Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Elaphomyces_20granulatus_20[genbank_20GCA_5F002240705.1_202017-08-
04] 8,670 sequences; 54,153,615 total letters
Query= NC_003389.1
Length=146454
Score E
Sequences producing significant alignments: (Bits) Value
seq5240 82.4 7e-11
>seq5240
Length=8030
Score = 82.4 bits (90), Expect = 7e-11
Identities = 125/176 (71%), Gaps = 9/176 (5%)
Strand=Plus/Plus
Query 11666 ATTAGTTCATTAGAAAATGTTAATCCGGGCATCAATCCTCGtttttttATCCAAAATATA 11725
|| || ||||| || ||||| |||||||||||||| || || || || | ||| || ||
Sbjct 4260 ATCAGCTCATTTGAGAATGTCAATCCGGGCATCAAGCCGCGCTTCTTCAACCAGAAGATG 4319
Query 11726 GCAGCAAATGAACCAGAAAAGAATATTCCCTCCACAGCTGCAAATGCTACTACTCTTTCT 11785
| |||||||||||| || || || || ||||| || || || || || || | || ||
Sbjct 4320 GAAGCAAATGAACCTGAGAAAAAGATACCCTCGACGGCAGCGAAGGCCACCAGTCGTTGG 4379
Query 11786 CCATATA------CCTTGTTGCTAGATATCCATTTTCTGGCCCAATCAGCTTTCTT 11835
|| | |||||| || ||| ||| | ||||||||||||| |||||
Sbjct 4380 GCAAAAGTCGACTCCTTGTC-CTGGAT--CCAATGAATGGCCCAATCAGCCTTCTT 4432
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 468474023624800
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |