Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Elaphomyces_20granulatus_20[genbank_20GCA_5F002240705.1_202017-08-
04] 8,670 sequences; 54,153,615 total letters
Query= NC_001266.1
Length=159857
Score E
Sequences producing significant alignments: (Bits) Value
seq5240 91.5 2e-13
>seq5240
Length=8030
Score = 91.5 bits (100), Expect = 2e-13
Identities = 175/256 (68%), Gaps = 3/256 (1%)
Strand=Plus/Plus
Query 16502 TCTGAGTGTATGTTCTCTATGGCTATCTGAAATCCATAGAAGCATCGAGCCTCCGCTATT 16561
|||||||| ||||| || || |||||||||||||||||||| ||||| || | ||
Sbjct 4586 TCTGAGTGGATGTTTTCCATCATGATCTGAAATCCATAGAAGCAACGAGCTTCAGGGATC 4645
Query 16562 TGTACTTCCACGTAAAATCGTTCCGCCAGGTTCTCATTCACGATACCGTCACTTGCAGCA 16621
|| || || || || || || |||||||||| || ||||| || || || |||
Sbjct 4646 TGGACCTCGCCGCTGAAGCGCTCGACCAGGTTCTCGTTGACGATGCCATCTGACGCGGCA 4705
Query 16622 AAAAACGCCAATATGTGCTTAATGAAATATTTTTCGTCA--GATG-TAAGAATATGCCAA 16678
|| ||||||| | | |||||| || || ||| | || | | | |||
Sbjct 4706 AAGAACGCCAGGACACGGGAAATGAAGTACCGCTCATCATTGTTGAGGCGGTTGTTCCAG 4765
Query 16679 TCTTTTAAATCTTTGGATATATCCACTTCTTCTGGCGTCCAAAAGCTAGCCACTGCCTTT 16738
|||| | ||||||||||| ||| | ||||| | |||||| || || | || ||
Sbjct 4766 TCTTGCAGATCTTTGGATAGATCAATCTCTTCAGCCGTCCAGAATGACGCTTCGGCTTTC 4825
Query 16739 TTATACATTTTCCAAA 16754
|| ||||||| |||||
Sbjct 4826 TTGTACATTTGCCAAA 4841
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 511358975464400
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |