Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Elaphomyces_20granulatus_20[genbank_20GCA_5F002240705.1_202017-08- 04] 8,670 sequences; 54,153,615 total letters Query= NC_001824.1 Length=102653 Score E Sequences producing significant alignments: (Bits) Value seq3570 86.0 4e-12 >seq3570 Length=5510 Score = 86.0 bits (94), Expect = 4e-12 Identities = 113/157 (72%), Gaps = 0/157 (0%) Strand=Plus/Plus Query 12781 ATGGTCATGCGACTAGGAAAGGCATGTGGGTTAATGATTAAATCAGGTACTATGCCATCT 12840 || ||||| ||| |||| ||| || |||||||| |||| ||| || || || || ||| Sbjct 1890 ATAGTCATACGAGAGGGAATGGCGTGCGGGTTAATAATTAGATCCGGAACAATTCCTTCT 1949 Query 12841 TTAGTGAAAGGCATGTTTTCTTGGGCATAAATCATACCACAGGTACCTTTTTGTGCGGTA 12900 | ||||| ||||| | |||||| |||| | ||||| || || || ||| || Sbjct 1950 CTTGTGAACGGCATATCTTCTTGTCTATAAGTAATACCGATTGTGCCCTTCTGTCCGTGG 2009 Query 12901 AAAGAAGCAAATTTATCTCCTATTTCAGGTATTTTTG 12937 |||||||||||| ||||| || | ||| || |||| Sbjct 2010 CGAGAAGCAAATTTGTCTCCAATCTGAGGGATCTTTG 2046 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 328330103128180