Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Drechmeria_20coniospora_20[genbank_20GCA_5F001625195.1_202016-04-24] 28 sequences; 32,831,003 total letters Query= NC_031465.1 Length=360610 Score E Sequences producing significant alignments: (Bits) Value seq3 102 2e-16 seq1 98.7 2e-15 >seq3 Length=9751215 Score = 102 bits (112), Expect = 2e-16 Identities = 137/191 (72%), Gaps = 0/191 (0%) Strand=Plus/Plus Query 151892 GAGGACAAGATGAAGAGTAGACTCTTTTTGGATGTTGTAATCGGCTAAAGTTCTCCCATC 151951 |||||| || || || || ||||| || |||||||||||||||| || || | ||||| Sbjct 4593402 GAGGACGAGGTGGAGCGTCGACTCCTTCTGGATGTTGTAATCGGACAAGGTCCGGCCATC 4593461 Query 151952 TTCTAGGCTTTTCCCGGCGAAGATAAGCCTCTGCTGGTCCGCCGAGATTCCTTCCTTTTC 152011 || || || |||||||| || || | ||||||||| | | ||| || ||||| || Sbjct 4593462 CTCGAGCTGCTTGCCGGCGAAAATCAGGCGCTGCTGGTCGGGAGGGATGCCCTCCTTGTC 4593521 Query 152012 TTGAATTTTTTGTTTGACAGTCTCTACGCTGTCTGAACTCTCTACTTCAAGAGTAATAGT 152071 || || || |||||| | || | |||| || ||| || ||||| || || || Sbjct 4593522 CTGGATCTTCGACTTGACATTGTCGATCGTGTCCGACGACTCGACCTCAAGCGTGATGGT 4593581 Query 152072 TTTGCCCGTGA 152082 |||||||||| Sbjct 4593582 CTTGCCCGTGA 4593592 Score = 98.7 bits (108), Expect = 2e-15 Identities = 147/209 (70%), Gaps = 0/209 (0%) Strand=Plus/Plus Query 151886 GAGTCTGAGGACAAGATGAAGAGTAGACTCTTTTTGGATGTTGTAATCGGCTAAAGTTCT 151945 ||| | |||||| || || || || ||||| || ||||||||||| ||| | || | Sbjct 4593104 GAGACGGAGGACGAGGTGGAGCGTCGACTCCTTCTGGATGTTGTAGTCGCTCAGGGTCCG 4593163 Query 151946 CCCATCTTCTAGGCTTTTCCCGGCGAAGATAAGCCTCTGCTGGTCCGCCGAGATTCCTTC 152005 || || || || || ||||| ||||| || | |||||||| | || ||| || || Sbjct 4593164 GCCGTCCTCGAGCTGCTTGCCGGCAAAGATGAGGCGTTGCTGGTCAGGCGGGATGCCCTC 4593223 Query 152006 CTTTTCTTGAATTTTTTGTTTGACAGTCTCTACGCTGTCTGAACTCTCTACTTCAAGAGT 152065 ||| || || || || |||||| | || | |||| ||| ||| || || || || Sbjct 4593224 CTTGTCCTGGATCTTCGACTTGACATTGTCGATTGTGTCCGAAGACTCCACCTCGAGGGT 4593283 Query 152066 AATAGTTTTGCCCGTGAGAGTCTTCACGA 152094 || || ||||||||||| ||||| |||| Sbjct 4593284 GATGGTCTTGCCCGTGAGTGTCTTGACGA 4593312 Score = 96.9 bits (106), Expect = 8e-15 Identities = 140/198 (71%), Gaps = 0/198 (0%) Strand=Plus/Plus Query 151913 CTCTTTTTGGATGTTGTAATCGGCTAAAGTTCTCCCATCTTCTAGGCTTTTCCCGGCGAA 151972 ||| || ||||||||||| ||| | || | ||||| || || || |||||||| Sbjct 625507 CTCCTTCTGGATGTTGTAGTCGCTCAGGGTGCGGCCATCCTCGAGCTGCTTGCCGGCGAA 625566 Query 151973 GATAAGCCTCTGCTGGTCCGCCGAGATTCCTTCCTTTTCTTGAATTTTTTGTTTGACAGT 152032 ||| || | ||| ||||| | | ||| || ||||| || || || || ||||| | Sbjct 625567 GATGAGGCGCTGTTGGTCGGGGGGGATGCCCTCCTTGTCCTGGATCTTGGACTTGACGTT 625626 Query 152033 CTCTACGCTGTCTGAACTCTCTACTTCAAGAGTAATAGTTTTGCCCGTGAGAGTCTTCAC 152092 || | | |||| ||| ||| || ||||| || || || || |||||||| ||||| || Sbjct 625627 GTCGATGGTGTCGGAAGACTCCACCTCAAGGGTGATCGTCTTCCCCGTGAGGGTCTTGAC 625686 Query 152093 GAAGACCTGCATTTTACC 152110 ||| | |||||| || || Sbjct 625687 GAAAATCTGCATCTTGCC 625704 Score = 86.0 bits (94), Expect = 1e-11 Identities = 146/212 (69%), Gaps = 0/212 (0%) Strand=Plus/Plus Query 151893 AGGACAAGATGAAGAGTAGACTCTTTTTGGATGTTGTAATCGGCTAAAGTTCTCCCATCT 151952 || |||||||| ||||| ||| || ||||||||||| ||| || || | || || Sbjct 4592883 AGTACAAGATGTAGAGTGCTCTCCTTCTGGATGTTGTAGTCGCTCAAGGTACGGCCGTCC 4592942 Query 151953 TCTAGGCTTTTCCCGGCGAAGATAAGCCTCTGCTGGTCCGCCGAGATTCCTTCCTTTTCT 152012 || || || |||||||| || || | ||||||||| | || ||| || ||||| || Sbjct 4592943 TCGAGCTGCTTGCCGGCGAAAATCAGGCGCTGCTGGTCGGGCGGGATGCCCTCCTTGTCC 4593002 Query 152013 TGAATTTTTTGTTTGACAGTCTCTACGCTGTCTGAACTCTCTACTTCAAGAGTAATAGTT 152072 ||||| || || || | || | |||| || || || || | || || || Sbjct 4593003 TGAATCTTGCTCTTTACGTTGTCGATTGTGTCCGACGATTCCACCTCCAACGTGATCGTC 4593062 Query 152073 TTGCCCGTGAGAGTCTTCACGAAGACCTGCAT 152104 ||||| || | ||||| ||||||| |||||| Sbjct 4593063 TTGCCGGTCAACGTCTTGACGAAGATCTGCAT 4593094 >seq1 Length=12542233 Score = 98.7 bits (108), Expect = 2e-15 Identities = 129/179 (72%), Gaps = 0/179 (0%) Strand=Plus/Plus Query 151917 TTTTGGATGTTGTAATCGGCTAAAGTTCTCCCATCTTCTAGGCTTTTCCCGGCGAAGATA 151976 || ||||||||||| || | ||||| | |||||||| || || || || ||||| Sbjct 3488290 TTCTGGATGTTGTAGTCCGACAAAGTCCGTCCATCTTCGAGCTGCTTACCAGCAAAGATC 3488349 Query 151977 AGCCTCTGCTGGTCCGCCGAGATTCCTTCCTTTTCTTGAATTTTTTGTTTGACAGTCTCT 152036 | || ||||| |||| | || || ||||| || || || || |||||| | || Sbjct 3488350 AATCTTTGCTGATCCGGGGGAATGCCCTCCTTGTCCTGGATCTTGGACTTGACATTGTCG 3488409 Query 152037 ACGCTGTCTGAACTCTCTACTTCAAGAGTAATAGTTTTGCCCGTGAGAGTCTTCACGAA 152095 | |||| ||| ||| |||||||| ||||| || |||||||| || ||||||||||| Sbjct 3488410 ATAGTGTCAGAAGACTCGACTTCAAGCGTAATCGTCTTGCCCGTTAGGGTCTTCACGAA 3488468 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1153820386066788