Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Elaphomyces_20granulatus_20[genbank_20GCA_5F002240705.1_202017-08- 04] 8,670 sequences; 54,153,615 total letters Query= NC_001266.1 Length=159857 Score E Sequences producing significant alignments: (Bits) Value seq5240 91.5 2e-13 >seq5240 Length=8030 Score = 91.5 bits (100), Expect = 2e-13 Identities = 175/256 (68%), Gaps = 3/256 (1%) Strand=Plus/Plus Query 16502 TCTGAGTGTATGTTCTCTATGGCTATCTGAAATCCATAGAAGCATCGAGCCTCCGCTATT 16561 |||||||| ||||| || || |||||||||||||||||||| ||||| || | || Sbjct 4586 TCTGAGTGGATGTTTTCCATCATGATCTGAAATCCATAGAAGCAACGAGCTTCAGGGATC 4645 Query 16562 TGTACTTCCACGTAAAATCGTTCCGCCAGGTTCTCATTCACGATACCGTCACTTGCAGCA 16621 || || || || || || || |||||||||| || ||||| || || || ||| Sbjct 4646 TGGACCTCGCCGCTGAAGCGCTCGACCAGGTTCTCGTTGACGATGCCATCTGACGCGGCA 4705 Query 16622 AAAAACGCCAATATGTGCTTAATGAAATATTTTTCGTCA--GATG-TAAGAATATGCCAA 16678 || ||||||| | | |||||| || || ||| | || | | | ||| Sbjct 4706 AAGAACGCCAGGACACGGGAAATGAAGTACCGCTCATCATTGTTGAGGCGGTTGTTCCAG 4765 Query 16679 TCTTTTAAATCTTTGGATATATCCACTTCTTCTGGCGTCCAAAAGCTAGCCACTGCCTTT 16738 |||| | ||||||||||| ||| | ||||| | |||||| || || | || || Sbjct 4766 TCTTGCAGATCTTTGGATAGATCAATCTCTTCAGCCGTCCAGAATGACGCTTCGGCTTTC 4825 Query 16739 TTATACATTTTCCAAA 16754 || ||||||| ||||| Sbjct 4826 TTGTACATTTGCCAAA 4841 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 511358975464400