Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Elaphomyces_20granulatus_20[genbank_20GCA_5F002240705.1_202017-08- 04] 8,670 sequences; 54,153,615 total letters Query= NC_001650.2 Length=184439 Score E Sequences producing significant alignments: (Bits) Value seq6745 102 1e-16 >seq6745 Length=2379 Score = 102 bits (112), Expect = 1e-16 Identities = 193/278 (69%), Gaps = 12/278 (4%) Strand=Plus/Plus Query 145995 GAGCTGGTCCACGCCCTGCCCCCGGTAATCTGTCTTGGAGTCCACGTACGCGGCCCCGAA 146054 ||||||||| ||||| || || ||||| || |||||||| || |||| || || Sbjct 1421 GAGCTGGTCGACGCCTTGGCCAGTATAATCGGTGCGTGAGTCCACATATTCGGCGCCAAA 1480 Query 146055 GTGCCTCCACTGGAACCCGTAGACGGGCCCCAGGTCCCCG--GGCTCCCTGTGCCCCAGC 146112 |||| ||||||||| || || | || |||||||| || ||| | |||| | | | Sbjct 1481 ATGCCGCCACTGGAAGCCATATATAGGACCCAGGTCTCCAACGGCACGGTGTGAC--AAC 1538 Query 146113 CCGGCCCGGGCGAGGAAGTCCCGGGACCCGTTGGCGTCCCAGATCTTGACGCC--CCTCG 146170 || | | | ||||||| || || |||||||| | ||||||||||| ||||| |||| Sbjct 1539 CCCACGCTGTCGAGGAACTCACGCGACCCGTTACCATCCCAGATCTTCACGCCTGCCTCA 1598 Query 146171 CGGA--GAGCTCATTGGAGTCCGTGGACCCCCTGATGAACCAGAGCAGCTCTTCGAGGAC 146228 | | ||| | | || |||| ||| || ||||| |||||||| ||| ||| Sbjct 1599 CTCAACGAG---AGAGAAG-ACGTGTTGCCCTCAATAAACCACAGCAGCTCGGCGATGAC 1654 Query 146229 CCCCCTCCAGAAGACCCTCTTGGTGGTCAGCAGGGGGA 146266 ||| |||||| | ||| || |||||||| |||| Sbjct 1655 GGCCCGGTGGAAGACGCGCTTCGTCGTCAGCAGCGGGA 1692 Score = 87.8 bits (96), Expect = 2e-12 Identities = 196/290 (68%), Gaps = 7/290 (2%) Strand=Plus/Plus Query 145567 TGGGGGTGGTAGCCCTCCAGCGCAAAGTCCTCCGCCCTGAAGTCATCTATG--TCCTCCA 145624 ||||| | || |||| | | |||||||||||||| | || |||| || |||||| Sbjct 936 TGGGGATTATATCCCTTGATCACAAAGTCCTCCGCCTTCCAGCCATCAATACTTCCTCCT 995 Query 145625 CCC--GCCTCAGGATCCTGAGCCTGGGAAAGGGCCGGGGGCTCCTGGTC-AGCTGGAGCT 145681 || || | | || | | ||||| | | ||||||| | || |||||| || Sbjct 996 TCCTTGCGTGTAATTACTAATTCAGGGAACTGTC--GGGGCTCACGTTCCAGCTGGGTCT 1053 Query 145682 TCAGGGGCTCCACGTGGTTGAGGTAGACGTGCGCGTCCCCCAGGACGTGGATGAAGTCCC 145741 | || | || || |||| || ||||| ||||| || |||| ||| || | | | | Sbjct 1054 TGAGTGCATCGACATGGTCGACATAGACATGCGCATCACCCATGACATGTGTTAGGCTAC 1113 Query 145742 CGGGCTCGAGGCCCGTGAGGTGGGCGACCATGTAGGTCAGCAGGGAGTAGCTGGCTATGT 145801 |||| | || | | ||| |||| ||||| ||||| || | || ||||| |||| Sbjct 1114 CGGGAACTAGATCGCAAACGTGTGCGATCATGTGCGTCAGAAGTGCATAACTGGCGATGT 1173 Query 145802 TGAAGGGCACCCCCAGCCCCATGTCCCCCGAGCGCTGGTACAGCTGGCAG 145851 |||| || || || || ||||| || | || ||||| |||||||||||| Sbjct 1174 TGAATGGAACGCCGAGACCCATATCGCAGGATCGCTGATACAGCTGGCAG 1223 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 590012850426800