Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Elaphomyces_20granulatus_20[genbank_20GCA_5F002240705.1_202017-08-
04] 8,670 sequences; 54,153,615 total letters
Query= NC_002593.1
Length=100999
Score E
Sequences producing significant alignments: (Bits) Value
seq6412 84.2 1e-11
>seq6412
Length=17604
Score = 84.2 bits (92), Expect = 1e-11
Identities = 143/205 (70%), Gaps = 2/205 (1%)
Strand=Plus/Plus
Query 34162 TCCGCCGCGCAGCCTCAGCACCAGGTGTAAAGTACTTTCTTTCTGTATGTTGTAGTCGGA 34221
|||||| || || | || || || || ||||| || |||||||||||||| || ||
Sbjct 16943 TCCGCCACGGAGACGGAGGACGAGATGCAAAGTGGACTCCTTCTGTATGTTGTAATCAGA 17002
Query 34222 CAGCTGACGGTCGTCGTCCAACTGCTTGCCTGCGAAAATGAGCCGCTGCTGGTCGACGGG 34281
| | ||| | || |||| |||||||| || || || | |||||| ||||| |||
Sbjct 17003 TAACGTCCGGCCATCCTCCAGTTGCTTGCCAGCAAATATCAACCGCTGTTGGTCAGGGGG 17062
Query 34282 CACGCTCTCCTTGTCGGCTATCTTTTGCTTT-AGATCGGCTATCGAATCGGTCGATTCGA 34340
| || ||||||||| ||| || ||||| | | | |||| ||| |||| ||||
Sbjct 17063 GATGCCCTCCTTGTCCTGAATC-TTAGCTTTAACGTTATCAATCGTGTCGCTCGACTCGA 17121
Query 34341 CGTCCACCGTGATGGTTTTGCCGGT 34365
| || | |||||||| || || ||
Sbjct 17122 CCTCTAGGGTGATGGTCTTTCCCGT 17146
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 323037862395200
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |