Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Elaphomyces_20granulatus_20[genbank_20GCA_5F002240705.1_202017-08-
04] 8,670 sequences; 54,153,615 total letters
Query= NC_002816.1
Length=123500
Score E
Sequences producing significant alignments: (Bits) Value
seq3205 122 7e-23
seq6412 82.4 6e-11
>seq3205
Length=38634
Score = 122 bits (134), Expect = 7e-23
Identities = 136/182 (75%), Gaps = 0/182 (0%)
Strand=Plus/Plus
Query 45147 CCTTCTGAATGTTGTAGTCGTTCAGTTGGCGATCGTCGTCCAGTTGTTTTCCGGCGAATA 45206
|||||||||| ||||||||||||||| ||| |||| || ||||| ||||||||||| |
Sbjct 37384 CCTTCTGAATATTGTAGTCGTTCAGTGTCCGACCGTCCTCGAGTTGCTTTCCGGCGAAAA 37443
Query 45207 TCAACCGCTGTTGGTCGGGAGGCACACCCTCCTTGTCCGCAATTTTTTGCTTAACCGCCG 45266
| || |||||||| ||||| || | |||||||| ||| ||| || ||| ||
Sbjct 37444 TTAAACGCTGTTGATCGGGTGGAATCCCCTCCTTATCCTGAATCTTCGACTTCACATTGT 37503
Query 45267 CCACGCTGTCCCCACCCTCCACCTCCACGGTAATCGTCTTGCCCGTCAGAGTCTTCACAA 45326
| | |||| | ||| ||||| | |||||| ||||| |||||||| ||||| || |
Sbjct 37504 CGATTGTGTCGCTCGACTCTACCTCAAGGGTAATGGTCTTACCCGTCAGGGTCTTGACGA 37563
Query 45327 AG 45328
||
Sbjct 37564 AG 37565
>seq6412
Length=17604
Score = 82.4 bits (90), Expect = 6e-11
Identities = 130/181 (72%), Gaps = 4/181 (2%)
Strand=Plus/Plus
Query 45134 TGCAGCGTGCTCTCCTTCTGAATGTTGTAGTC-GTTCAGTTGGCGATCGTCGTCCAGTTG 45192
|||| ||| ||||||||| |||||||| || | | | | || | || ||||||||
Sbjct 16968 TGCAAAGTGGACTCCTTCTGTATGTTGTAATCAGATAACGTC-CGGCCATCCTCCAGTTG 17026
Query 45193 TTTTCCGGCGAATATCAACCGCTGTTGGTCGGGAGGCACACCCTCCTTGTCCGCAATTTT 45252
|| || || |||||||||||||||||||| || || | |||||||||||| || | |
Sbjct 17027 CTTGCCAGCAAATATCAACCGCTGTTGGTCAGGGGGGATGCCCTCCTTGTCCTGAA-TCT 17085
Query 45253 TTGCTTAACCGCCGCCACGC-TGTCCCCACCCTCCACCTCCACGGTAATCGTCTTGCCCG 45311
| |||| | || || | |||| | ||| ||||| | ||| || ||||| ||||
Sbjct 17086 TAGCTTTAACGTTATCAATCGTGTCGCTCGACTCGACCTCTAGGGTGATGGTCTTTCCCG 17145
Query 45312 T 45312
|
Sbjct 17146 T 17146
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 395033454132070
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |