Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Drechmeria_20coniospora_20[genbank_20GCA_5F001625195.1_202016-04-24]
28 sequences; 32,831,003 total letters
Query= NC_031033.1
Length=217124
Score E
Sequences producing significant alignments: (Bits) Value
seq3 105 9e-18
>seq3
Length=9751215
Score = 105 bits (116), Expect = 9e-18
Identities = 149/209 (71%), Gaps = 3/209 (1%)
Strand=Plus/Plus
Query 48141 CATGCAAAATCACAATGAAGACCTTCATCTCTACTAATTAATTCGTTAGAAAATGTGAGA 48200
|| |||||||| |||||||| ||||| | || | ||||| || ||||| |||
Sbjct 2598887 CACGCAAAATCGGTGTGAAGACCCTCATCACGCGAGATGAGCTCGTTGGAGAATGTCAGA 2598946
Query 48201 CCGGGCATTAGTCCACGTTTTTTGAGCCAAAATATTGCCGCGAAAGATCCAGAAAAGAAT 48260
|| ||||| || || || || || ||||| || |||| ||||||| || |||||
Sbjct 2598947 CCAGGCATGAGACCGCGCTTCTTCAGCCAGAAGATTGAGGCGAAAGCACCGCTGAAGAAG 2599006
Query 48261 ATGCCTTCTACGGCCGCAAATGCGGTAAGTCTCTCTCCGTAACTGGCTTCGTTGTGT--- 48317
|||||||| ||||| ||||| || |||||| | || | ||| || |||| |
Sbjct 2599007 ATGCCTTCGACGGCGGCAAAGGCAACAAGTCTTTGGGCGAACGTGGACTCCTTGTCTTGG 2599066
Query 48318 ATCCACCGTTGTGCCCAATCAGCCTTCTT 48346
||||| || | |||||||||||||||||
Sbjct 2599067 ATCCAACGCAGGGCCCAATCAGCCTTCTT 2599095
Score = 102 bits (112), Expect = 1e-16
Identities = 270/410 (66%), Gaps = 2/410 (0%)
Strand=Plus/Minus
Query 77955 CCAGGGCATTCATTTGGGCACATCAATGACCAGTCACCATCTTCCTTAACTCGTTTCATA 78014
|| ||||| || || |||||||| | | |||||| || | | || || || |||||
Sbjct 5389574 CCGGGGCACTCGTTGGGGCACATGAGCGTCCAGTCGCCGTTCTTCTCGACGCGCTTCATG 5389515
Query 78015 AAGAGATCAGGTATCCATAGAGCAATAAATAGATCTCGGGTTCTATGTTCTTCATTTCCT 78074
||||| || || ||||| || || | || || || || | | || || || ||
Sbjct 5389514 AAGAGGTCGGGGATCCAGAGCGCGAGGAACAGGTCGCGCGCGCGCACCTCCTCCTTGCCG 5389455
Query 78075 GTATTCTTTTTAAGATCGAGAAACTCCATAATATCAGAATGCCATGGTTCTAGATATATT 78134
||||| || ||||||||||| | || || | ||||| ||||| || || ||
Sbjct 5389454 TGGTTCTTGCGCAGGTCGAGAAACTCAAAAACGTCGGCGTGCCACGGTTCCAGGTAGATG 5389395
Query 78135 GCCATAACTCCAGGTCGTTTATTACCTCCCTGATCTATATATCTGGCGGTGTTATTATAA 78194
|| | | || || || || || || ||||| || | || | ||| ||||| || |
Sbjct 5389394 GCGAAGGCGCCCGGCCGCTTGTTGCCGCCCTGGTCGACGTACCGGGCCGTGTTGTTGAAG 5389335
Query 78195 ACTCTCAACATTGGAATAATACCGTTAGATGTTCCATTTGTTCCAGAAATATAACTTCCA 78254
|| | | ||| || | || ||||| || || || || || || | ||| || |||
Sbjct 5389334 ACGCGAAGCATGGGCGTGATGCCGTTGGAGGTACCGTTGGTGCCGGCAATGTAGGATCCG 5389275
Query 78255 CTTGCGCGAATATTACTAATGGATATCCCTATTCCTCCTGCCATCTTAGATATTAGAGCG 78314
| ||||| || ||| | || || || || |||||||| || || | |||
Sbjct 5389274 GTGGCGCGGATGCGGTGGATGTTGAGGCCGATGCCGCCGGCCATCTTGGAGATCATGGCG 5389215
Query 78315 CAACGT-TTCAATGTATCGTAGATACCCTCTATACTGTCATCCATCATGT 78363
| |||| || | || |||||||| ||||| || ||||| ||| ||||||
Sbjct 5389214 C-ACGTCTTGAGCGTGTCGTAGATGCCCTCGATGCTGTCGTCCTTCATGT 5389166
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 694668556865920
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |