||||| || Sbjct 625657 GGTGATCGTCTTCCCCGTGAGGGTCTTGACGAAAATCTGCATCTT 625701 Score = 127 bits (140), Expect = 5e-24 Identities = 141/188 (75%), Gaps = 0/188 (0%) Strand=Plus/Plus Query 225502 AGGACAAGGTGGAGAGTGGATTCTTTTTGGACATTGTAATCGGCCAAAGTTCTCCCATCT 225561 ||||| |||||||| || || || || |||| ||||| ||| || || | || || Sbjct 4593111 AGGACGAGGTGGAGCGTCGACTCCTTCTGGATGTTGTAGTCGCTCAGGGTCCGGCCGTCC 4593170 Query 225562 TCTAGCTGCTTCCCAGCGAAGATAAGTCGTTGTTGGTCGGGCGGAATACCTTCCTTGTCT 225621 || |||||||| || || ||||| || ||||| ||||| ||||| || || |||||||| Sbjct 4593171 TCGAGCTGCTTGCCGGCAAAGATGAGGCGTTGCTGGTCAGGCGGGATGCCCTCCTTGTCC 4593230 Query 225622 TGGATCTTTTGCTTCACAGCTTCGATGGTGTCTGAGGTTTCCACGTCTAACGTGATCGTC 225681 |||||||| ||| ||| ||||| ||||| || | ||||| || | ||||| ||| Sbjct 4593231 TGGATCTTCGACTTGACATTGTCGATTGTGTCCGAAGACTCCACCTCGAGGGTGATGGTC 4593290 Query 225682 TTGCCCGT 225689 |||||||| Sbjct 4593291 TTGCCCGT 4593298 Score = 87.8 bits (96), Expect = 4e-12 Identities = 168/248 (68%), Gaps = 0/248 (0%) Strand=Plus/Minus Query 193500 TTCTGGTTGTTCTTTCGACAGATGGCGTCTTTGTAGACGATGAAGGGCATGCCCACCTCC 193559 ||||||||| |||| || | ||||| ||||| | |||||||| ||||| |||| Sbjct 5389754 TTCTGGTTGCTCTTGCGGTTGCACGCGTCCTTGTACAGCATGAAGGGGTTGCCCGTCTCC 5389695 Query 193560 GCTTGAGCGACGAGAATGTGATGCCAAAGTTCTTGAGCTTTCACTGTCGTTCTGGCCTTT 193619 | || || |||| || | ||| || | || || || ||| | | | | Sbjct 5389694 GTCTGGGCCTCGAGGATCGAGTACCAGAGCTTCTGGGCGCGGACCGTCTTGCGGCCGCGG 5389635 Query 193620 CCTTCCCTCTCGTACTTTTCGTACAGTTCCTCAAAATCTTGTCCGTAGATTTCGTCGAGA 193679 || || | |||||||||||||||||| |||| || || | |||||| ||| |||| Sbjct 5389634 CCCTCGCGCTCGTACTTTTCGTACAGCGCCTCGAACTCGTCGCCGTAGCAGTCGGCGAGG 5389575 Query 193680 CCGGGAGCTTCCTTTGGGCAAAAGAGACTCCAATCTCCATCACTTTCCACCCTCTTCATG 193739 ||||| || || ||||| | ||| |||| || || | | || || | ||||||| Sbjct 5389574 CCGGGGCACTCGTTGGGGCACATGAGCGTCCAGTCGCCGTTCTTCTCGACGCGCTTCATG 5389515 Query 193740 AAGAGGTC 193747 |||||||| Sbjct 5389514 AAGAGGTC 5389507 >seq1 Length=12542233 Score = 120 bits (132), Expect = 7e-22 Identities = 125/164 (76%), Gaps = 0/164 (0%) Strand=Plus/Plus Query 225526 TTTTGGACATTGTAATCGGCCAAAGTTCTCCCATCTTCTAGCTGCTTCCCAGCGAAGATA 225585 || |||| ||||| || | |||||| | |||||||| |||||||| ||||| ||||| Sbjct 3488290 TTCTGGATGTTGTAGTCCGACAAAGTCCGTCCATCTTCGAGCTGCTTACCAGCAAAGATC 3488349 Query 225586 AGTCGTTGTTGGTCGGGCGGAATACCTTCCTTGTCTTGGATCTTTTGCTTCACAGCTTCG 225645 | || ||| || || || ||||| || |||||||| |||||||| ||| ||| ||| Sbjct 3488350 AATCTTTGCTGATCCGGGGGAATGCCCTCCTTGTCCTGGATCTTGGACTTGACATTGTCG 3488409 Query 225646 ATGGTGTCTGAGGTTTCCACGTCTAACGTGATCGTCTTGCCCGT 225689 || ||||| || | || || || | ||| |||||||||||||| Sbjct 3488410 ATAGTGTCAGAAGACTCGACTTCAAGCGTAATCGTCTTGCCCGT 3488453 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1192530772179432