Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Elaphomyces_20granulatus_20[genbank_20GCA_5F002240705.1_202017-08-
04] 8,670 sequences; 54,153,615 total letters
Query= NC_009127.1
Length=295146
Score E
Sequences producing significant alignments: (Bits) Value
seq5240 174 3e-38
>seq5240
Length=8030
Score = 174 bits (192), Expect = 3e-38
Identities = 349/514 (68%), Gaps = 5/514 (1%)
Strand=Plus/Minus
Query 42633 CCCTGCATCAAGAAGAAGGCGGACTGGGCGCTCAACTGGATCGAGAGTCCCGACGCAACG 42692
||||||||| |||||||| || ||||| | | |||||| || || | ||
Sbjct 4444 CCCTGCATCCGTAAGAAGGCTGATTGGGCCATTCATTGGATCCAGGACAAGGAGTCGACT 4385
Query 42693 TTCGGCGAGAGGCTGGTAGCCTTTACCGCCGTCGAGGGCATCTTCTTCTCGGGCGCCTTC 42752
|| | | | | ||||| ||||| | ||||||||||| ||||| ||||| || | ||
Sbjct 4384 TTTGCCCAACGACTGGTGGCCTTCGCTGCCGTCGAGGGTATCTTTTTCTCAGGTTCATTT 4325
Query 42753 GCCTCCATCTTCTGGCTCAAGCAGAAGGTGTCGATGCCCGGACTCACCTTCTCGAACGAA 42812
|| |||||||||||| | ||| || | | |||||||||| | || ||||| || ||
Sbjct 4324 GCTTCCATCTTCTGGTTGAAGAAGCGCGGCTTGATGCCCGGATTGACATTCTCAAATGAG 4265
Query 42813 CTCATCAGCAGGGACGAGGGGCTGCATAGGGACTTTGCCTGCCTCCTGTTCTCGAGCCAC 42872
|| || | |||||||| ||||| | ||||||||||||||| ||||||| |||
Sbjct 4264 CTGATTTCGCGTGACGAGGGCCTGCACACCGACTTTGCCTGCCTCTTGTTCTC---CCAT 4208
Query 42873 CTCAGGCACAAGCCCTCGAAGGAGCGGGTCCGGGCCATCATCACGGAGGCCGTGGAGATC 42932
|| | ||| ||| |||||| ||| | || ||||| || || || | ||
Sbjct 4207 CTAAACCACCGCCCCAGCAAGGAGGTCATCCAAGATATTATCACTGACGCTGTTGCAATT 4148
Query 42933 GAGAAGGAGTTCCTCACGCAGTCGCTGCCCGTGTCCCTGGTCGGCATGAACCACGACCTC 42992
||| | |||||| | || || | || || || || ||| |||| |||||| | ||
Sbjct 4147 GAGCAAGAGTTCTTAACCGAGGCCCTTCCAGTTTCTCTGCTCGGAATGAACTCGAAGCTG 4088
Query 42993 ATGTGCAAGTACATCCAGTACGTCGCCGACCATCTCCT-GTGCCAGATGGGTCTCAGCCG 43051
||||| | |||||| ||| ||| || || ||||| || | ||| || |
Sbjct 4087 ATGTGTCAATACATCGAGTTCGTTGCTGATAGGCTCCTCGTTGCCCTTGGAAACAAGAAG 4028
Query 43052 CCTCTACAACACGCCGTGCCCCTTCGACTTTATGGAGAACATCTCGTTGGAGGGCAAGAC 43111
| |||||| | | ||||| || || ||||| | || || |||| || || ||
Sbjct 4027 -CACTACAATGTGACCAATCCCTTTGATTTCATGGAAAGTATATCTTTGGCTGGTAAAAC 3969
Query 43112 CAACTTTTTCGAGAAGCGCGTCGCCGACTACCAG 43145
|||||| ||||||||||| |||| |||||| |||
Sbjct 3968 CAACTTCTTCGAGAAGCGTGTCGGCGACTATCAG 3935
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 944236857239200
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |