Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Elaphomyces_20granulatus_20[genbank_20GCA_5F002240705.1_202017-08-
04] 8,670 sequences; 54,153,615 total letters
Query= NC_006998.1
Length=194711
Score E
Sequences producing significant alignments: (Bits) Value
seq5240 161 1e-34
>seq5240
Length=8030
Score = 161 bits (178), Expect = 1e-34
Identities = 337/500 (67%), Gaps = 3/500 (1%)
Strand=Plus/Plus
Query 33013 TTTTGGTATTCACCCACACGTTTTTCGAAAAAATTAGTTTTTCCTTCCAATGATATATTT 33072
|| || || || || ||||| || ||||| || || ||||| || |||| |||||| ||
Sbjct 3933 TTCTGATAGTCGCCGACACGCTTCTCGAAGAAGTTGGTTTTACCAGCCAAAGATATACTT 3992
Query 33073 TCCATGAAATCAAACGGATTGGTAACATTATAAAtttttttAAATCCCAATTCAGAAATC 33132
|||||||||||||| |||||||| ||||| || || || ||| | || |
Sbjct 3993 TCCATGAAATCAAAGGGATTGGTCACATTGTAGTGCTTCTTGTTTCCAAGGGCAACGAGG 4052
Query 33133 AATCTATCCGCGACGAATTCTATATATGTTTTCATCATTTCACAATTCATTCCTATAAGT 33192
| ||||| || ||||| || || ||| ||||| | | |||||||| | ||
Sbjct 4053 AGCCTATCAGCAACGAACTCGATGTATTGACACATCAGCTTCGAGTTCATTCCGAGCAGA 4112
Query 33193 TTAACTGGAAGAGCCGCAGTAAGAAATTCTTGTTCAATGGATACCGCATCTGTTATAATA 33252
||||||||| ||| | || | || ||||| ||||| | || || || || ||||||
Sbjct 4113 GAAACTGGAAGGGCCTCGGTTAAGAACTCTTGCTCAATTGCAACAGCGTCAGTGATAATA 4172
Query 33253 GATCTAACGGTTTCTTCACTCGGTGGATGCAATAAATGTTTAAACATCAAACATGCGAAA 33312
| | | || | || || | || || ||| |||| | || || ||
Sbjct 4173 TCTTGGATGACCTCCTTGCTGGGGCGGTGGTTTAGATGGGAGAACAAGAGGCAGGCAAAG 4232
Query 33313 TCGCAGTGCAGACCCTCGTCTCTACTAATTAGTTCGTTGGAAAACGTGAGTCCGGGCATT 33372
||| |||||| |||||||| | ||| || || || || || || | |||||||||
Sbjct 4233 TCGGTGTGCAGGCCCTCGTCACGCGAAATCAGCTCATTTGAGAATGTCAATCCGGGCATC 4292
Query 33373 AGGCCACGCTTTTTAAGCCAAAATATGGAAGCGAATGATCCAGAAAAGAAGATTCCTTCT 33432
| ||| ||||| || | ||| || |||||||| ||||| || || || ||||| || ||
Sbjct 4293 AAGCCGCGCTTCTTCAACCAGAAGATGGAAGCAAATGAACCTGAGAAAAAGATACCCTCG 4352
Query 33433 ACTGCAGCAAAGGCAATAAGTCTCTCTCCATAA-CCGGCGC--TGTCATGTATCCACTTT 33489
|| ||||| ||||| | |||| | || || || | | |||| || ||||| |
Sbjct 4353 ACGGCAGCGAAGGCCACCAGTCGTTGGGCAAAAGTCGACTCCTTGTCCTGGATCCAATGA 4412
Query 33490 TGAGCCCAATCGGCCTTCTT 33509
|||||||| ||||||||
Sbjct 4413 ATGGCCCAATCAGCCTTCTT 4432
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 622879688097200
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |