Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Elaphomyces_20granulatus_20[genbank_20GCA_5F002240705.1_202017-08- 04] 8,670 sequences; 54,153,615 total letters Query= NC_007383.1 Length=134394 Score E Sequences producing significant alignments: (Bits) Value seq6412 98.7 9e-16 >seq6412 Length=17604 Score = 98.7 bits (108), Expect = 9e-16 Identities = 142/198 (72%), Gaps = 2/198 (1%) Strand=Plus/Minus Query 23991 ATGCAAGTGTTTGTAAAAACATTAACTGGAAAATCGATTACCATCGAAGTCGAGGCCAAC 24050 |||||| | || || || || ||||||| || ||||||| | ||||||||| | Sbjct 16714 ATGCAAATTTTCGTCAAGACCCTAACTGGGAAGACGATTACGCTAGAAGTCGAGTCGTCA 16655 Query 24051 GACACCATCGAGCAAGTCAAACAAAAGATTACCGACAAAGAAGGCATACCTCCCGATCAA 24110 ||||| ||||| | ||||| ||| || || || || || || || ||||| || Sbjct 16654 GACACGATCGATAATGTCAAGTCAAAAATCCAAGATAAGGAGGGTATCCCCCCCGACCAG 16595 Query 24111 CAGAGACTGATTTACGGCGGCAAGCAACTCGAAGATGACAGAAACGTCAGC-GATTATAA 24169 || | |||| | || || |||||||| ||||||| ||||| ||| | | |||||||| Sbjct 16594 CAACGGTTGATCTTCGCTGGGAAGCAACTAGAAGATGGCAGAA-CGTTATCTGATTATAA 16536 Query 24170 CATTCAAAAAGAATCTAC 24187 || ||||||||||| || Sbjct 16535 TATCCAAAAAGAATCGAC 16518 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 429890570543850