Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Elaphomyces_20granulatus_20[genbank_20GCA_5F002240705.1_202017-08-
04] 8,670 sequences; 54,153,615 total letters
Query= NC_001650.2
Length=184439
Score E
Sequences producing significant alignments: (Bits) Value
seq6745 102 1e-16
>seq6745
Length=2379
Score = 102 bits (112), Expect = 1e-16
Identities = 193/278 (69%), Gaps = 12/278 (4%)
Strand=Plus/Plus
Query 145995 GAGCTGGTCCACGCCCTGCCCCCGGTAATCTGTCTTGGAGTCCACGTACGCGGCCCCGAA 146054
||||||||| ||||| || || ||||| || |||||||| || |||| || ||
Sbjct 1421 GAGCTGGTCGACGCCTTGGCCAGTATAATCGGTGCGTGAGTCCACATATTCGGCGCCAAA 1480
Query 146055 GTGCCTCCACTGGAACCCGTAGACGGGCCCCAGGTCCCCG--GGCTCCCTGTGCCCCAGC 146112
|||| ||||||||| || || | || |||||||| || ||| | |||| | | |
Sbjct 1481 ATGCCGCCACTGGAAGCCATATATAGGACCCAGGTCTCCAACGGCACGGTGTGAC--AAC 1538
Query 146113 CCGGCCCGGGCGAGGAAGTCCCGGGACCCGTTGGCGTCCCAGATCTTGACGCC--CCTCG 146170
|| | | | ||||||| || || |||||||| | ||||||||||| ||||| ||||
Sbjct 1539 CCCACGCTGTCGAGGAACTCACGCGACCCGTTACCATCCCAGATCTTCACGCCTGCCTCA 1598
Query 146171 CGGA--GAGCTCATTGGAGTCCGTGGACCCCCTGATGAACCAGAGCAGCTCTTCGAGGAC 146228
| | ||| | | || |||| ||| || ||||| |||||||| ||| |||
Sbjct 1599 CTCAACGAG---AGAGAAG-ACGTGTTGCCCTCAATAAACCACAGCAGCTCGGCGATGAC 1654
Query 146229 CCCCCTCCAGAAGACCCTCTTGGTGGTCAGCAGGGGGA 146266
||| |||||| | ||| || |||||||| ||||
Sbjct 1655 GGCCCGGTGGAAGACGCGCTTCGTCGTCAGCAGCGGGA 1692
Score = 87.8 bits (96), Expect = 2e-12
Identities = 196/290 (68%), Gaps = 7/290 (2%)
Strand=Plus/Plus
Query 145567 TGGGGGTGGTAGCCCTCCAGCGCAAAGTCCTCCGCCCTGAAGTCATCTATG--TCCTCCA 145624
||||| | || |||| | | |||||||||||||| | || |||| || ||||||
Sbjct 936 TGGGGATTATATCCCTTGATCACAAAGTCCTCCGCCTTCCAGCCATCAATACTTCCTCCT 995
Query 145625 CCC--GCCTCAGGATCCTGAGCCTGGGAAAGGGCCGGGGGCTCCTGGTC-AGCTGGAGCT 145681
|| || | | || | | ||||| | | ||||||| | || |||||| ||
Sbjct 996 TCCTTGCGTGTAATTACTAATTCAGGGAACTGTC--GGGGCTCACGTTCCAGCTGGGTCT 1053
Query 145682 TCAGGGGCTCCACGTGGTTGAGGTAGACGTGCGCGTCCCCCAGGACGTGGATGAAGTCCC 145741
| || | || || |||| || ||||| ||||| || |||| ||| || | | | |
Sbjct 1054 TGAGTGCATCGACATGGTCGACATAGACATGCGCATCACCCATGACATGTGTTAGGCTAC 1113
Query 145742 CGGGCTCGAGGCCCGTGAGGTGGGCGACCATGTAGGTCAGCAGGGAGTAGCTGGCTATGT 145801
|||| | || | | ||| |||| ||||| ||||| || | || ||||| ||||
Sbjct 1114 CGGGAACTAGATCGCAAACGTGTGCGATCATGTGCGTCAGAAGTGCATAACTGGCGATGT 1173
Query 145802 TGAAGGGCACCCCCAGCCCCATGTCCCCCGAGCGCTGGTACAGCTGGCAG 145851
|||| || || || || ||||| || | || ||||| ||||||||||||
Sbjct 1174 TGAATGGAACGCCGAGACCCATATCGCAGGATCGCTGATACAGCTGGCAG 1223
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 590012850426800
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |