Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Drechmeria_20coniospora_20[genbank_20GCA_5F001625195.1_202016-04-24]
28 sequences; 32,831,003 total letters
Query= NC_032255.1
Length=112536
Score E
Sequences producing significant alignments: (Bits) Value
seq3 132 3e-26
seq1 95.1 9e-15
>seq3
Length=9751215
Score = 132 bits (146), Expect = 3e-26
Identities = 157/213 (74%), Gaps = 0/213 (0%)
Strand=Plus/Plus
Query 44125 CAACACCAGGTGAAGCGTGCTCTCCTTTTGGATGTTGTAATCGGCGAGTTGGCGCTCGTC 44184
|| ||| ||||| || ||||||||||| ||||||||||| ||| || ||| | ||
Sbjct 625486 CAGCACGAGGTGCAGGGTGCTCTCCTTCTGGATGTTGTAGTCGCTCAGGGTGCGGCCATC 625545
Query 44185 GTCCAGCTGCTTCCCGGCAAAGATCAAACGCTGCTGATCTGAAGGCACACCTTCCTTTTC 44244
|| |||||||| ||||| ||||| | ||||| || || | || | || ||||| ||
Sbjct 625546 CTCGAGCTGCTTGCCGGCGAAGATGAGGCGCTGTTGGTCGGGGGGGATGCCCTCCTTGTC 625605
Query 44245 CGTTATCTTCTGCTTCAATGTTCCTATGGTGTCGGCGGATTCCACCTCCACCGTAATCGT 44304
| ||||| ||| | | | |||||||||| || |||||||| | || |||||
Sbjct 625606 CTGGATCTTGGACTTGACGTTGTCGATGGTGTCGGAAGACTCCACCTCAAGGGTGATCGT 625665
Query 44305 CTTTCCCGTGAGGGTCTTCACGAAGATTTGCAT 44337
||| |||||||||||||| ||||| || |||||
Sbjct 625666 CTTCCCCGTGAGGGTCTTGACGAAAATCTGCAT 625698
Score = 122 bits (134), Expect = 6e-23
Identities = 166/229 (72%), Gaps = 2/229 (1%)
Strand=Plus/Plus
Query 44111 CCCCCTCTCAGTCTCAACACCAGGTGAAGCGTGCTCTCCTTTTGGATGTTGTAATCGG-C 44169
|| || | ||| | || || || || || ||||||||||| ||||||||||| ||| |
Sbjct 4592868 CCGCCGCGCAGGCGCAGTACAAGATGTAGAGTGCTCTCCTTCTGGATGTTGTAGTCGCTC 4592927
Query 44170 GAGTTGGCGCTCGTCGTCCAGCTGCTTCCCGGCAAAGATCAAACGCTGCTGATCTGAAGG 44229
|| | || |||| || |||||||| ||||| || |||| |||||||| || | ||
Sbjct 4592928 AAGGTACGGC-CGTCCTCGAGCTGCTTGCCGGCGAAAATCAGGCGCTGCTGGTCGGGCGG 4592986
Query 44230 CACACCTTCCTTTTCCGTTATCTTCTGCTTCAATGTTCCTATGGTGTCGGCGGATTCCAC 44289
| || ||||| ||| ||||| ||| | | | || ||||| | ||||||||
Sbjct 4592987 GATGCCCTCCTTGTCCTGAATCTTGCTCTTTACGTTGTCGATTGTGTCCGACGATTCCAC 4593046
Query 44290 CTCCACCGTAATCGTCTTTCCCGTGAGGGTCTTCACGAAGATTTGCATG 44338
||||| ||| |||||||| || || | ||||| |||||||| ||||||
Sbjct 4593047 CTCCAACGTGATCGTCTTGCCGGTCAACGTCTTGACGAAGATCTGCATG 4593095
Score = 105 bits (116), Expect = 5e-18
Identities = 145/201 (72%), Gaps = 4/201 (2%)
Strand=Plus/Plus
Query 44129 ACCAGGTGAAGCGTGCTCTCCTTTTGGATGTTGTAATCGGCGAGTTGGCGCTCGTCGTCC 44188
|| ||||| ||||| |||||| ||||||||||| ||| || || |||| ||
Sbjct 4593114 ACGAGGTGGAGCGTCGACTCCTTCTGGATGTTGTAGTCGCTCAGGGTCCGGCCGTCCTCG 4593173
Query 44189 AGCTGCTTCCCGGCAAAGATCAAACGCTGCTGATCTGAAGGCACACCTTCCTTTTCCGTT 44248
|||||||| ||||||||||| | || ||||| || | || | || ||||| |||
Sbjct 4593174 AGCTGCTTGCCGGCAAAGATGAGGCGTTGCTGGTCAGGCGGGATGCCCTCCTTGTCCTGG 4593233
Query 44249 ATCTTCTGCTT--CAATGTTCCTATGGTGTCGGCGGATTCCACCTCCACCGTAATCGTCT 44306
|||||| ||| || ||| | || ||||| | || |||||||| | || || ||||
Sbjct 4593234 ATCTTCGACTTGACATTGT--CGATTGTGTCCGAAGACTCCACCTCGAGGGTGATGGTCT 4593291
Query 44307 TTCCCGTGAGGGTCTTCACGA 44327
| |||||||| ||||| ||||
Sbjct 4593292 TGCCCGTGAGTGTCTTGACGA 4593312
Score = 100 bits (110), Expect = 2e-16
Identities = 139/190 (73%), Gaps = 6/190 (3%)
Strand=Plus/Plus
Query 44129 ACCAGGTGAAGCGTGCTCTCCTTTTGGATGTTGTAATCGG-CGAGTTGGCGCTCGTCGTC 44187
|| ||||| ||||| |||||| |||||||||||||||| | || | || | || ||
Sbjct 4593406 ACGAGGTGGAGCGTCGACTCCTTCTGGATGTTGTAATCGGACAAGGT-CCGGCCATCCTC 4593464
Query 44188 CAGCTGCTTCCCGGCAAAGATCAAACGCTGCTGATCTGAAGGCACACCTTCCTTTTCCGT 44247
|||||||| ||||| || |||| |||||||| || | ||| | || ||||| |||
Sbjct 4593465 GAGCTGCTTGCCGGCGAAAATCAGGCGCTGCTGGTCGGGAGGGATGCCCTCCTTGTCCTG 4593524
Query 44248 TATCTTCTGCTT--CAATGTTCCTATGGTGTCGGCGGATTCCACCTCCACCGTAATCGTC 44305
|||||| ||| || ||| | || ||||| | || || ||||| | ||| || |||
Sbjct 4593525 GATCTTCGACTTGACATTGT--CGATCGTGTCCGACGACTCGACCTCAAGCGTGATGGTC 4593582
Query 44306 TTTCCCGTGA 44315
|| |||||||
Sbjct 4593583 TTGCCCGTGA 4593592
>seq1
Length=12542233
Score = 95.1 bits (104), Expect = 9e-15
Identities = 132/183 (72%), Gaps = 4/183 (2%)
Strand=Plus/Plus
Query 44148 CCTTTTGGATGTTGTAATCGGCGAGTTGGCGCTCGTCGTCCAGCTGCTTCCCGGCAAAGA 44207
|||| ||||||||||| || | | || | || || |||||||| || |||||||
Sbjct 3488288 CCTTCTGGATGTTGTAGTCCGACAAAGTCCGTCCATCTTCGAGCTGCTTACCAGCAAAGA 3488347
Query 44208 TCAAACGCTGCTGATCTGAAGGCACACCTTCCTTTTCCGTTATCTTCTGCTT--CAATGT 44265
|||| | |||||||| | || | || ||||| ||| ||||| ||| || |||
Sbjct 3488348 TCAATCTTTGCTGATCCGGGGGAATGCCCTCCTTGTCCTGGATCTTGGACTTGACATTGT 3488407
Query 44266 TCCTATGGTGTCGGCGGATTCCACCTCCACCGTAATCGTCTTTCCCGTGAGGGTCTTCAC 44325
| || ||||| | || || || || | |||||||||||| ||||| |||||||||||
Sbjct 3488408 --CGATAGTGTCAGAAGACTCGACTTCAAGCGTAATCGTCTTGCCCGTTAGGGTCTTCAC 3488465
Query 44326 GAA 44328
|||
Sbjct 3488466 GAA 3488468
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 359990277153276
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |