Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Drechmeria_20coniospora_20[genbank_20GCA_5F001625195.1_202016-04-24]
28 sequences; 32,831,003 total letters
Query= NC_033780.1
Length=144510
Score E
Sequences producing significant alignments: (Bits) Value
seq3 176 4e-39
seq1 93.3 4e-14
>seq3
Length=9751215
Score = 176 bits (194), Expect = 4e-39
Identities = 181/234 (77%), Gaps = 2/234 (1%)
Strand=Plus/Plus
Query 41633 CCGCCGCCGCGTAGACGTAACACCAGATGCAGCGTGCTCTCCTTCTGAATGTTATAGTCG 41692
|| || || || || || | ||| || ||||| |||||||||||||| ||||| ||||||
Sbjct 625469 CCACCACCACGGAGGCGCAGCACGAGGTGCAGGGTGCTCTCCTTCTGGATGTTGTAGTCG 625528
Query 41693 GAGAGGGTGCGCTCGTCGTCGAGCTGCTTGCCGGCGAATATCAGGCGCTGTTGGTCCGCG 41752
|||||||| | || |||||||||||||||||||| || |||||||||||||| | |
Sbjct 625529 CTCAGGGTGCGGCCATCCTCGAGCTGCTTGCCGGCGAAGATGAGGCGCTGTTGGTCGGGG 625588
Query 41753 GGAACGCTCTCCTTGTCCATGATTTTTTGCTTCAACGACGAC-ACAGTGTCGCTCGACTC 41811
|| | || |||||||||| ||| || ||| ||| | | | |||||| |||||
Sbjct 625589 GGGATGCCCTCCTTGTCCTGGATCTTGGACTT-GACGTTGTCGATGGTGTCGGAAGACTC 625647
Query 41812 CACCTCCACCGTTATCGTTTTACCCGTCAGCGTCTTTACGAAAATCTGCATGTT 41865
|||||| | || ||||| || ||||| || ||||| |||||||||||||| ||
Sbjct 625648 CACCTCAAGGGTGATCGTCTTCCCCGTGAGGGTCTTGACGAAAATCTGCATCTT 625701
Score = 172 bits (190), Expect = 5e-38
Identities = 180/231 (78%), Gaps = 4/231 (2%)
Strand=Plus/Plus
Query 41635 GCCGCCGCGTAGACGTAACACCAGATGCAGCGTGCTCTCCTTCTGAATGTTATAGTCGGA 41694
||||||||| || || | || ||||| || |||||||||||||| ||||| ||||||
Sbjct 4592867 GCCGCCGCGCAGGCGCAGTACAAGATGTAGAGTGCTCTCCTTCTGGATGTTGTAGTCGCT 4592926
Query 41695 GAGGGTGCGCTCGTCGTCGAGCTGCTTGCCGGCGAATATCAGGCGCTGTTGGTCCGCGGG 41754
| ||| || |||| |||||||||||||||||||| ||||||||||| ||||| | ||
Sbjct 4592927 CAAGGTACGGCCGTCCTCGAGCTGCTTGCCGGCGAAAATCAGGCGCTGCTGGTCGGGCGG 4592986
Query 41755 AACGCTCTCCTTGTCCATGATTTTTTGCT-TCAACGACGAC-ACAGTGTCGCTCGACTCC 41812
| || |||||||||| ||| | ||||| | ||| | | | ||||| ||| |||
Sbjct 4592987 GATGCCCTCCTTGTCC-TGA-ATCTTGCTCTTTACGTTGTCGATTGTGTCCGACGATTCC 4593044
Query 41813 ACCTCCACCGTTATCGTTTTACCCGTCAGCGTCTTTACGAAAATCTGCATG 41863
||||||| ||| ||||| || || |||| |||||| ||||| |||||||||
Sbjct 4593045 ACCTCCAACGTGATCGTCTTGCCGGTCAACGTCTTGACGAAGATCTGCATG 4593095
Score = 122 bits (134), Expect = 8e-23
Identities = 160/220 (73%), Gaps = 4/220 (2%)
Strand=Plus/Plus
Query 41635 GCCGCCGCGTAGACGTAACACCAGATGCAGCGTGCTCTCCTTCTGAATGTTATAGTCGGA 41694
||| ||||| ||||| | || || || ||||| ||||||||| ||||| ||||||
Sbjct 4593095 GCCACCGCGGAGACGGAGGACGAGGTGGAGCGTCGACTCCTTCTGGATGTTGTAGTCGCT 4593154
Query 41695 GAGGGTGCGCTCGTCGTCGAGCTGCTTGCCGGCGAATATCAGGCGCTGTTGGTCCGCGGG 41754
||||| || |||| ||||||||||||||||| || || ||||| || ||||| | ||
Sbjct 4593155 CAGGGTCCGGCCGTCCTCGAGCTGCTTGCCGGCAAAGATGAGGCGTTGCTGGTCAGGCGG 4593214
Query 41755 AACGCTCTCCTTGTCCATGATTTTTTGCTT--CAACGACGACACAGTGTCGCTCGACTCC 41812
| || |||||||||| ||| || ||| || | || | ||||| ||||||
Sbjct 4593215 GATGCCCTCCTTGTCCTGGATCTTCGACTTGACATTGTCG--ATTGTGTCCGAAGACTCC 4593272
Query 41813 ACCTCCACCGTTATCGTTTTACCCGTCAGCGTCTTTACGA 41852
||||| | || || || || ||||| || ||||| ||||
Sbjct 4593273 ACCTCGAGGGTGATGGTCTTGCCCGTGAGTGTCTTGACGA 4593312
Score = 118 bits (130), Expect = 1e-21
Identities = 151/206 (73%), Gaps = 4/206 (2%)
Strand=Plus/Plus
Query 41635 GCCGCCGCGTAGACGTAACACCAGATGCAGCGTGCTCTCCTTCTGAATGTTATAGTCGGA 41694
|||||| || || || | || || || ||||| ||||||||| ||||| || |||||
Sbjct 4593387 GCCGCCACGAAGGCGGAGGACGAGGTGGAGCGTCGACTCCTTCTGGATGTTGTAATCGGA 4593446
Query 41695 GAGGGTGCGCTCGTCGTCGAGCTGCTTGCCGGCGAATATCAGGCGCTGTTGGTCCGCGGG 41754
| ||| || | || |||||||||||||||||||| ||||||||||| ||||| | ||
Sbjct 4593447 CAAGGTCCGGCCATCCTCGAGCTGCTTGCCGGCGAAAATCAGGCGCTGCTGGTCGGGAGG 4593506
Query 41755 AACGCTCTCCTTGTCCATGATTTTTTGCTT--CAACGACGACACAGTGTCGCTCGACTCC 41812
| || |||||||||| ||| || ||| || | || | ||||| ||||||
Sbjct 4593507 GATGCCCTCCTTGTCCTGGATCTTCGACTTGACATTGTCG--ATCGTGTCCGACGACTCG 4593564
Query 41813 ACCTCCACCGTTATCGTTTTACCCGT 41838
||||| | ||| || || || |||||
Sbjct 4593565 ACCTCAAGCGTGATGGTCTTGCCCGT 4593590
Score = 105 bits (116), Expect = 6e-18
Identities = 91/113 (81%), Gaps = 0/113 (0%)
Strand=Plus/Plus
Query 85800 CGTATCGCACCTCGTTCCGGCCTCGCCAGCAAGCACGGTATCGACGTGGGCGCCGGGGTC 85859
|| ||||| || ||||| ||||||||| |||||||| |||||| ||| || || |||
Sbjct 6510193 CGGATCGCGCCACGTTCTGGCCTCGCCTGCAAGCACTTCATCGACACGGGTGCGGGCGTC 6510252
Query 85860 ATCGACGCCGACTACCGCGGAAACGTCATCATCGTACTCTTCAACCACGGCGA 85912
||||| |||||||||||||| | |||| ||| | ||||||||||||| |||
Sbjct 6510253 ATCGATGCCGACTACCGCGGCCAGGTCAAAATCCTGCTCTTCAACCACGCCGA 6510305
>seq1
Length=12542233
Score = 93.3 bits (102), Expect = 4e-14
Identities = 132/184 (72%), Gaps = 4/184 (2%)
Strand=Plus/Plus
Query 41673 CCTTCTGAATGTTATAGTCGGAGAGGGTGCGCTCGTCGTCGAGCTGCTTGCCGGCGAATA 41732
||||||| ||||| ||||| || | || || | || ||||||||||| || || || |
Sbjct 3488288 CCTTCTGGATGTTGTAGTCCGACAAAGTCCGTCCATCTTCGAGCTGCTTACCAGCAAAGA 3488347
Query 41733 TCAGGCGCTGTTGGTCCGCGGGAACGCTCTCCTTGTCCATGATTTTTTGCTT--CAACGA 41790
||| | || || |||| ||||| || |||||||||| ||| || ||| || |
Sbjct 3488348 TCAATCTTTGCTGATCCGGGGGAATGCCCTCCTTGTCCTGGATCTTGGACTTGACATTGT 3488407
Query 41791 CGACACAGTGTCGCTCGACTCCACCTCCACCGTTATCGTTTTACCCGTCAGCGTCTTTAC 41850
|| | |||||| ||||| || || | ||| ||||| || ||||| || ||||| ||
Sbjct 3488408 CG--ATAGTGTCAGAAGACTCGACTTCAAGCGTAATCGTCTTGCCCGTTAGGGTCTTCAC 3488465
Query 41851 GAAA 41854
||||
Sbjct 3488466 GAAA 3488469
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 462303838193600
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