Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Drechmeria_20coniospora_20[genbank_20GCA_5F001625195.1_202016-04-24] 28 sequences; 32,831,003 total letters Query= NC_030394.2 Length=126965 Score E Sequences producing significant alignments: (Bits) Value seq2 93.3 3e-14 seq1 82.4 6e-11 >seq2 Length=10204147 Score = 93.3 bits (102), Expect = 3e-14 Identities = 132/181 (73%), Gaps = 6/181 (3%) Strand=Plus/Minus Query 53494 CGTCAAGGTGAGGCTGAGGACCCCCAGGCACCCAGAGATGGGCGACAAGTTTGCATC-CT 53552 |||||||||| | | |||| ||| | ||| |||| |||||||||||||| || | Sbjct 7430688 CGTCAAGGTGCGCGTTCGGACGACCAAGATCCCGCAGATCGGCGACAAGTTTGCCTCGCG 7430629 Query 53553 TCACGGCGCAAAAGGGGACATGCGGAGCG--GTCCTGACTCAGGAGGACATGCCCTTCGA 53610 |||||| ||| ||||| || ||| | | || | | | ||||||||||||||||| Sbjct 7430628 TCACGG-GCAGAAGGGCACTATCGGCGTGACGTACCGGC--AGGAGGACATGCCCTTCAC 7430572 Query 53611 CAAGGACGGGGTGGTGCCCGACCTCATCATCAACCCCCACGCCTTTCCCTCCAGGATGAC 53670 ||| || || ||||||| ||||||||||||| ||||| |||| || | ||||| Sbjct 7430571 GCGGGAGGGCGTCACGCCCGACATCATCATCAACCCTCACGCGATTCCGTCGCGAATGAC 7430512 Query 53671 G 53671 | Sbjct 7430511 G 7430511 >seq1 Length=12542233 Score = 82.4 bits (90), Expect = 6e-11 Identities = 117/162 (72%), Gaps = 2/162 (1%) Strand=Plus/Minus Query 29654 TCCACGTGGTCAAGGTAGACGTGAGCATCTCCCAGGGTGTG-GACAAACTCTCCCGGTTC 29712 ||||| || || || ||||| || || || |||| | ||| | | ||| || || | Sbjct 9529550 TCCACATGATCCAGATAGACATGCGCGTCACCCATGACGTGCGTGAGGCTC-CCGGGGAC 9529492 Query 29713 TAGCCCGGTGACGTGAGCCATCATGTACGTGAGGAGAGAGTAGCTGGCGATGTTAAAGGG 29772 || || ||| |||| | ||||| |||||||| ||||| ||||||||||| ||||| Sbjct 9529491 GAGGTCGCAGACACGAGCAAGCATGTGGGTGAGGAGTGAGTAACTGGCGATGTTGAAGGG 9529432 Query 29773 CACCCCGAGCCCCATGTCCCCTGACCTCTGGTAGAGCTGGCA 29814 || ||||| |||||||| | || | || || |||||||| Sbjct 9529431 AACTCCGAGGCCCATGTCGCAAGATCGTTGATACAGCTGGCA 9529390 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 406163061396808