Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Elaphomyces_20granulatus_20[genbank_20GCA_5F002240705.1_202017-08-
04] 8,670 sequences; 54,153,615 total letters
Query= NC_006639.1
Length=24748
Score E
Sequences producing significant alignments: (Bits) Value
seq7882 143 4e-30
seq4688 113 7e-21
>seq7882
Length=1382
Score = 143 bits (158), Expect = 4e-30
Identities = 192/267 (72%), Gaps = 0/267 (0%)
Strand=Plus/Minus
Query 16433 GCTAAGCGTCATCGCAGATCTCTTCGAGATAACATCCAAGGAATCACCAAGCCAGCTATC 16492
||||| |||||||| | | |||||| ||||| || ||||| || ||||| || |||||
Sbjct 332 GCTAAACGTCATCGTAAAGTTCTTCGTGATAATATTCAAGGTATTACCAAACCCGCTATA 273
Query 16493 CGTCGTCTGGCTCGTCGTGGTGGAGTCAAGCGTGTCTCTGGATTGGTCTATGAAGAGATT 16552
| | | || ||||||||||| || || ||| | || || ||| |||| ||||| | |
Sbjct 272 AGAAGATTAGCCCGTCGTGGTGGTGTTAAACGTATTTCAGGTTTGATCTACGAAGAAACT 213
Query 16553 CGTGATGTTTTGAAGATCTTCCTCAAGACCGTTATCCATGATGCTTTCCACTATACCGAG 16612
|||| ||||||||| | ||| | | | || || ||||| | ||||| ||
Sbjct 212 CGTGGCGTTTTGAAGGTGTTCTTGGAAAATGTAATAAGGGATGCCGTAACTTATACTGAA 153
Query 16613 CACGCTAAACGTAAGACTGTCACCTCCATGGATATCGTCTATGCATTGAAACGTCAAGGC 16672
||||| ||| | || || || ||| | ||||| | || ||||| ||||||||||||||
Sbjct 152 CACGCCAAAAGGAAAACCGTTACCGCTATGGACGTGGTTTATGCCTTGAAACGTCAAGGA 93
Query 16673 CGTAAGATTTATGGTTTTGGAAGTTAA 16699
|||| | || |||||||| |||||
Sbjct 92 CGTACTCTGTACGGTTTTGGGGGTTAA 66
>seq4688
Length=19631
Score = 113 bits (124), Expect = 7e-21
Identities = 119/157 (76%), Gaps = 0/157 (0%)
Strand=Plus/Minus
Query 16536 TGGTCTATGAAGAGATTCGTGATGTTTTGAAGATCTTCCTCAAGACCGTTATCCATGATG 16595
|| |||| ||||||| |||| ||| | || ||||||| || ||||||||| |||||
Sbjct 7567 TGATCTACGAAGAGACCCGTGGTGTACTCAAATCCTTCCTCGAGTCCGTTATCCGTGATG 7508
Query 16596 CTTTCCACTATACCGAGCACGCTAAACGTAAGACTGTCACCTCCATGGATATCGTCTATG 16655
| || ||| || |||||||| || || ||||||||||| ||| | ||| | |||||||
Sbjct 7507 CCGTCACCTACACTGAGCACGCCAAGCGCAAGACTGTCACTTCCCTCGATGTTGTCTATG 7448
Query 16656 CATTGAAACGTCAAGGCCGTAAGATTTATGGTTTTGG 16692
| | || || |||||||||| | | || ||||| ||
Sbjct 7447 CCCTCAAGCGCCAAGGCCGTACGCTGTACGGTTTCGG 7411
Score = 100 bits (110), Expect = 4e-17
Identities = 83/99 (84%), Gaps = 2/99 (2%)
Strand=Plus/Minus
Query 16433 GCTAAGCGTCATCGCA-GATCTCTTCGAGATAACATCCAAGGAATCACCAAGCCAGCTAT 16491
|| ||||||||||||| ||||| | || |||||||| || || || || ||||| || ||
Sbjct 7742 GCCAAGCGTCATCGCAAGATCT-TGCGTGATAACATTCAGGGCATTACGAAGCCTGCCAT 7684
Query 16492 CCGTCGTCTGGCTCGTCGTGGTGGAGTCAAGCGTGTCTC 16530
|||||||||||||| |||||||| ||||||||| ||||
Sbjct 7683 TCGTCGTCTGGCTCGCCGTGGTGGTGTCAAGCGTATCTC 7645
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 79067272958310
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |