Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Elaphomyces_20granulatus_20[genbank_20GCA_5F002240705.1_202017-08- 04] 8,670 sequences; 54,153,615 total letters Query= NC_005068.1 Length=110907 Score E Sequences producing significant alignments: (Bits) Value seq6412 102 6e-17 >seq6412 Length=17604 Score = 102 bits (112), Expect = 6e-17 Identities = 137/191 (72%), Gaps = 0/191 (0%) Strand=Plus/Plus Query 43931 TCTTTTTGAATATTATAATCGTTTAATTGACGCTCATCGTCCAATTGTTTTCCTGCAAAT 43990 |||||||| ||||||||||| ||| | |||| || | ||| || || || || Sbjct 16524 TCTTTTTGGATATTATAATCAGATAACGTTCTGCCATCTTCTAGTTGCTTCCCAGCGAAG 16583 Query 43991 ATCAACCGTTGCTGGTCCTGAGGTACACCTTCTTTATCTGAAATTTTTTGTTTGACCATA 44050 ||||||||||||||||| | || | ||| || |||||| |||||| ||||| || Sbjct 16584 ATCAACCGTTGCTGGTCGGGGGGGATACCCTCCTTATCTTGGATTTTTGACTTGACATTA 16643 Query 44051 GCAACAGTATCTGCCGGCTCCACATCGACCGTAATTGTTTTACCGGTTAAAGTCTTCACA 44110 | | || |||| || ||| || || | |||||| || || || |||| ||||| || Sbjct 16644 TCGATCGTGTCTGACGACTCGACTTCTAGCGTAATCGTCTTCCCAGTTAGGGTCTTGACG 16703 Query 44111 AATATTTGCAT 44121 || |||||||| Sbjct 16704 AAAATTTGCAT 16714 Score = 95.1 bits (104), Expect = 9e-15 Identities = 136/192 (71%), Gaps = 0/192 (0%) Strand=Plus/Plus Query 43930 CTCTTTTTGAATATTATAATCGTTTAATTGACGCTCATCGTCCAATTGTTTTCCTGCAAA 43989 |||||| || ||||||||||| | || | || |||| |||||| || ||||| Sbjct 16751 CTCTTTCTGGATATTATAATCAGACAGCGTCCGGCCGTCCTCCAGTTGTTTCCCAGCAAA 16810 Query 43990 TATCAACCGTTGCTGGTCCTGAGGTACACCTTCTTTATCTGAAATTTTTTGTTTGACCAT 44049 ||||||||||||||||| | || | || || ||||| || ||| |||||| | Sbjct 16811 GATCAACCGTTGCTGGTCGGGGGGGATGCCCTCCTTATCCTGGATCTTTGATTTGACATT 16870 Query 44050 AGCAACAGTATCTGCCGGCTCCACATCGACCGTAATTGTTTTACCGGTTAAAGTCTTCAC 44109 | | | ||||||| | ||| || || | |||||| || || || |||| ||||| || Sbjct 16871 ATCGATCGTATCTGATGACTCAACTTCTAGCGTAATCGTCTTCCCAGTTAGGGTCTTGAC 16930 Query 44110 AAATATTTGCAT 44121 || |||||||| Sbjct 16931 GAAAATTTGCAT 16942 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 354740112203160