Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Elaphomyces_20granulatus_20[genbank_20GCA_5F002240705.1_202017-08-
04] 8,670 sequences; 54,153,615 total letters
Query= NC_008518.1
Length=174059
Score E
Sequences producing significant alignments: (Bits) Value
seq5240 129 7e-25
>seq5240
Length=8030
Score = 129 bits (142), Expect = 7e-25
Identities = 231/333 (69%), Gaps = 6/333 (2%)
Strand=Plus/Plus
Query 92924 CTATCAGCTACAAATTCTATGTACTGAGACATCAAATCACAATTCATTCCTAGAAGACGT 92983
|||||||| || || || ||||| ||| |||||| | | |||||||| || |||
Sbjct 4056 CTATCAGCAACGAACTCGATGTATTGACACATCAGCTTCGAGTTCATTCCGAGCAGAGAA 4115
Query 92984 ACAGGTAGAGCGTCGGTCAAGAAATCTTTCTCGATTACAACGGCTTCTTTCAAGATTTCT 93043
|| || || || ||||| ||||| |||| ||| ||| |||| || || | | || |||
Sbjct 4116 ACTGGAAGGGCCTCGGTTAAGAACTCTTGCTCAATTGCAACAGCGTCAGTGATAATATCT 4175
Query 93044 ---ATTACTCTACTATTTGGTGGTTTTTGTACGACATAATTGTACATTAAGCACGCAAAG 93100
|| || || || ||| || | || | || | ||| | ||| ||||||
Sbjct 4176 TGGATGAC-CTCCTTGCTGG-GGCGGTGGTTT-AGATGGGAGAACAAGAGGCAGGCAAAG 4232
Query 93101 TCGGTATGTAAACCTTCGTCTCGTGATATCAACTCATTGCTGAATGTTAAACCTGGTAAC 93160
||||| || | || ||||| || || |||| |||||| |||||| || || || | |
Sbjct 4233 TCGGTGTGCAGGCCCTCGTCACGCGAAATCAGCTCATTTGAGAATGTCAATCCGGGCATC 4292
Query 93161 AGTCCTCGTTTCTTGAGCCAAAATATTGAAGCAAAACTACCAGaaaaaaaTATACCTTCC 93220
| || || ||||| | ||| || || |||||||| ||| || ||||| ||||| ||
Sbjct 4293 AAGCCGCGCTTCTTCAACCAGAAGATGGAAGCAAATGAACCTGAGAAAAAGATACCCTCG 4352
Query 93221 ACGGCTGCAAATGCCACAATACGTTCGGCAAAA 93253
||||| || || ||||| | |||| |||||||
Sbjct 4353 ACGGCAGCGAAGGCCACCAGTCGTTGGGCAAAA 4385
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 556800450210800
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |