Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Drechmeria_20coniospora_20[genbank_20GCA_5F001625195.1_202016-04-24] 28 sequences; 32,831,003 total letters Query= NC_033780.1 Length=144510 Score E Sequences producing significant alignments: (Bits) Value seq3 176 4e-39 seq1 93.3 4e-14 >seq3 Length=9751215 Score = 176 bits (194), Expect = 4e-39 Identities = 181/234 (77%), Gaps = 2/234 (1%) Strand=Plus/Plus Query 41633 CCGCCGCCGCGTAGACGTAACACCAGATGCAGCGTGCTCTCCTTCTGAATGTTATAGTCG 41692 || || || || || || | ||| || ||||| |||||||||||||| ||||| |||||| Sbjct 625469 CCACCACCACGGAGGCGCAGCACGAGGTGCAGGGTGCTCTCCTTCTGGATGTTGTAGTCG 625528 Query 41693 GAGAGGGTGCGCTCGTCGTCGAGCTGCTTGCCGGCGAATATCAGGCGCTGTTGGTCCGCG 41752 |||||||| | || |||||||||||||||||||| || |||||||||||||| | | Sbjct 625529 CTCAGGGTGCGGCCATCCTCGAGCTGCTTGCCGGCGAAGATGAGGCGCTGTTGGTCGGGG 625588 Query 41753 GGAACGCTCTCCTTGTCCATGATTTTTTGCTTCAACGACGAC-ACAGTGTCGCTCGACTC 41811 || | || |||||||||| ||| || ||| ||| | | | |||||| ||||| Sbjct 625589 GGGATGCCCTCCTTGTCCTGGATCTTGGACTT-GACGTTGTCGATGGTGTCGGAAGACTC 625647 Query 41812 CACCTCCACCGTTATCGTTTTACCCGTCAGCGTCTTTACGAAAATCTGCATGTT 41865 |||||| | || ||||| || ||||| || ||||| |||||||||||||| || Sbjct 625648 CACCTCAAGGGTGATCGTCTTCCCCGTGAGGGTCTTGACGAAAATCTGCATCTT 625701 Score = 172 bits (190), Expect = 5e-38 Identities = 180/231 (78%), Gaps = 4/231 (2%) Strand=Plus/Plus Query 41635 GCCGCCGCGTAGACGTAACACCAGATGCAGCGTGCTCTCCTTCTGAATGTTATAGTCGGA 41694 ||||||||| || || | || ||||| || |||||||||||||| ||||| |||||| Sbjct 4592867 GCCGCCGCGCAGGCGCAGTACAAGATGTAGAGTGCTCTCCTTCTGGATGTTGTAGTCGCT 4592926 Query 41695 GAGGGTGCGCTCGTCGTCGAGCTGCTTGCCGGCGAATATCAGGCGCTGTTGGTCCGCGGG 41754 | ||| || |||| |||||||||||||||||||| ||||||||||| ||||| | || Sbjct 4592927 CAAGGTACGGCCGTCCTCGAGCTGCTTGCCGGCGAAAATCAGGCGCTGCTGGTCGGGCGG 4592986 Query 41755 AACGCTCTCCTTGTCCATGATTTTTTGCT-TCAACGACGAC-ACAGTGTCGCTCGACTCC 41812 | || |||||||||| ||| | ||||| | ||| | | | ||||| ||| ||| Sbjct 4592987 GATGCCCTCCTTGTCC-TGA-ATCTTGCTCTTTACGTTGTCGATTGTGTCCGACGATTCC 4593044 Query 41813 ACCTCCACCGTTATCGTTTTACCCGTCAGCGTCTTTACGAAAATCTGCATG 41863 ||||||| ||| ||||| || || |||| |||||| ||||| ||||||||| Sbjct 4593045 ACCTCCAACGTGATCGTCTTGCCGGTCAACGTCTTGACGAAGATCTGCATG 4593095 Score = 122 bits (134), Expect = 8e-23 Identities = 160/220 (73%), Gaps = 4/220 (2%) Strand=Plus/Plus Query 41635 GCCGCCGCGTAGACGTAACACCAGATGCAGCGTGCTCTCCTTCTGAATGTTATAGTCGGA 41694 ||| ||||| ||||| | || || || ||||| ||||||||| ||||| |||||| Sbjct 4593095 GCCACCGCGGAGACGGAGGACGAGGTGGAGCGTCGACTCCTTCTGGATGTTGTAGTCGCT 4593154 Query 41695 GAGGGTGCGCTCGTCGTCGAGCTGCTTGCCGGCGAATATCAGGCGCTGTTGGTCCGCGGG 41754 ||||| || |||| ||||||||||||||||| || || ||||| || ||||| | || Sbjct 4593155 CAGGGTCCGGCCGTCCTCGAGCTGCTTGCCGGCAAAGATGAGGCGTTGCTGGTCAGGCGG 4593214 Query 41755 AACGCTCTCCTTGTCCATGATTTTTTGCTT--CAACGACGACACAGTGTCGCTCGACTCC 41812 | || |||||||||| ||| || ||| || | || | ||||| |||||| Sbjct 4593215 GATGCCCTCCTTGTCCTGGATCTTCGACTTGACATTGTCG--ATTGTGTCCGAAGACTCC 4593272 Query 41813 ACCTCCACCGTTATCGTTTTACCCGTCAGCGTCTTTACGA 41852 ||||| | || || || || ||||| || ||||| |||| Sbjct 4593273 ACCTCGAGGGTGATGGTCTTGCCCGTGAGTGTCTTGACGA 4593312 Score = 118 bits (130), Expect = 1e-21 Identities = 151/206 (73%), Gaps = 4/206 (2%) Strand=Plus/Plus Query 41635 GCCGCCGCGTAGACGTAACACCAGATGCAGCGTGCTCTCCTTCTGAATGTTATAGTCGGA 41694 |||||| || || || | || || || ||||| ||||||||| ||||| || ||||| Sbjct 4593387 GCCGCCACGAAGGCGGAGGACGAGGTGGAGCGTCGACTCCTTCTGGATGTTGTAATCGGA 4593446 Query 41695 GAGGGTGCGCTCGTCGTCGAGCTGCTTGCCGGCGAATATCAGGCGCTGTTGGTCCGCGGG 41754 | ||| || | || |||||||||||||||||||| ||||||||||| ||||| | || Sbjct 4593447 CAAGGTCCGGCCATCCTCGAGCTGCTTGCCGGCGAAAATCAGGCGCTGCTGGTCGGGAGG 4593506 Query 41755 AACGCTCTCCTTGTCCATGATTTTTTGCTT--CAACGACGACACAGTGTCGCTCGACTCC 41812 | || |||||||||| ||| || ||| || | || | ||||| |||||| Sbjct 4593507 GATGCCCTCCTTGTCCTGGATCTTCGACTTGACATTGTCG--ATCGTGTCCGACGACTCG 4593564 Query 41813 ACCTCCACCGTTATCGTTTTACCCGT 41838 ||||| | ||| || || || ||||| Sbjct 4593565 ACCTCAAGCGTGATGGTCTTGCCCGT 4593590 Score = 105 bits (116), Expect = 6e-18 Identities = 91/113 (81%), Gaps = 0/113 (0%) Strand=Plus/Plus Query 85800 CGTATCGCACCTCGTTCCGGCCTCGCCAGCAAGCACGGTATCGACGTGGGCGCCGGGGTC 85859 || ||||| || ||||| ||||||||| |||||||| |||||| ||| || || ||| Sbjct 6510193 CGGATCGCGCCACGTTCTGGCCTCGCCTGCAAGCACTTCATCGACACGGGTGCGGGCGTC 6510252 Query 85860 ATCGACGCCGACTACCGCGGAAACGTCATCATCGTACTCTTCAACCACGGCGA 85912 ||||| |||||||||||||| | |||| ||| | ||||||||||||| ||| Sbjct 6510253 ATCGATGCCGACTACCGCGGCCAGGTCAAAATCCTGCTCTTCAACCACGCCGA 6510305 >seq1 Length=12542233 Score = 93.3 bits (102), Expect = 4e-14 Identities = 132/184 (72%), Gaps = 4/184 (2%) Strand=Plus/Plus Query 41673 CCTTCTGAATGTTATAGTCGGAGAGGGTGCGCTCGTCGTCGAGCTGCTTGCCGGCGAATA 41732 ||||||| ||||| ||||| || | || || | || ||||||||||| || || || | Sbjct 3488288 CCTTCTGGATGTTGTAGTCCGACAAAGTCCGTCCATCTTCGAGCTGCTTACCAGCAAAGA 3488347 Query 41733 TCAGGCGCTGTTGGTCCGCGGGAACGCTCTCCTTGTCCATGATTTTTTGCTT--CAACGA 41790 ||| | || || |||| ||||| || |||||||||| ||| || ||| || | Sbjct 3488348 TCAATCTTTGCTGATCCGGGGGAATGCCCTCCTTGTCCTGGATCTTGGACTTGACATTGT 3488407 Query 41791 CGACACAGTGTCGCTCGACTCCACCTCCACCGTTATCGTTTTACCCGTCAGCGTCTTTAC 41850 || | |||||| ||||| || || | ||| ||||| || ||||| || ||||| || Sbjct 3488408 CG--ATAGTGTCAGAAGACTCGACTTCAAGCGTAATCGTCTTGCCCGTTAGGGTCTTCAC 3488465 Query 41851 GAAA 41854 |||| Sbjct 3488466 GAAA 3488469 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 462303838193600