Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Drechmeria_20coniospora_20[genbank_20GCA_5F001625195.1_202016-04-24]
28 sequences; 32,831,003 total letters
Query= NC_033775.1
Length=376207
Score E
Sequences producing significant alignments: (Bits) Value
seq3 147 5e-30
seq1 118 3e-21
>seq3
Length=9751215
Score = 147 bits (162), Expect = 5e-30
Identities = 156/206 (76%), Gaps = 0/206 (0%)
Strand=Plus/Minus
Query 177924 CAAATTTTCGTGAAAACTCTCACAGGAAAAACGATCACCCTCGAGGTGGAAAGCTCAGAC 177983
|| |||||||| || || ||||| || || ||||||||||| |||||||| || |||
Sbjct 625695 CAGATTTTCGTCAAGACCCTCACGGGGAAGACGATCACCCTTGAGGTGGAGTCTTCCGAC 625636
Query 177984 ACCATCGAGAACGTCAAACAAAAGATTCAGGACAAAGAAGGAATCCCTCCGGACCAGCAA 178043
|||||||| |||||||| ||||| |||||||| || || ||||| || ||||| ||
Sbjct 625635 ACCATCGACAACGTCAAGTCCAAGATCCAGGACAAGGAGGGCATCCCCCCCGACCAACAG 625576
Query 178044 CGACTTATCTTCGCCGGAAAACAGCTCGAAGATGGAAGGACTCTTGCCGATTATAACGTC 178103
|| || ||||||||||| || |||||||| ||||| | || || ||| || ||| ||
Sbjct 625575 CGCCTCATCTTCGCCGGCAAGCAGCTCGAGGATGGCCGCACCCTGAGCGACTACAACATC 625516
Query 178104 CAAAAAGAATCAACACTGCATCTTGT 178129
|| || || || ||||| || ||
Sbjct 625515 CAGAAGGAGAGCACCCTGCACCTCGT 625490
Score = 138 bits (152), Expect = 3e-27
Identities = 150/199 (75%), Gaps = 0/199 (0%)
Strand=Plus/Minus
Query 177931 TCGTGAAAACTCTCACAGGAAAAACGATCACCCTCGAGGTGGAAAGCTCAGACACCATCG 177990
|||| || || ||||| || || || ||||||||||||||||| || ||||| ||||
Sbjct 4593312 TCGTCAAGACACTCACGGGCAAGACCATCACCCTCGAGGTGGAGTCTTCGGACACAATCG 4593253
Query 177991 AGAACGTCAAACAAAAGATTCAGGACAAAGAAGGAATCCCTCCGGACCAGCAACGACTTA 178050
| || ||||| ||||| |||||||| || || ||||| || ||||||||||| || |
Sbjct 4593252 ACAATGTCAAGTCGAAGATCCAGGACAAGGAGGGCATCCCGCCTGACCAGCAACGCCTCA 4593193
Query 178051 TCTTCGCCGGAAAACAGCTCGAAGATGGAAGGACTCTTGCCGATTATAACGTCCAAAAAG 178110
|||| ||||| || |||||||| || || |||| || ||| || ||| |||| || |
Sbjct 4593192 TCTTTGCCGGCAAGCAGCTCGAGGACGGCCGGACCCTGAGCGACTACAACATCCAGAAGG 4593133
Query 178111 AATCAACACTGCATCTTGT 178129
| || || || || || ||
Sbjct 4593132 AGTCGACGCTCCACCTCGT 4593114
Score = 123 bits (136), Expect = 6e-23
Identities = 153/207 (74%), Gaps = 2/207 (1%)
Strand=Plus/Minus
Query 177924 CAAATTTTCGTGAAAACTCTCACAGGAAAAACGATCACCCTCGAGGTGGAAAGCTCAGAC 177983
|| || ||||| || || | || || || |||||||| | ||||||||| || |||
Sbjct 4593091 CAGATCTTCGTCAAGACGTTGACCGGCAAGACGATCACGTTGGAGGTGGAATCGTCGGAC 4593032
Query 177984 ACCATCGAGAACGTCAAACAAAAGATTCAGGACAAAGAAGGAATCCCTCCGGACCAGCAA 178043
|| ||||| ||||| || |||||||||||||| || || ||||| || ||||||||
Sbjct 4593031 ACAATCGACAACGTAAAGAGCAAGATTCAGGACAAGGAGGGCATCCCGCCCGACCAGCAG 4592972
Query 178044 CGACTTATCTTCGCCGGAAAACAGCTCGAAGATGGAAGGACTCTTG-CCGATTATAACGT 178102
|| || || |||||||| || |||||||| || || | || |||| ||| || ||| |
Sbjct 4592971 CGCCTGATTTTCGCCGGCAAGCAGCTCGAGGACGGCCGTAC-CTTGAGCGACTACAACAT 4592913
Query 178103 CCAAAAAGAATCAACACTGCATCTTGT 178129
||| || || || || ||||||||
Sbjct 4592912 CCAGAAGGAGAGCACTCTACATCTTGT 4592886
>seq1
Length=12542233
Score = 118 bits (130), Expect = 3e-21
Identities = 134/180 (74%), Gaps = 0/180 (0%)
Strand=Plus/Minus
Query 177929 TTTCGTGAAAACTCTCACAGGAAAAACGATCACCCTCGAGGTGGAAAGCTCAGACACCAT 177988
||||||||| || || || || || ||||| || || || || || || ||||| ||
Sbjct 3488469 TTTCGTGAAGACCCTAACGGGCAAGACGATTACGCTTGAAGTCGAGTCTTCTGACACTAT 3488410
Query 177989 CGAGAACGTCAAACAAAAGATTCAGGACAAAGAAGGAATCCCTCCGGACCAGCAACGACT 178048
||| || ||||| ||||| |||||||| || || || || ||||| |||||| || |
Sbjct 3488409 CGACAATGTCAAGTCCAAGATCCAGGACAAGGAGGGCATTCCCCCGGATCAGCAAAGATT 3488350
Query 178049 TATCTTCGCCGGAAAACAGCTCGAAGATGGAAGGACTCTTGCCGATTATAACGTCCAAAA 178108
||||| || || || ||||||||||||||| ||||| | | || || ||| |||| ||
Sbjct 3488349 GATCTTTGCTGGTAAGCAGCTCGAAGATGGACGGACTTTGTCGGACTACAACATCCAGAA 3488290
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 1203730768161432
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |