Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Elaphomyces_20granulatus_20[genbank_20GCA_5F002240705.1_202017-08- 04] 8,670 sequences; 54,153,615 total letters Query= NC_002520.1 Length=232392 Score E Sequences producing significant alignments: (Bits) Value seq6412 89.7 8e-13 >seq6412 Length=17604 Score = 89.7 bits (98), Expect = 8e-13 Identities = 88/114 (77%), Gaps = 0/114 (0%) Strand=Plus/Plus Query 146074 ATGTAAAGTAGATTCTTTAGATATATTATAATCTGAAAGAGTTCTGCTATCATCTAATTG 146133 ||| ||||| |||||||| ||||||||||| || | ||||||| ||| |||| ||| Sbjct 16511 ATGCAAAGTCGATTCTTTTTGGATATTATAATCAGATAACGTTCTGCCATCTTCTAGTTG 16570 Query 146134 TTTTCCAGCAAAAATCAATCTTTGCTGATCCGGAGGAATTCCTTCTTTATCTTG 146187 || ||||| || ||||| | |||||| || || || || || || |||||||| Sbjct 16571 CTTCCCAGCGAAGATCAACCGTTGCTGGTCGGGGGGGATACCCTCCTTATCTTG 16624 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 743445820326400