Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Drechmeria_20coniospora_20[genbank_20GCA_5F001625195.1_202016-04-24]
28 sequences; 32,831,003 total letters
Query= NC_032001.1
Length=327147
Score E
Sequences producing significant alignments: (Bits) Value
seq3 178 3e-39
seq1 134 3e-26
>seq3
Length=9751215
Score = 178 bits (196), Expect = 3e-39
Identities = 178/231 (77%), Gaps = 0/231 (0%)
Strand=Plus/Plus
Query 282872 ACCACCACGCAGGCGAAGTACCAGATGTAACGTGCTTTCTTTTTGGATGTTGTAGTCAGC 282931
||||||||| ||||| || || || || | ||||| || || ||||||||||||||
Sbjct 625471 ACCACCACGGAGGCGCAGCACGAGGTGCAGGGTGCTCTCCTTCTGGATGTTGTAGTCGCT 625530
Query 282932 AAGCGTGCGGCCATCCTCTAGTTGTTTCCCGGCAAAGATCAAACGTTGTTGGTCACCCGG 282991
|| |||||||||||||| || || || ||||| ||||| | || |||||||| ||
Sbjct 625531 CAGGGTGCGGCCATCCTCGAGCTGCTTGCCGGCGAAGATGAGGCGCTGTTGGTCGGGGGG 625590
Query 282992 AATACCCTCCTTGTCTTGGATCTTTGCTTTTACGGTATCGATAGTGTCCGAAGCTTCGAC 283051
|| ||||||||||| |||||||| | || ||| | ||||| ||||| |||| || ||
Sbjct 625591 GATGCCCTCCTTGTCCTGGATCTTGGACTTGACGTTGTCGATGGTGTCGGAAGACTCCAC 625650
Query 283052 TTCGAGAGTGATCGTCTTACCCGTCAAAGTCTTAACGAATATCTGCATTTT 283102
|| || ||||||||||| ||||| | ||||| ||||| |||||||| ||
Sbjct 625651 CTCAAGGGTGATCGTCTTCCCCGTGAGGGTCTTGACGAAAATCTGCATCTT 625701
Score = 178 bits (196), Expect = 3e-39
Identities = 180/229 (79%), Gaps = 4/229 (2%)
Strand=Plus/Plus
Query 282873 CCACCACGCAGGCGAAGTACCAGATGTAACGTGCTTTCTTTTTGGATGTTGTAGTC-AGC 282931
|| || |||||||| ||||| ||||||| ||||| || || |||||||||||||| |
Sbjct 4592868 CCGCCGCGCAGGCGCAGTACAAGATGTAGAGTGCTCTCCTTCTGGATGTTGTAGTCGCTC 4592927
Query 282932 AAGCGTGCGGCCATCCTCTAGTTGTTTCCCGGCAAAGATCAAACGTTGTTGGTCACCCGG 282991
||| || ||||| ||||| || || || ||||| || |||| || || ||||| |||
Sbjct 4592928 AAG-GTACGGCCGTCCTCGAGCTGCTTGCCGGCGAAAATCAGGCGCTGCTGGTCGGGCGG 4592986
Query 282992 AATACCCTCCTTGTCTTGGATCTTTGCT-TTTACGGTATCGATAGTGTCCGAAGCTTCGA 283050
|| ||||||||||| || ||| ||||| |||||| | ||||| |||||||| | ||| |
Sbjct 4592987 GATGCCCTCCTTGTCCTGAATC-TTGCTCTTTACGTTGTCGATTGTGTCCGACGATTCCA 4593045
Query 283051 CTTCGAGAGTGATCGTCTTACCCGTCAAAGTCTTAACGAATATCTGCAT 283099
| || | ||||||||||| || ||||| ||||| ||||| ||||||||
Sbjct 4593046 CCTCCAACGTGATCGTCTTGCCGGTCAACGTCTTGACGAAGATCTGCAT 4593094
