Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Elaphomyces_20granulatus_20[genbank_20GCA_5F002240705.1_202017-08-
04] 8,670 sequences; 54,153,615 total letters
Query= NC_008586.1
Length=131204
Score E
Sequences producing significant alignments: (Bits) Value
seq6412 100 2e-16
>seq6412
Length=17604
Score = 100 bits (110), Expect = 2e-16
Identities = 141/198 (71%), Gaps = 0/198 (0%)
Strand=Plus/Minus
Query 22218 GATGCAAATTTTTGTTAAAACTTTAACCGGTAAAACGGTCACTCTTGAAGTGGAAACCAC 22277
|||||||||||| || || || |||| || || ||| | || || ||||| || | |
Sbjct 16715 GATGCAAATTTTCGTCAAGACCCTAACTGGGAAGACGATTACGCTAGAAGTCGAGTCGTC 16656
Query 22278 CGATACCGTGGACGATATCAAACAAAAAATTCAAGACAAGGAGGGTATTCCACCCGATCA 22337
|| || | || || |||| |||||| ||||| ||||||||||| || ||||| ||
Sbjct 16655 AGACACGATCGATAATGTCAAGTCAAAAATCCAAGATAAGGAGGGTATCCCCCCCGACCA 16596
Query 22338 ACAACGTCTTATATTTGCCGGCAAACAGTTAGAGGATCACCGCACCGTCTCCGATTACAA 22397
||||| | || || || || || || |||| ||| | | || | || ||||| ||
Sbjct 16595 GCAACGGTTGATCTTCGCTGGGAAGCAACTAGAAGATGGCAGAACGTTATCTGATTATAA 16536
Query 22398 CATTCAAAAAGAATCCAC 22415
|| ||||||||||| ||
Sbjct 16535 TATCCAAAAAGAATCGAC 16518
Score = 95.1 bits (104), Expect = 1e-14
Identities = 139/197 (71%), Gaps = 0/197 (0%)
Strand=Plus/Minus
Query 22219 ATGCAAATTTTTGTTAAAACTTTAACCGGTAAAACGGTCACTCTTGAAGTGGAAACCACC 22278
||||||||||| || || || |||| || || ||| | || || ||||| || | |
Sbjct 16942 ATGCAAATTTTCGTCAAGACCCTAACTGGGAAGACGATTACGCTAGAAGTTGAGTCATCA 16883
Query 22279 GATACCGTGGACGATATCAAACAAAAAATTCAAGACAAGGAGGGTATTCCACCCGATCAA 22338
||||| | || || ||||| ||| || || || |||||||| || || ||||| ||
Sbjct 16882 GATACGATCGATAATGTCAAATCAAAGATCCAGGATAAGGAGGGCATCCCCCCCGACCAG 16823
Query 22339 CAACGTCTTATATTTGCCGGCAAACAGTTAGAGGATCACCGCACCGTCTCCGATTACAAC 22398
||||| | || ||||| || ||||| | ||||| ||| || | || ||||| ||
Sbjct 16822 CAACGGTTGATCTTTGCTGGGAAACAACTGGAGGACGGCCGGACGCTGTCTGATTATAAT 16763
Query 22399 ATTCAAAAAGAATCCAC 22415
|| || ||||| || ||
Sbjct 16762 ATCCAGAAAGAGTCTAC 16746
Score = 82.4 bits (90), Expect = 6e-11
Identities = 86/113 (76%), Gaps = 0/113 (0%)
Strand=Plus/Minus
Query 22303 AAAATTCAAGACAAGGAGGGTATTCCACCCGATCAACAACGTCTTATATTTGCCGGCAAA 22362
|| ||||| ||||||||||| || || || || ||||| || | |||||||| |||||
Sbjct 17086 AAGATTCAGGACAAGGAGGGCATCCCCCCTGACCAACAGCGGTTGATATTTGCTGGCAAG 17027
Query 22363 CAGTTAGAGGATCACCGCACCGTCTCCGATTACAACATTCAAAAAGAATCCAC 22415
|| | |||||| ||| || | || ||||||||||| || || || |||||
Sbjct 17026 CAACTGGAGGATGGCCGGACGTTATCTGATTACAACATACAGAAGGAGTCCAC 16974
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 419683649178550
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |