Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Elaphomyces_20granulatus_20[genbank_20GCA_5F002240705.1_202017-08- 04] 8,670 sequences; 54,153,615 total letters Query= NC_003389.1 Length=146454 Score E Sequences producing significant alignments: (Bits) Value seq5240 82.4 7e-11 >seq5240 Length=8030 Score = 82.4 bits (90), Expect = 7e-11 Identities = 125/176 (71%), Gaps = 9/176 (5%) Strand=Plus/Plus Query 11666 ATTAGTTCATTAGAAAATGTTAATCCGGGCATCAATCCTCGtttttttATCCAAAATATA 11725 || || ||||| || ||||| |||||||||||||| || || || || | ||| || || Sbjct 4260 ATCAGCTCATTTGAGAATGTCAATCCGGGCATCAAGCCGCGCTTCTTCAACCAGAAGATG 4319 Query 11726 GCAGCAAATGAACCAGAAAAGAATATTCCCTCCACAGCTGCAAATGCTACTACTCTTTCT 11785 | |||||||||||| || || || || ||||| || || || || || || | || || Sbjct 4320 GAAGCAAATGAACCTGAGAAAAAGATACCCTCGACGGCAGCGAAGGCCACCAGTCGTTGG 4379 Query 11786 CCATATA------CCTTGTTGCTAGATATCCATTTTCTGGCCCAATCAGCTTTCTT 11835 || | |||||| || ||| ||| | ||||||||||||| ||||| Sbjct 4380 GCAAAAGTCGACTCCTTGTC-CTGGAT--CCAATGAATGGCCCAATCAGCCTTCTT 4432 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 468474023624800