Score = 149 bits (164), Expect = 1e-30
Identities = 165/220 (75%), Gaps = 0/220 (0%)
Strand=Plus/Plus
Query 282873 CCACCACGCAGGCGAAGTACCAGATGTAACGTGCTTTCTTTTTGGATGTTGTAGTCAGCA 282932
||||| || || || || || || || | ||| || || ||||||||||||||
Sbjct 4593096 CCACCGCGGAGACGGAGGACGAGGTGGAGCGTCGACTCCTTCTGGATGTTGTAGTCGCTC 4593155
Query 282933 AGCGTGCGGCCATCCTCTAGTTGTTTCCCGGCAAAGATCAAACGTTGTTGGTCACCCGGA 282992
|| || ||||| ||||| || || || ||||||||||| | ||||| |||||| |||
Sbjct 4593156 AGGGTCCGGCCGTCCTCGAGCTGCTTGCCGGCAAAGATGAGGCGTTGCTGGTCAGGCGGG 4593215
Query 282993 ATACCCTCCTTGTCTTGGATCTTTGCTTTTACGGTATCGATAGTGTCCGAAGCTTCGACT 283052
|| ||||||||||| |||||||| | || || | ||||| |||||||||| || ||
Sbjct 4593216 ATGCCCTCCTTGTCCTGGATCTTCGACTTGACATTGTCGATTGTGTCCGAAGACTCCACC 4593275
Query 283053 TCGAGAGTGATCGTCTTACCCGTCAAAGTCTTAACGAATA 283092
||||| ||||| ||||| ||||| | ||||| |||| ||
Sbjct 4593276 TCGAGGGTGATGGTCTTGCCCGTGAGTGTCTTGACGACTA 4593315
Score = 127 bits (140), Expect = 4e-24
Identities = 152/204 (75%), Gaps = 2/204 (1%)
Strand=Plus/Plus
Query 282873 CCACCACGCAGGCGAAGTACCAGATGTAACGTGCTTTCTTTTTGGATGTTGTAGTCAG-C 282931
|| ||||| ||||| || || || || | ||| || || ||||||||||| || | |
Sbjct 4593388 CCGCCACGAAGGCGGAGGACGAGGTGGAGCGTCGACTCCTTCTGGATGTTGTAATCGGAC 4593447
Query 282932 AAGCGTGCGGCCATCCTCTAGTTGTTTCCCGGCAAAGATCAAACGTTGTTGGTCACCCGG 282991
||| || ||||||||||| || || || ||||| || |||| || || ||||| ||
Sbjct 4593448 AAG-GTCCGGCCATCCTCGAGCTGCTTGCCGGCGAAAATCAGGCGCTGCTGGTCGGGAGG 4593506
Query 282992 AATACCCTCCTTGTCTTGGATCTTTGCTTTTACGGTATCGATAGTGTCCGAAGCTTCGAC 283051
|| ||||||||||| |||||||| | || || | ||||| |||||||| | |||||
Sbjct 4593507 GATGCCCTCCTTGTCCTGGATCTTCGACTTGACATTGTCGATCGTGTCCGACGACTCGAC 4593566
Query 283052 TTCGAGAGTGATCGTCTTACCCGT 283075
|| || ||||| ||||| |||||
Sbjct 4593567 CTCAAGCGTGATGGTCTTGCCCGT 4593590
Score = 105 bits (116), Expect = 1e-17
Identities = 172/248 (69%), Gaps = 0/248 (0%)
Strand=Plus/Minus
Query 230163 ATCGTCACAGAAGTAGTTGCAAATGAAAAGGAGTTCATTTGCGACGCTATTCCTTGCCGT 230222
||| |||| || | || | | ||| |||||||| | ||| || | || || |
Sbjct 2598834 ATCATCACCGACGCCGTCACCATTGAGCAGGAGTTCCTCACCGAGGCCCTCCCATGTGCT 2598775
Query 230223 CTTATCGGCATGAATGCTGATCTCATGGGGCAATATATCGAATTCGTAGCTGATCGTATT 230282
|| ||||||||||||| | ||| ||| || ||||| ||||| || |||||| |
Sbjct 2598774 CTGCTCGGCATGAATGCCACCTTGATGAAGCAGTACATCGAGTTCGTTGCCGATCGTCTC 2598715
Query 230283 TTCGTGGCGCTAGGGTACGAGAAAGTGTATAACTCCAAGAACCCCTTCGCTTTTATGGAG 230342
| || || || || ||||||| ||||| || || ||||||||||| || ||||||
Sbjct 2598714 CTTGTTGCTCTCGGCAACGAGAAGGTGTACAAATCGTCGAACCCCTTCGACTTCATGGAG 2598655
Query 230343 CTCATTTCACTCCAGGGGAAAACTAACTTCTTCGAAAAGCGTGTCAGCGATTATCAAAGG 230402
||| || ||| || || || || |||||||| || ||||| ||| ||||||| |
Sbjct 2598654 AACATCTCCCTCGGTGGCAAGACCAATTTCTTCGAGAAACGTGTTGCCGACTATCAAAAG 2598595
Query 230403 CCCGGTGT 230410
|||| ||
Sbjct 2598594 GCCGGCGT 2598587
>seq1
Length=12542233
Score = 134 bits (148), Expect = 3e-26
Identities = 137/179 (77%), Gaps = 0/179 (0%)
Strand=Plus/Plus
Query 282912 TTTTGGATGTTGTAGTCAGCAAGCGTGCGGCCATCCTCTAGTTGTTTCCCGGCAAAGATC 282971
|| |||||||||||||| | | || || ||||| || || || || || |||||||||
Sbjct 3488290 TTCTGGATGTTGTAGTCCGACAAAGTCCGTCCATCTTCGAGCTGCTTACCAGCAAAGATC 3488349
Query 282972 AAACGTTGTTGGTCACCCGGAATACCCTCCTTGTCTTGGATCTTTGCTTTTACGGTATCG 283031
|| | ||| || || ||||| ||||||||||| |||||||| | || || | |||
Sbjct 3488350 AATCTTTGCTGATCCGGGGGAATGCCCTCCTTGTCCTGGATCTTGGACTTGACATTGTCG 3488409
Query 283032 ATAGTGTCCGAAGCTTCGACTTCGAGAGTGATCGTCTTACCCGTCAAAGTCTTAACGAA 283090
|||||||| |||| |||||||| || || |||||||| ||||| | ||||| |||||
Sbjct 3488410 ATAGTGTCAGAAGACTCGACTTCAAGCGTAATCGTCTTGCCCGTTAGGGTCTTCACGAA 3488468
Score = 84.2 bits (92), Expect = 5e-11
Identities = 121/168 (72%), Gaps = 2/168 (1%)
Strand=Plus/Plus
Query 315667 ACCCCACCTCCGAAATTCTTAAGCGCCTCTGCCATGGCACCGAGACTCTCGCGGTCCACA 315726
|| ||||| |||| ||||| | |||| | || ||||||||| ||||||||||
Sbjct 11686611 ACACCACCCTCGAACTTCTTCAAGGCCTTGGACAGGGCACCGAGGGAGTCGCGGTCCAGG 11686670
Query 315727 AAGTTGGTCGGCTCATCAAGAACGATGACGTGGGGTTGTTGCCATAGAGC-GGCGCCGAT 315785
||||||||||||| ||||| ||||| | || || | ||||| |||| ||| |||
Sbjct 11686671 TAGTTGGTCGGCTCGTCAAGGACGATAAGATGCGGGCGCTGCCA-CGAGCAGGCAGCGAG 11686729
Query 315786 AACGAGCTTTAGTTTTTGCCCACCAGACAGTCCACGGATGCGAGAATG 315833
||| ||| | || ||||||||||| ||||| ||||| || ||
Sbjct 11686730 GACGGTCTTGACACGCTGGCCACCAGACAGACCACGCATGCGGGAGTG 11686777
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 1046738824482312
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |